Cucsa.012500.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAGCAGATTTGAAGCTACACATTAGAATCTTCAAAATGGCTCAGATATGTGAGATCTCAGAGCAAGTGAATATCAAGTCTTCTGCTCACAAGTTCTATCAGTTTTTCAAGAACAAAATGGATTATGTTTTTGTTCAAATGTTCCCTGAAATTTATAAGAGTTGTAAGGTGGTGGAAGGGAATGGTTTTTCTGATGGCAGCATCATCCACCTAAAATTTAACGCAGGTGAGGATCTGTATCAAAACCATCATTTCAATTTTTTTCGATTTTGGTTCAGTTATACTTTTAAATATTCTATATTTTAACATTTCGACTTTTTtCTTCTGACCAAAATTACCTTTGAGAAATCAATATTATTTATTTATTATTTCAAAAAGCTATTTAAGAAACACTACTCTTACCTTCTAAATCTTTTTCTTTtATTATCTACTTCTCTACCcATGTTTTAAAAATCAAGGGAgCTAGTTTCTAGAAACAAAAATAAAATGAATTTTAAAAGTTTGCTTTTGTTTCACGAATTTGGTTAATAATTCAAACTTTTTtAATAAAAAGATTATCAAGCCTAAAATCCAAACGCAAGAACAAAAGGCCAAATAAGTCTTATCAAATCGAGCCTAAAAGGTTCTGGGTTTGTTACGCAACCTCCTTAACATCATATTCTTCCTCACTTTATATCAATACAATTGATGCGTCAGGTTTTATATGTCAGTTGTACATATACACCTTTATtGtATTTtGCGAGcTCCTGGgATTTACTTAGCAaCAATTCTTACtCtCTTTttGTTTTTTtttttCcTtGTTTtGGATGAAATTACTTAGGAAAACCAGAAGAGGTGAAAGAGAGGCTAGCTATTGATGATGCCAACAAaTCAATAACTTTtGAGTGCCTTGAAGGAGATCCATTAAGAAATTTTGAAGTGCTTAAATTAAAATTtCAAGTTCTTGAGAATGGTAACAATGGAGGAACAGTTAATTGGTCTATAGAGTTTGTGAAGGCAAATGAAGATGTGGCTTCACCACATCACTATCTCCTATGTGTAACTAAAGTTGCCAAAGGCCTTGATGACTACCTTTGCAACAACTGAACTTAAAAGCCATCCCAACTTGGTTTGGCTATTAAAATTATATGAATTAAATATCTCCTTATCTCGAGCTGTATTGTTATCATATGTGTGTACTCTGAAGCTTAATTGGAATAAATAACGTAACAATGGTAATGGTTACTTATTCTACTA TGAGCAGATTTGAAGCTACACATTAGAATCTTCAAAATGGCTCAGATATGTGAGATCTCAGAGCAAGTGAATATCAAGTCTTCTGCTCACAAGTTCTATCAGTTTTTCAAGAACAAAATGGATTATGTTTTTGTTCAAATGTTCCCTGAAATTTATAAGAGTTGTAAGGTGGTGGAAGGGAATGGTTTTTCTGATGGCAGCATCATCCACCTAAAATTTAACGCAGGAAAACCAGAAGAGGTGAAAGAGAGGCTAGCTATTGATGATGCCAACAAATCAATAACTTTTGAGTGCCTTGAAGGAGATCCATTAAGAAATTTTGAAGTGCTTAAATTAAAATTTCAAGTTCTTGAGAATGGTAACAATGGAGGAACAGTTAATTGGTCTATAGAGTTTGTGAAGGCAAATGAAGATGTGGCTTCACCACATCACTATCTCCTATGTGTAACTAAAGTTGCCAAAGGCCTTGATGACTACCTTTGCAACAACTGAACTTAAAAGCCATCCCAACTTGGTTTGGCTATTAAAATTATATGAATTAAATATCTCCTTATCTCGAGCTGTATTGTTATCATATGTGTGTACTCTGAAGCTTAATTGGAATAAATAACGTAACAATGGTAATGGTTACTTATTCTACTA ATGGCTCAGATATGTGAGATCTCAGAGCAAGTGAATATCAAGTCTTCTGCTCACAAGTTCTATCAGTTTTTCAAGAACAAAATGGATTATGTTTTTGTTCAAATGTTCCCTGAAATTTATAAGAGTTGTAAGGTGGTGGAAGGGAATGGTTTTTCTGATGGCAGCATCATCCACCTAAAATTTAACGCAGGAAAACCAGAAGAGGTGAAAGAGAGGCTAGCTATTGATGATGCCAACAAaTCAATAACTTTtGAGTGCCTTGAAGGAGATCCATTAAGAAATTTTGAAGTGCTTAAATTAAAATTtCAAGTTCTTGAGAATGGTAACAATGGAGGAACAGTTAATTGGTCTATAGAGTTTGTGAAGGCAAATGAAGATGTGGCTTCACCACATCACTATCTCCTATGTGTAACTAAAGTTGCCAAAGGCCTTGATGACTACCTTTGCAACAACTGA MAQICEISEQVNIKSSAHKFYQFFKNKMDYVFVQMFPEIYKSCKVVEGNGFSDGSIIHLKFNAGKPEEVKERLAIDDANKSITFECLEGDPLRNFEVLKLKFQVLENGNNGGTVNWSIEFVKANEDVASPHHYLLCVTKVAKGLDDYLCNN*
BLAST of Cucsa.012500.1 vs. Swiss-Prot
Match: ML146_PAPSO (Major latex protein 146 OS=Papaver somniferum GN=MLP146 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 8.2e-12 Identity = 42/139 (30.22%), Postives = 68/139 (48.92%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11 Identity = 44/146 (30.14%), Postives = 79/146 (54.11%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. Swiss-Prot
Match: KIRO_ACTDE (Kirola OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.0e-11 Identity = 42/141 (29.79%), Postives = 76/141 (53.90%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. Swiss-Prot
Match: ML149_PAPSO (Major latex protein 149 OS=Papaver somniferum GN=MLP149 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.4e-10 Identity = 40/142 (28.17%), Postives = 67/142 (47.18%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. Swiss-Prot
