Cucsa.115660.2 (mRNA) Cucumber (Gy14) v1

Overview
NameCucsa.115660.2
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
Descriptionnucleotide-sensitive chloride conductance regulator (ICln) family protein
Locationscaffold00988 : 240439 .. 245172 (+)
Sequence length1081
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATGATCTAAGTTCTAACCATTTCCTTTTAATTGAGTGAAAAAGAGAAAAGGTTGGATAATCCAAAGGGACATTGAAAGAAAGAGTGTTAGGGTTTTAAACACAGAGGTAGTGAAGAAGAAGAATTAAGGAATTAGGGTTTTAGACAGAATGACAATGGGACTAAGGCCTTACACCCAGAGAACTGGCAATGGCTTGGGATCGCCTTCTTTCGACGTTGATCAAGGCGAGGTTCTCATGCACGTATTGCCGGCTGTCGGCATCGTATTCGATAATCGGCCTCCCGAGTTCCCCGGCACTCTCTACATCTCCTCCAGGTATCTTCCGCTTCATTTCGTTCCATACTCTCTGTTTTAGTGTAAGAAAATTTCGAGAATTAGGACCCCTTTTGTGTGGGGAGCTTCTATTTTATTGTTTTTTTTtAAatAAAAAaGAAGTTGATATTTtGTTAAGCGAGTGGAGAGGGTGTGTTGTGCTCTTCTTTTATAAACGAAGGCCGTTTCTGAATCTTTGGATGAATAGTGTGCTGAATTTGGTAATGAAATGATCGATTGTGGGAATTTGGTGCGAGTATGAGAAAGAAAATGGTTGTGGGTTGAGTTAAGAGGATTGGGAGTACTCTTGAGCTAAAGGAGATTAAGACAAAGGGGgAAATTAAGAATGAACACTGAAAAATTCCTAGAAGGGAAAATGCCGTGGGAAGTGTTGATTGCAGTCGAAACAGGGGGGAAAGAGGTACATTCCTTTGATGTCATTGTTTTTtAAGGCTCAAAAAAGTACGATTTCTTATCTATCTTGTTTGATGTGTTTCCATTCTCGGTGAGAGGTCTTCATTTTCTACATGTGCCTTTTCCTGAACAGTCGACATGATAGTGTCTTCTTTTTCAATGATTTGTTGGTTATCTCTTTAGATTTAATGTTAGAGTTTGCAGGTGGTTACTGTGTAGGCTTGCAATTGGGAAATTAGGATAGAAAGGACATCTGCAAATGTAGAGTGTGCCGGGACTTCTAAGTTCTCTTTAAGCTCTTTTGTAGTCACGATATACCTTTTTtAAGTTAATGCCAATTAAATGGATTTTTtGTCATAATACTTAATTGTAGGTGTGGGAGGTTATTAGGTTTAATGTATCTTTTGTGTTTCCCTTCCTTCGTTAGCTTTTGTAACCATCAGCTCCGCGTTGTCTAATTCTTTTATGGTTGTAAGCCCTTCTTGATGTTAGTTTTGGGATTCGCTTTCTGGGATTGTTTGAGTTTGGTCTAATTCTTTTTGGGTTAGAGTCCCATATTAACGCTAGTTTTGAGATTCTTTGTTTGGGTTGTTTTTTGTATGTTCTTGGACGTACTTCATTTTCGTCAGTATGAAAGCTCAGTTTCTAACTATATATATGTATTAATTGTCTATTTTTTAATTGAACACGTCCTACAAAAAAaGAAAAAAAAaCTAATTGACCAACTTGCTGACTCATTGAGAACCTGATCATGTTTGTAGGCAAGTGGTTTGGTTGAGTGATGTGATCATGGCAAAAGGTTATGCAGTTGATTTTCTGTCCATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATACATCTCCTTGTTTGTATGTTCAGGTATTTACTTGTGCAGTTTTACATTATTCTCATTAATGTTGTATCGTTAAACAGATTCATTAGCAAAAAAGAGTAAGGATTGAGAGATGTGAATTCAAATTACTTGCTGTCTTATCCATAAAAAAGTTCCAGACATAGTAGAGGTAGGGTTGATGAGGAACAGTTGTAGATATCAAGGAGATAAGTTTCACGAGGGTGATGTGACCATGAAGATGCAAGATCCAAACTCGAATTTGAATCAGTATAATCAGCTTTTACAATCCAGTTGTAGATAGGGGTTTCTTCATTTTGCTGTATTAATGGAAACCAATGAGGTGGGATTGTGGCAGTTTTCTTGGAGGAATAAGTTTGGGACTTGGGGTTAGTTTGCCTTTGTGATTCATGGGTAGAACAGTATGTTTAGTGTGCTGTTGGGATTCAAGTTGGAATTGGATAGATGAAAAAAaGAAATATCTATTTTTtCATTAGTGTACCTGATTTTTCTTTGGAGAAACTATTGGATCCTTCACACTTTGAGGACAAGGTGTGTTTTAATGGTTGGTTAATCTGAGCCCATCGGGCTTCAGGAAAATGTTACAGGCAGTTTAGTAATCAACTAAAAAGTTTGTTAGTAGGGGCCAAAAGGTGGTCACAATTGGATAGGTGGGTGAGGAGCATGAAAGCAAGCAATATCTATTTGTTTGGGCTTGGACATTCAGGAGAGGTGTATATACTTAGATTAGGAAGCAAGGCTCCAAGTCAAAATATCTTCTGTATGGTAGAAGGAGACTTAGATAACCTTCTATAATTAGCTAGTCATAACTTGGTACCATAGTTTAGCAAGGTCGGCTTATTAATTATAGGAGTGTGGGACTTGGTCTCCCTTGAAAAGTGGAGACTGGAAACTTTGTTTATAGTTTGTAACTATAAGTGTGGGAGAACACTAACTTGTGAAAGCATCCCATTCTTCGCAAACTCACTCTCTCTTGTGTAAACTAAACGAGGTAGAACACGATGGCAAAGCATTCATCCATTCCACCCTCAAGTGTCGGACACATCCGAGGTCATGCAGTCACAATAGTTCCTTTCTTAGCCTCCCTGAATAGGAACTAGGAGCCACCTTTCCTTGGTATAGACCAGCCTGAACAACATTACAAGGAATTTATAGGCATCATATCTGGTTGCACATGTACTCTACCCCCGTCCCCGTCTATGATCTCACATGCAAGCAACTAGCGTCAATATATCAAACAAATCAATCTCATTTGGGATCAGGCTCTTGTTCTTGACAATCACTTTTTTTAAGGCGTGTAATCTACGCACATTCACATAGATCCACCCCATGTCCTATGAGATAGAATTGGGGCCGTGTGGAGCTTTGGACGCCTTGGTCAATCCAACATCTGTCCAAATGCTGTCGAAGTTCAACCAACTCCCATGGAGACACAAGATATTGTACTTTGGATGGGGGCTCGACCCCAAGTTCAAGATCTATCTTATGGTCGATGTTGTTGAAACCGAAGGGAGAAAGAGTTTTAGATAACTTTAGAGGCATTACATCATCATTATCCCGAAGAACTCTGGCCACAACTTTGGGCACTTCCACAAACTTAACTAGATTAATCTCATTCAAGGTGGCAAGGTGGGACTAGGAAACGTTTCTACATAGATTTTTCTTTTAAAAATTTTGGACGTTAAATTTCCATGTTTGTATACTTTGAAGGACTATTATACACATATATTTTTAAAAGATAACTAAAGATCACATGCCCTAAAACCCGTCTATGACCTACTTTTTCAGAAATGAACATGTCACCATGTTCATAACATGTTAAATCTATGCCCCATGTACGTGCCCATGCTTCTTATGATGCATGTTTATCATACTTGCTTGTATACATTCCAACTTTTTGAGAAATCCATGAGAAACATTTGATAAAAAATAGTTGTTTCCTATCTAGCAGTGTAATTAAAGCTTGCATAAAATTCTTGCTCAACTATCTGCTTGTAGGCACTGTTTTTTtCTGGTCCTTTATATTTTTTtAATAACATTTGCCAAAAGCTTTTATTTCGCCTGCATTTCCTTTGCTGATTGTGTTTGAAGATTGATACCGGGGATGATGAAGAGTTAGAGAATTCAGATTCAGAATGTCATGGTGAAGAGTCTGAGAATTTTGACTTAGCTGCAGTTAGAGAGATGAGGCTTGTACCTTCGAATCCTAACGAATGTATGTCTCTCCTCTTTTTTGATTGATTGTGAAATGTTATTGGAGTGTAGAATAATCTTTACTTTTTTATTATTATTTTTTtGCTATAGTAGAAACTCTGTTCGAGATATTCTGTCAGTGTGCTGAGCTTAATCCTGAACCAACTGGAGGTTAGTTCACTTTCATAATTGACCTCGGTTTCTATTTTCATACAACTAGTTGGTtTTTTtGGTATGAACTACCTGCTTCCTTCAGATGAAGAAGAAGAAGAGCACAACTGGTTTTTtGGTGCCGATCAGTTGGAACAGATGCCAGGTATGTAATCAATTAGATTGTGTGATTCTTCTGAAGAACCACTTGTTACAGATGATATAAAATTCATCTTCTGTAATATTTAGGACTTTCAGTAGCAGGAGATGACGAAGAACAATTCTCCTCTATTCCACCAAGTTCGATCGGCCACTCAAATGGAGATCATGATCAACTAGCTCGCACAGTGCTTCAGGTATGTTCATAAACGCATATCCCATCTACTAAAGTCTTCATTAGCAAACTCAATGAACATATTtTTTATTtTtGTtTTTGGCCTTTTTTCTTTCTATTGGTTTTCTGAGTGCTTTTGTTGCGTAATGTTTAGCTTCAAATCAATGATCGACGTTTTGAGGACGCAGATGAGATGGAACCTGAAAaCAaTGGTAAGCATTGTTAGAGCTTGTACCTTAAGAATCAGACTGTTCTGTTGTAAAACTAAACCCCTGCTGTATATGCAATTTTtGCGATCCGCATCAGTCAGATTAAATTTTAGGCACTTAGTTTTCCTTTGTAGTTTCTACTGCCTTGCTTAATTGACTTGCTAGAATTTGGATTCTTAAATCATCATACTAAAGTGAGTTTGGATTTATGCTGTGTTTGGTTTTCCATATTTTAAAGAGTAG

