Cucsa.078610.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGCAGTGTGTGGTGTTGTTGTTTGTGTTGTGTTTGGCAATACTTGAGGAAACAAAGGCTGTAGAGCTTGAAAAATGGCATATCCACGTTGTGAATGGGCTAAGCAATGGTCAAATCTTGTTGGCTCATTGCAAATCCAAAGACAATGATTTAGGAGAACGTAGGCTTATTGCTGGAACTGAATTCAATTGGAGATTTAGAGTAAATTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAAAAGCCAAATGGACAACATTCATCATTTGAATCGTTTTGGATTGAGAGCAGATCAGTTTGGCTATATACAATGTGCTTTGAGAAAAATTGTATTTGGACTGCTAAAGATGATGGAATTTATTTGAAGGACAATTTCGATACTCACAAAGATATTTTGATTCATAA ATGAAGAAGCAGTGTGTGGTGTTGTTGTTTGTGTTGTGTTTGGCAATACTTGAGGAAACAAAGGCTGTAGAGCTTGAAAAATGGCATATCCACGTTGTGAATGGGCTAAGCAATGGTCAAATCTTGTTGGCTCATTGCAAATCCAAAGACAATGATTTAGGAGAACGTAGGCTTATTGCTGGAACTGAATTCAATTGGAGATTTAGAGTAAATTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAAAAGCCAAATGGACAACATTCATCATTTGAATCGTTTTGGATTGAGAGCAGATCAGTTTGGCTATATACAATGTGCTTTGAGAAAAATTGTATTTGGACTGCTAAAGATGATGGAATTTATTTGAAGGACAATTTCGATACTCACAAAGATATTTTGATTCATAA ATGAAGAAGCAGTGTGTGGTGTTGTTGTTTGTGTTGTGTTTGGCAATACTTGAGGAAACAAAGGCTGTAGAGCTTGAAAAATGGCATATCCACGTTGTGAATGGGCTAAGCAATGGTCAAATCTTGTTGGCTCATTGCAAATCCAAAGACAATGATTTAGGAGAACGTAGGCTTATTGCTGGAACTGAATTCAATTGGAGATTTAGAGTAAATTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAAAAGCCAAATGGACAACATTCATCATTTGAATCGTTTTGGATTGAGAGCAGATCAGTTTGGCTATATACAATGTGCTTTGAGAAAAATTGTATTTGGACTGCTAAAGATGATGGAATTTATTTGAAGGACAATTTCGATACTCACAAAGATATTTTGATTCATAA MKKQCVVLLFVLCLAILEETKAVELEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQKPNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHX
BLAST of Cucsa.078610.1 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 6.3e-34 Identity = 72/136 (52.94%), Postives = 89/136 (65.44%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.5e-30 Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.1e-29 Identity = 66/129 (51.16%), Postives = 83/129 (64.34%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.6e-29 Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. TrEMBL
Match: A0A061DNM1_THECC (S-protein, putative OS=Theobroma cacao GN=TCM_003116 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.3e-28 Identity = 64/129 (49.61%), Postives = 79/129 (61.24%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1) HSP 1 Score: 104.0 bits (258), Expect = 7.6e-23 Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 102.4 bits (254), Expect = 2.2e-22 Identity = 46/101 (45.54%), Postives = 66/101 (65.35%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. TAIR10
Match: AT3G26880.1 (AT3G26880.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11 Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 65.9 bits (159), Expect = 2.3e-11 Identity = 35/109 (32.11%), Postives = 57/109 (52.29%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. TAIR10
Match: AT3G55677.1 (AT3G55677.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 64.7 bits (156), Expect = 5.1e-11 Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. NCBI nr
Match: gi|659124369|ref|XP_008462123.1| (PREDICTED: uncharacterized protein LOC103500552 [Cucumis melo]) HSP 1 Score: 168.3 bits (425), Expect = 9.3e-39 Identity = 75/137 (54.74%), Postives = 98/137 (71.53%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. NCBI nr
Match: gi|778730341|ref|XP_011659760.1| (PREDICTED: uncharacterized protein LOC105436265 [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 1.6e-35 Identity = 71/136 (52.21%), Postives = 92/136 (67.65%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. NCBI nr
Match: gi|659116359|ref|XP_008458036.1| (PREDICTED: uncharacterized protein LOC103497573 [Cucumis melo]) HSP 1 Score: 152.9 bits (385), Expect = 4.1e-34 Identity = 70/136 (51.47%), Postives = 88/136 (64.71%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. NCBI nr
Match: gi|778726822|ref|XP_004139670.2| (PREDICTED: uncharacterized protein LOC101212063 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 9.0e-34 Identity = 72/136 (52.94%), Postives = 89/136 (65.44%), Query Frame = 1
BLAST of Cucsa.078610.1 vs. NCBI nr
Match: gi|659123189|ref|XP_008461539.1| (PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]) HSP 1 Score: 149.8 bits (377), Expect = 3.4e-33 Identity = 74/134 (55.22%), Postives = 95/134 (70.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
|