Match: ML423_ARATH (MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.0e-09 Identity = 43/142 (30.28%), Postives = 75/142 (52.82%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TrEMBL
Match: A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 1.4e-82 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TrEMBL
Match: A0A0A0LA22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.4e-50 Identity = 101/152 (66.45%), Postives = 118/152 (77.63%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TrEMBL
Match: A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.5e-49 Identity = 100/152 (65.79%), Postives = 119/152 (78.29%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TrEMBL
Match: A0A0A0L771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.4e-34 Identity = 83/154 (53.90%), Postives = 106/154 (68.83%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TrEMBL
Match: A0A0A0L7N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331330 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30 Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TAIR10
Match: AT1G70890.1 (AT1G70890.1 MLP-like protein 43) HSP 1 Score: 70.9 bits (172), Expect = 7.9e-13 Identity = 44/146 (30.14%), Postives = 79/146 (54.11%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TAIR10
Match: AT1G23120.1 (AT1G23120.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 66.2 bits (160), Expect = 1.9e-11 Identity = 41/149 (27.52%), Postives = 74/149 (49.66%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 65.5 bits (158), Expect = 3.3e-11 Identity = 40/146 (27.40%), Postives = 76/146 (52.05%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TAIR10
Match: AT1G14940.1 (AT1G14940.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 65.1 bits (157), Expect = 4.3e-11 Identity = 39/142 (27.46%), Postives = 72/142 (50.70%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. TAIR10
Match: AT1G24020.1 (AT1G24020.1 MLP-like protein 423) HSP 1 Score: 64.7 bits (156), Expect = 5.6e-11 Identity = 43/142 (30.28%), Postives = 75/142 (52.82%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. NCBI nr
Match: gi|449464138|ref|XP_004149786.1| (PREDICTED: kirola [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 2.0e-82 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. NCBI nr
Match: gi|659114440|ref|XP_008457055.1| (PREDICTED: MLP-like protein 34 [Cucumis melo]) HSP 1 Score: 293.1 bits (749), Expect = 2.8e-76 Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. NCBI nr
Match: gi|778680829|ref|XP_004151203.2| (PREDICTED: major latex protein 149-like [Cucumis sativus]) HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50 Identity = 101/152 (66.45%), Postives = 118/152 (77.63%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. NCBI nr
Match: gi|700202691|gb|KGN57824.1| (hypothetical protein Csa_3G331340 [Cucumis sativus]) HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50 Identity = 101/152 (66.45%), Postives = 118/152 (77.63%), Query Frame = 1
BLAST of Cucsa.012500.1 vs. NCBI nr
Match: gi|778680249|ref|XP_011651277.1| (PREDICTED: major latex protein 146-like [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 2.2e-49 Identity = 100/152 (65.79%), Postives = 119/152 (78.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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