mRNA sequence

AGATGATCTAAGTTCTAACCATTTCCTTTTAATTGAGTGAAAAAGAGAAAAGGTTGGATAATCCAAAGGGACATTGAAAGAAAGAGTGTTAGGGTTTTAAACACAGAGGTAGTGAAGAAGAAGAATTAAGGAATTAGGGTTTTAGACAGAATGACAATGGGACTAAGGCCTTACACCCAGAGAACTGGCAATGGCTTGGGATCGCCTTCTTTCGACGTTGATCAAGGCGAGGTTCTCATGCACGTATTGCCGGCTGTCGGCATCGTATTCGATAATCGGCCTCCCGAGTTCCCCGGCACTCTCTACATCTCCTCCAGGCAAGTGGTTTGGTTGAGTGATGTGATCATGGCAAAAGGTTATGCAGTTGATTTTCTGTCCATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATACATCTCCTTGTTTGTATGTTCAGATTGATACCGGGGATGATGAAGAGTTAGAGAATTCAGATTCAGAATGTCATGGTGAAGAGTCTGAGAATTTTGACTTAGCTGCAGTTAGAGAGATGAGGCTTGTACCTTCGAATCCTAACGAATTAGAAACTCTGTTCGAGATATTCTGTCAGTGTGCTGAGCTTAATCCTGAACCAACTGGAGATGAAGAAGAAGAAGAGCACAACTGGTTTTTTGGTGCCGATCAGTTGGAACAGATGCCAGTAGCAGGAGATGACGAAGAACAATTCTCCTCTATTCCACCAAGTTCGATCGGCCACTCAAATGGAGATCATGATCAACTAGCTCGCACAGTGCTTCAGCTTCAAATCAATGATCGACGTTTTGAGGACGCAGATGAGATGGAACCTGAAAACAATGGTAAGCATTGTTAGAGCTTGTACCTTAAGAATCAGACTGTTCTGTTGTAAAACTAAACCCCTGCTGTATATGCAATTTTTGCGATCCGCATCAGTCAGATTAAATTTTAGGCACTTAGTTTTCCTTTGTAGTTTCTACTGCCTTGCTTAATTGACTTGCTAGAATTTGGATTCTTAAATCATCATACTAAAGTGAGTTTGGATTTATGCTGTGTTTGGTTTTCCATATTTTAAAGAGTAG

Coding sequence (CDS)

