CsaV3_4G031340.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAATGAGATTGGACATGACATCTTAAAGAACCCAAGAGCTCAAGACTTAGAGAGTGCGTTGAAGAAAGTGGTTTGGCCCGAGACAATGTTAGATATCACGCCAACAGGAAAGTATCAGCTCCTCCCACACAATTTGAACACAGAGGCTATAATCTGGCTAGTGTTTGTGAAGAAAAAGATCATGCCTACTCGCCATGACAACAACATCTCCATGGAAAGGGTAATGTTGGTATACTGCATAATGAAGGAGATCCTGGTGAACATTGGCAAATAATAAGCGAGCACATCATTGCATGGGTCAAGCATTATCGTAGAGCAAGACCTTTCTCGCACTTAATTGAATAATTGTGCTAAAGGGCATGCCGACGAGAGAAACTTCCTCAGGTGGAGGTGAAAGATGGAATTTGGTCACTATCAATCCTTCACTGCATCATAGCCATTCACACCAAGAATGTAAAGTCAAAACGCCTCAAAATCAAGGAACGTTGTAAAGAAGTTGAAGAAGTATTGGATGGCATGATGACGTTGAAGAATAAGATGAGAAAGAAATACCCCACTGAAACGCAAAATCAAGACAAGGAGGAAGCTTTAATATCGAAGAAAGGACTCTAA ATGGAAAATGAGATTGGACATGACATCTTAAAGAACCCAAGAGCTCAAGACTTAGAGAGTGCGTTGAAGAAAGTGGTTTGGCCCGAGACAATGTTAGATATCACGCCAACAGGAAAGTATCAGCTCCTCCCACACAATTTGAACACAGAGGCTATAATCTGGCTAGTGTTTGTGAAGAAAAAGATCATGCCTACTCGCCATGACAACAACATCTCCATGGAAAGGGTAATGTTGGTATACTGCATAATGAAGGAGATCCTGGTGGAGGTGAAAGATGGAATTTGGTCACTATCAATCCTTCACTGCATCATAGCCATTCACACCAAGAATGTAAAGTCAAAACGCCTCAAAATCAAGGAACGTTGTAAAGAAGTTGAAGAAGTATTGGATGGCATGATGACGTTGAAGAATAAGATGAGAAAGAAATACCCCACTGAAACGCAAAATCAAGACAAGGAGGAAGCTTTAATATCGAAGAAAGGACTCTAA ATGGAAAATGAGATTGGACATGACATCTTAAAGAACCCAAGAGCTCAAGACTTAGAGAGTGCGTTGAAGAAAGTGGTTTGGCCCGAGACAATGTTAGATATCACGCCAACAGGAAAGTATCAGCTCCTCCCACACAATTTGAACACAGAGGCTATAATCTGGCTAGTGTTTGTGAAGAAAAAGATCATGCCTACTCGCCATGACAACAACATCTCCATGGAAAGGGTAATGTTGGTATACTGCATAATGAAGGAGATCCTGGTGGAGGTGAAAGATGGAATTTGGTCACTATCAATCCTTCACTGCATCATAGCCATTCACACCAAGAATGTAAAGTCAAAACGCCTCAAAATCAAGGAACGTTGTAAAGAAGTTGAAGAAGTATTGGATGGCATGATGACGTTGAAGAATAAGATGAGAAAGAAATACCCCACTGAAACGCAAAATCAAGACAAGGAGGAAGCTTTAATATCGAAGAAAGGACTCTAA MENEIGHDILKNPRAQDLESALKKVVWPETMLDITPTGKYQLLPHNLNTEAIIWLVFVKKKIMPTRHDNNISMERVMLVYCIMKEILVEVKDGIWSLSILHCIIAIHTKNVKSKRLKIKERCKEVEEVLDGMMTLKNKMRKKYPTETQNQDKEEALISKKGL
BLAST of CsaV3_4G031340.1 vs. NCBI nr
Match: KGN54872.1 (hypothetical protein Csa_4G569710 [Cucumis sativus]) HSP 1 Score: 325.9 bits (834), Expect = 8.0e-86 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CsaV3_4G031340.1 vs. NCBI nr
Match: KGN58104.1 (hypothetical protein Csa_3G511970 [Cucumis sativus]) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13 Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of CsaV3_4G031340.1 vs. NCBI nr
Match: KGN57727.1 (hypothetical protein Csa_3G263250 [Cucumis sativus]) HSP 1 Score: 85.9 bits (211), Expect = 1.4e-13 Identity = 55/120 (45.83%), Postives = 60/120 (50.00%), Query Frame = 0
BLAST of CsaV3_4G031340.1 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]) HSP 1 Score: 62.4 bits (150), Expect = 1.7e-06 Identity = 26/81 (32.10%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of CsaV3_4G031340.1 vs. NCBI nr
Match: KGN44535.1 (hypothetical protein Csa_7G327740 [Cucumis sativus]) HSP 1 Score: 60.1 bits (144), Expect = 8.2e-06 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of CsaV3_4G031340.1 vs. TrEMBL
Match: tr|A0A0A0L2P0|A0A0A0L2P0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G569710 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 5.3e-86 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CsaV3_4G031340.1 vs. TrEMBL
Match: tr|A0A0A0LAY9|A0A0A0LAY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G511970 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 7.1e-14 Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of CsaV3_4G031340.1 vs. TrEMBL
Match: tr|A0A0A0LAN0|A0A0A0LAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.2e-14 Identity = 55/120 (45.83%), Postives = 60/120 (50.00%), Query Frame = 0
BLAST of CsaV3_4G031340.1 vs. TrEMBL
Match: tr|A0A0A0K4F2|A0A0A0K4F2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G327740 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.4e-06 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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