ATGACAATGGGACTAAGGCCTTACACCCAGAGAACTGGCAATGGCTTGGGATCGCCTTCTTTCGACGTTGATCAAGGCGAGGTTCTCATGCACGTATTGCCGGCTGTCGGCATCGTATTCGATAATCGGCCTCCCGAGTTCCCCGGCACTCTCTACATCTCCTCCAGGCAAGTGGTTTGGTTGAGTGATGTGATCATGGCAAAAGGTTATGCAGTTGATTTTCTGTCCATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATACATCTCCTTGTTTGTATGTTCAGATTGATACCGGGGATGATGAAGAGTTAGAGAATTCAGATTCAGAATGTCATGGTGAAGAGTCTGAGAATTTTGACTTAGCTGCAGTTAGAGAGATGAGGCTTGTACCTTCGAATCCTAACGAATTAGAAACTCTGTTCGAGATATTCTGTCAGTGTGCTGAGCTTAATCCTGAACCAACTGGAGATGAAGAAGAAGAAGAGCACAACTGGTTTTTtGGTGCCGATCAGTTGGAACAGATGCCAGTAGCAGGAGATGACGAAGAACAATTCTCCTCTATTCCACCAAGTTCGATCGGCCACTCAAATGGAGATCATGATCAACTAGCTCGCACAGTGCTTCAGCTTCAAATCAATGATCGACGTTTTGAGGACGCAGATGAGATGGAACCTGAAAaCAaTGGTAAGCATTGTTAG

Protein sequence

MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVWLSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESENFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPVAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC*
Homology
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BLAST of Cucsa.115660.2 vs. Swiss-Prot
Match: ICLN_ARATH (Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g62290 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.5e-68
Identity = 134/233 (57.51%), Postives = 165/233 (70.82%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M  GLR +T RT +G G P  D   GE LMHV  +V +   NRP E PGTLYI+SR+++W
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120
           LSDV MAKGYAVDFLS+SLHAVS DPEAY+SPC+Y QI+  +DE     D E   E +E 
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDE-----DDESDSESTEV 120

Query: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEE-HNWFFGADQLEQMPV 180
            DL+ +REMRLVPS+  +LETLF++FC+CAELNPEP  +EEEE  HNW F ADQ++    
Sbjct: 121 LDLSKIREMRLVPSDSTQLETLFDVFCECAELNPEPVQEEEEESGHNWVFSADQMDVRGG 180

Query: 181 AGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGK 233
             D E Q S  P S IGHSNGD + L + +L+LQIND+RFEDA+EM  E+  K
Sbjct: 181 DDDAEWQISQSPTSVIGHSNGD-EGLNQPMLELQINDQRFEDAEEMVHESETK 227

[Close]
BLAST of Cucsa.115660.2 vs. Swiss-Prot
Match: ICLN_MOUSE (Methylosome subunit pICln OS=Mus musculus GN=Clns1a PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.4e-15
Identity = 42/118 (35.59%), Postives = 71/118 (60.17%), Query Frame = 1 

Query: 49  GTLYISSRQVVWLSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELEN 108
           GTLYI+  ++ WL       G+++++ ++SLHAVS DP AY    LYV ++    EE + 
Sbjct: 35  GTLYIAESRLSWLDG--SGLGFSLEYPTISLHAVSRDPNAYPQEHLYVMVNAKLGEESKE 94

Query: 109 SDSECHGEESENFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHN 167
             S+   +E +N D+  + E R VPS+ + LE +F   C+C  L+P+P  DE+ ++++
Sbjct: 95  PPSD--EDEEDNDDIEPISEFRFVPSDKSALEAMFTAMCECQALHPDPE-DEDSDDYD 147

[Close]
BLAST of Cucsa.115660.2 vs. Swiss-Prot
Match: ICLN_RAT (Methylosome subunit pICln OS=Rattus norvegicus GN=Clns1a PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 42/118 (35.59%), Postives = 71/118 (60.17%), Query Frame = 1 

Query: 49  GTLYISSRQVVWLSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELEN 108
           GTLYI+  ++ WL       G+++++ ++SLHAVS DP AY    LYV ++    EE + 
Sbjct: 35  GTLYIAESRLSWLDG--SGLGFSLEYPTISLHAVSRDPNAYPQEHLYVMVNARFGEESKE 94

Query: 109 SDSECHGEESENFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHN 167
             S+   +E +N D+  + E R VPS+ + LE +F   C+C  L+P+P  DE+ ++++
Sbjct: 95  PFSD--EDEDDNDDVEPISEFRFVPSDKSALEAMFTAMCECQALHPDPE-DEDSDDYD 147

[Close]
BLAST of Cucsa.115660.2 vs. Swiss-Prot
Match: ICLN_RABIT (Methylosome subunit pICln OS=Oryctolagus cuniculus GN=CLNS1A PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13
Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 1 

Query: 49  GTLYISSRQVVWLSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELEN 108
           GTLYI+  ++ WL       G+++++ ++SLHAVS DP AY    LYV ++    E  E+
Sbjct: 35  GTLYIAESRLSWLDG--SGLGFSLEYPTISLHAVSRDPNAYPQEHLYVMVNAKFGE--ES 94

Query: 109 SDSECHGEESENFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHN 167
            +     EE  + D+  + E R VP + + LE +F   C+C  L+P+P  DE+ ++++
Sbjct: 95  KELVADEEEDSDDDVEPISEFRFVPGDKSALEAMFTAMCECQALHPDPE-DEDSDDYD 147

[Close]
BLAST of Cucsa.115660.2 vs. TrEMBL
Match: A0A0A0KPP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 5.9e-133
Identity = 234/237 (98.73%), Postives = 234/237 (98.73%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120
           LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMP-- 180
           FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMP  
Sbjct: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPGL 180

Query: 181 -VAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC 235
            VAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC
Sbjct: 181 SVAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC 237

[Close]
BLAST of Cucsa.115660.2 vs. TrEMBL
Match: M5X213_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010981mg PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.3e-75
Identity = 152/233 (65.24%), Postives = 176/233 (75.54%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTG-NGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVV 60
           M  GLR +T R   NG+  P  D + GE LMHV P V IV  NRPPE PGTLYIS+++VV
Sbjct: 1   MVAGLREFTARVERNGVDEPVLDAENGEELMHVQPCVSIVLGNRPPESPGTLYISTKKVV 60

Query: 61  WLSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDE-ELENSDSECHGEES 120
           WLSDV  AKGYAVDFLS+SLHAVS DPEAYTSPC+Y QI+T DDE E + SDSEC+G   
Sbjct: 61  WLSDVDRAKGYAVDFLSISLHAVSRDPEAYTSPCIYTQIETEDDEHESDGSDSECNGV-- 120

Query: 121 ENFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMP 180
              DL+ + EMRLVPS+PN+L++LFE+FC+CAELNPEP  +EEEEEHNW F ADQLE   
Sbjct: 121 --LDLSKITEMRLVPSDPNQLDSLFEVFCECAELNPEPI-EEEEEEHNWIFSADQLEDDA 180

Query: 181 VAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNG 232
              D E   S  P  SIG SNGDHD LARTVL+LQIND+RFEDA+EME EN+G
Sbjct: 181 TGEDSEWHVSENP--SIGQSNGDHD-LARTVLELQINDQRFEDAEEMEHENDG 225

[Close]
BLAST of Cucsa.115660.2 vs. TrEMBL
Match: A0A061G066_THECC (Nucleotide-sensitive chloride conductance regulator (ICln) family protein OS=Theobroma cacao GN=TCM_047012 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.4e-72
Identity = 143/235 (60.85%), Postives = 174/235 (74.04%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M +GLR +  R GNG G P  D D  E L+HV P+V I   NR PE PGTLYI+++QV+W
Sbjct: 1   MVIGLRQFMARVGNGAGEPVLDTDNVEELVHVQPSVSIALGNRAPESPGTLYITTKQVIW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEEL-ENSDSECHGEESE 120
           LSDV  AKGYAVDFLS+SLHAVS DPEAY SPC+Y QI+T  DE++ E+SDSEC    +E
Sbjct: 61  LSDVDSAKGYAVDFLSLSLHAVSRDPEAYHSPCIYTQIETEADEDVSEDSDSEC----NE 120

Query: 121 NFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPV 180
             DL+ V EMRL+PS+ ++L+TLF++FC+CAELNPEP  + EEE HNW F ADQLE    
Sbjct: 121 VLDLSKVTEMRLIPSDASQLDTLFQMFCECAELNPEPI-EGEEEGHNWVFSADQLEDEAA 180

Query: 181 AGDDEE-QFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 234
            GDD E  F   P +SIGHSNGDHD LARTVL+LQIND+RFEDA+E E  ++  H
Sbjct: 181 EGDDSEWHFPQNPTNSIGHSNGDHD-LARTVLELQINDQRFEDAEEFEQVSDSSH 229

[Close]
BLAST of Cucsa.115660.2 vs. TrEMBL
Match: A0A0D2PW21_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G237900 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.8e-72
Identity = 141/237 (59.49%), Postives = 175/237 (73.84%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M +GLR +T R GNG G P  D D GE L+HV P+V +   +R PE PGTLYI++RQV+W
Sbjct: 1   MAVGLRHFTARAGNGSGEPILDTDNGEELVHVQPSVSVAVGDRAPESPGTLYITTRQVIW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDE---ELENSDSECHGEE 120
           LS++   KGYAV FLS+SLHAVS DPEAY SPC+Y QI+T  DE   E E+SDSEC    
Sbjct: 61  LSELDREKGYAVYFLSLSLHAVSRDPEAYPSPCIYTQIETEADEVEDESEDSDSEC---- 120

Query: 121 SENFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQM 180
           SE  DL+ +REMR +PS+ N+L+TLF++FC+CAELNPEP  + EEE HNW F ADQLE  
Sbjct: 121 SEVLDLSKIREMRFIPSDANQLDTLFQVFCECAELNPEPIEEGEEEGHNWIFSADQLEDE 180

Query: 181 PVAGDDEE-QFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 234
             AGDD E  FS  P ++IGHSNG HD LA +VL+LQIND+RFEDA+EME +++  H
Sbjct: 181 AGAGDDVEWHFSQNPTNTIGHSNGHHD-LASSVLELQINDQRFEDAEEMEQDSDTGH 232

[Close]
BLAST of Cucsa.115660.2 vs. TrEMBL
Match: A0A0D2NDI1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G237900 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.8e-72
Identity = 141/237 (59.49%), Postives = 175/237 (73.84%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M +GLR +T R GNG G P  D D GE L+HV P+V +   +R PE PGTLYI++RQV+W
Sbjct: 1   MAVGLRHFTARAGNGSGEPILDTDNGEELVHVQPSVSVAVGDRAPESPGTLYITTRQVIW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDE---ELENSDSECHGEE 120
           LS++   KGYAV FLS+SLHAVS DPEAY SPC+Y QI+T  DE   E E+SDSEC    
Sbjct: 61  LSELDREKGYAVYFLSLSLHAVSRDPEAYPSPCIYTQIETEADEVEDESEDSDSEC---- 120

Query: 121 SENFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQM 180
           SE  DL+ +REMR +PS+ N+L+TLF++FC+CAELNPEP  + EEE HNW F ADQLE  
Sbjct: 121 SEVLDLSKIREMRFIPSDANQLDTLFQVFCECAELNPEPIEEGEEEGHNWIFSADQLEDE 180

Query: 181 PVAGDDEE-QFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 234
             AGDD E  FS  P ++IGHSNG HD LA +VL+LQIND+RFEDA+EME +++  H
Sbjct: 181 AGAGDDVEWHFSQNPTNTIGHSNGHHD-LASSVLELQINDQRFEDAEEMEQDSDTGH 232

[Close]
BLAST of Cucsa.115660.2 vs. TAIR10
Match: AT5G62290.1 (AT5G62290.1 nucleotide-sensitive chloride conductance regulator (ICln) family protein)

HSP 1 Score: 260.0 bits (663), Expect = 1.4e-69
Identity = 134/233 (57.51%), Postives = 165/233 (70.82%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           M  GLR +T RT +G G P  D   GE LMHV  +V +   NRP E PGTLYI+SR+++W
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120
           LSDV MAKGYAVDFLS+SLHAVS DPEAY+SPC+Y QI+  +DE     D E   E +E 
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDE-----DDESDSESTEV 120

Query: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEE-HNWFFGADQLEQMPV 180
            DL+ +REMRLVPS+  +LETLF++FC+CAELNPEP  +EEEE  HNW F ADQ++    
Sbjct: 121 LDLSKIREMRLVPSDSTQLETLFDVFCECAELNPEPVQEEEEESGHNWVFSADQMDVRGG 180

Query: 181 AGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGK 233
             D E Q S  P S IGHSNGD + L + +L+LQIND+RFEDA+EM  E+  K
Sbjct: 181 DDDAEWQISQSPTSVIGHSNGD-EGLNQPMLELQINDQRFEDAEEMVHESETK 227

[Close]
BLAST of Cucsa.115660.2 vs. NCBI nr
Match: gi|778700509|ref|XP_011654882.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 2.0e-134
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120
           LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPVA 180
           FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPVA
Sbjct: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPVA 180

Query: 181 GDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC 235
           GDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC
Sbjct: 181 GDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC 234

[Close]
BLAST of Cucsa.115660.2 vs. NCBI nr
Match: gi|449451805|ref|XP_004143651.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 8.5e-133
Identity = 234/237 (98.73%), Postives = 234/237 (98.73%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120
           LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMP-- 180
           FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMP  
Sbjct: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPGL 180

Query: 181 -VAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC 235
            VAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC
Sbjct: 181 SVAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKHC 237

[Close]
BLAST of Cucsa.115660.2 vs. NCBI nr
Match: gi|659073128|ref|XP_008467269.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 6.5e-125
Identity = 221/234 (94.44%), Postives = 226/234 (96.58%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MTMGLR YT+RTGNGLG PSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLY+SSRQVVW
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120
           LSD  MAKGYAVDFLSMSLHAVSTDPEAY SPCLYVQIDTGDDEELENSDSECHGEESEN
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPVA 180
           FDL AVREMRLVPSNPNELETLFEIFCQCAELNPEP GDEEEEEHNWFFGADQLEQMPVA
Sbjct: 121 FDLTAVREMRLVPSNPNELETLFEIFCQCAELNPEPNGDEEEEEHNWFFGADQLEQMPVA 180

Query: 181 GDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPE-NNGKH 234
           GDDEEQFSSIPPSSIG+SNGDHDQLARTVLQLQIND+RFEDA+EMEPE NNGKH
Sbjct: 181 GDDEEQFSSIPPSSIGNSNGDHDQLARTVLQLQINDQRFEDAEEMEPENNNGKH 234

[Close]
BLAST of Cucsa.115660.2 vs. NCBI nr
Match: gi|659073126|ref|XP_008467268.1| (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo])

HSP 1 Score: 449.9 bits (1156), Expect = 2.7e-123
Identity = 221/237 (93.25%), Postives = 226/237 (95.36%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60
           MTMGLR YT+RTGNGLG PSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLY+SSRQVVW
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120
           LSD  MAKGYAVDFLSMSLHAVSTDPEAY SPCLYVQIDTGDDEELENSDSECHGEESEN
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMP-- 180
           FDL AVREMRLVPSNPNELETLFEIFCQCAELNPEP GDEEEEEHNWFFGADQLEQMP  
Sbjct: 121 FDLTAVREMRLVPSNPNELETLFEIFCQCAELNPEPNGDEEEEEHNWFFGADQLEQMPGL 180

Query: 181 -VAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPE-NNGKH 234
            VAGDDEEQFSSIPPSSIG+SNGDHDQLARTVLQLQIND+RFEDA+EMEPE NNGKH
Sbjct: 181 SVAGDDEEQFSSIPPSSIGNSNGDHDQLARTVLQLQINDQRFEDAEEMEPENNNGKH 237

[Close]
BLAST of Cucsa.115660.2 vs. NCBI nr
Match: gi|596004628|ref|XP_007218317.1| (hypothetical protein PRUPE_ppa010981mg [Prunus persica])

HSP 1 Score: 289.3 bits (739), Expect = 6.2e-75
Identity = 152/233 (65.24%), Postives = 176/233 (75.54%), Query Frame = 1 

Query: 1   MTMGLRPYTQRTG-NGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVV 60
           M  GLR +T R   NG+  P  D + GE LMHV P V IV  NRPPE PGTLYIS+++VV
Sbjct: 1   MVAGLREFTARVERNGVDEPVLDAENGEELMHVQPCVSIVLGNRPPESPGTLYISTKKVV 60

Query: 61  WLSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDE-ELENSDSECHGEES 120
           WLSDV  AKGYAVDFLS+SLHAVS DPEAYTSPC+Y QI+T DDE E + SDSEC+G   
Sbjct: 61  WLSDVDRAKGYAVDFLSISLHAVSRDPEAYTSPCIYTQIETEDDEHESDGSDSECNGV-- 120

Query: 121 ENFDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMP 180
              DL+ + EMRLVPS+PN+L++LFE+FC+CAELNPEP  +EEEEEHNW F ADQLE   
Sbjct: 121 --LDLSKITEMRLVPSDPNQLDSLFEVFCECAELNPEPI-EEEEEEHNWIFSADQLEDDA 180

Query: 181 VAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNG 232
              D E   S  P  SIG SNGDHD LARTVL+LQIND+RFEDA+EME EN+G
Sbjct: 181 TGEDSEWHVSENP--SIGQSNGDHD-LARTVLELQINDQRFEDAEEMEHENDG 225

The following BLAST results are available for this feature:
BLAST of Cucsa.115660.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ICLN_ARATH2.5e-6857.51Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana GN=At5g6229... [more]
ICLN_MOUSE9.4e-1535.59Methylosome subunit pICln OS=Mus musculus GN=Clns1a PE=1 SV=1[more]
ICLN_RAT1.6e-1435.59Methylosome subunit pICln OS=Rattus norvegicus GN=Clns1a PE=1 SV=1[more]
ICLN_RABIT3.0e-1333.90Methylosome subunit pICln OS=Oryctolagus cuniculus GN=CLNS1A PE=2 SV=2[more]
BLAST of Cucsa.115660.2 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPP2_CUCSA5.9e-13398.73Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171150 PE=4 SV=1[more]
M5X213_PRUPE4.3e-7565.24Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010981mg PE=4 SV=1[more]
A0A061G066_THECC4.4e-7260.85Nucleotide-sensitive chloride conductance regulator (ICln) family protein OS=The... [more]
A0A0D2PW21_GOSRA5.8e-7259.49Uncharacterized protein OS=Gossypium raimondii GN=B456_001G237900 PE=4 SV=1[more]
A0A0D2NDI1_GOSRA5.8e-7259.49Uncharacterized protein OS=Gossypium raimondii GN=B456_001G237900 PE=4 SV=1[more]
BLAST of Cucsa.115660.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G62290.11.4e-6957.51 nucleotide-sensitive chloride conductance regulator (ICln) family pr... [more]
BLAST of Cucsa.115660.2 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778700509|ref|XP_011654882.1|2.0e-134100.00PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis sati... [more]
gi|449451805|ref|XP_004143651.1|8.5e-13398.73PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis sati... [more]
gi|659073128|ref|XP_008467269.1|6.5e-12594.44PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo... [more]
gi|659073126|ref|XP_008467268.1|2.7e-12393.25PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo... [more]
gi|596004628|ref|XP_007218317.1|6.2e-7565.24hypothetical protein PRUPE_ppa010981mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003521ICln
Vocabulary: Biological Process
TermDefinition
GO:0000387spliceosomal snRNP assembly
GO:0006821chloride transport
GO:0006884cell volume homeostasis
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0005886plasma membrane
GO:0034709methylosome
GO:0034715pICln-Sm protein complex
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006884 cell volume homeostasis
biological_process GO:0006821 chloride transport
biological_process GO:0000387 spliceosomal snRNP assembly
cellular_component GO:0005829 cytosol
cellular_component GO:0034709 methylosome
cellular_component GO:0034715 pICln-Sm protein complex
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.115660Cucsa.115660gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.115660.2Cucsa.115660.2-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.115660.2.five_prime_UTR.1Cucsa.115660.2.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.115660.2.CDS.1Cucsa.115660.2.CDS.1CDS
Cucsa.115660.2.CDS.2Cucsa.115660.2.CDS.2CDS
Cucsa.115660.2.CDS.3Cucsa.115660.2.CDS.3CDS
Cucsa.115660.2.CDS.4Cucsa.115660.2.CDS.4CDS
Cucsa.115660.2.CDS.5Cucsa.115660.2.CDS.5CDS
Cucsa.115660.2.CDS.6Cucsa.115660.2.CDS.6CDS
Cucsa.115660.2.CDS.7Cucsa.115660.2.CDS.7CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.115660.2.three_prime_UTR.1Cucsa.115660.2.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003521IClnPRINTSPR01348ICLNCHANNELcoord: 46..61
score: 7.3E-6coord: 69..83
score: 7.3E-6coord: 124..136
score: 7.
NoneNo IPR availablePANTHERPTHR21399CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLNcoord: 1..231
score: 5.5
NoneNo IPR availablePFAMPF03517Voldacscoord: 49..169
score: 1.5