Csa4G268060.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTTGACCTCTTACTTTCTCTACGCCGAAAATCCCGAACGTGGAGTCCGTCGCCACAACAACAGATTTGGGCACCAAATTAGGAAAGGAAAATGGAGCGAAGGGATGAAAAAGGGGAAGAGCGAAGTCAAATGGAAGCCGAAAAGCAGAAACTCCTTCCAGAACGGAGAGCCTAATCAGTAAATCAGGAATATTAATCTGACTAAGCTATGGTATTTTGCAGCTTTATAGTCTTATCGGTCGCTCATTTATCAGCGGATGCTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTATTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCTGATCTCTCTTCCTACGACTATGCTTCCGATTGA ATGTTTTTGACCTCTTACTTTCTCTACGCCGAAAATCCCGAACGTGGAGTCCGTCGCCACAACAACAGATTTGGGCACCAAATTAGGAAAGGAAAATGGAGCGAAGGGATGAAAAAGGGGAAGAGCGAAGTCAAATGGAAGCCGAAAAGCAGAAACTCCTTCCAGAACGGAGAGCCTAATCACTTTATAGTCTTATCGGTCGCTCATTTATCAGCGGATGCTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTATTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCTGATCTCTCTTCCTACGACTATGCTTCCGATTGA ATGTTTTTGACCTCTTACTTTCTCTACGCCGAAAATCCCGAACGTGGAGTCCGTCGCCACAACAACAGATTTGGGCACCAAATTAGGAAAGGAAAATGGAGCGAAGGGATGAAAAAGGGGAAGAGCGAAGTCAAATGGAAGCCGAAAAGCAGAAACTCCTTCCAGAACGGAGAGCCTAATCACTTTATAGTCTTATCGGTCGCTCATTTATCAGCGGATGCTTCGCAATCCATTGCTCGCTTTCCAGATCCCCTCACCAGCCACCAACTTCTTTACCTTCTCTTCGCTTTCCCTCTTCAACAGCTCTCTCGCCTTGCCCTCTCTCTTTGGACCTTATTCTGTGTTCCTCCACCTGGTTCTTTCTACTATTACTACTATTCCTCTGACTCTGATCTCTCTTCCTACGACTATGCTTCCGATTGA MFLTSYFLYAENPERGVRRHNNRFGHQIRKGKWSEGMKKGKSEVKWKPKSRNSFQNGEPNHFIVLSVAHLSADASQSIARFPDPLTSHQLLYLLFAFPLQQLSRLALSLWTLFCVPPPGSFYYYYYSSDSDLSSYDYASD*
BLAST of Csa4G268060.1 vs. TrEMBL
Match: A0A0A0L0B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268060 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 6.1e-77 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of Csa4G268060.1 vs. TrEMBL
Match: M5W0H4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012539mg PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.3e-15 Identity = 46/75 (61.33%), Postives = 54/75 (72.00%), Query Frame = 1
BLAST of Csa4G268060.1 vs. TrEMBL
Match: B9SBP8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0343440 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.5e-14 Identity = 48/84 (57.14%), Postives = 54/84 (64.29%), Query Frame = 1
BLAST of Csa4G268060.1 vs. TrEMBL
Match: W9SZJ5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019129 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.9e-14 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 1
BLAST of Csa4G268060.1 vs. TrEMBL
Match: B9GLC9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s04070g PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.5e-14 Identity = 47/76 (61.84%), Postives = 54/76 (71.05%), Query Frame = 1
BLAST of Csa4G268060.1 vs. TAIR10
Match: AT1G55365.1 (AT1G55365.1 unknown protein) HSP 1 Score: 58.5 bits (140), Expect = 3.7e-09 Identity = 33/83 (39.76%), Postives = 42/83 (50.60%), Query Frame = 1
BLAST of Csa4G268060.1 vs. TAIR10
Match: AT5G56520.1 (AT5G56520.1 unknown protein) HSP 1 Score: 58.2 bits (139), Expect = 4.9e-09 Identity = 30/70 (42.86%), Postives = 38/70 (54.29%), Query Frame = 1
BLAST of Csa4G268060.1 vs. NCBI nr
Match: gi|700198864|gb|KGN54022.1| (hypothetical protein Csa_4G268060 [Cucumis sativus]) HSP 1 Score: 294.7 bits (753), Expect = 8.8e-77 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of Csa4G268060.1 vs. NCBI nr
Match: gi|659097940|ref|XP_008449890.1| (PREDICTED: uncharacterized protein LOC103491633 [Cucumis melo]) HSP 1 Score: 154.8 bits (390), Expect = 1.1e-34 Identity = 75/78 (96.15%), Postives = 75/78 (96.15%), Query Frame = 1
BLAST of Csa4G268060.1 vs. NCBI nr
Match: gi|1009124014|ref|XP_015878844.1| (PREDICTED: uncharacterized protein LOC107415082 [Ziziphus jujuba]) HSP 1 Score: 93.6 bits (231), Expect = 3.0e-16 Identity = 47/79 (59.49%), Postives = 56/79 (70.89%), Query Frame = 1
BLAST of Csa4G268060.1 vs. NCBI nr
Match: gi|694315516|ref|XP_009375970.1| (PREDICTED: uncharacterized protein LOC103964725 [Pyrus x bretschneideri]) HSP 1 Score: 93.2 bits (230), Expect = 3.9e-16 Identity = 48/75 (64.00%), Postives = 55/75 (73.33%), Query Frame = 1
BLAST of Csa4G268060.1 vs. NCBI nr
Match: gi|657951143|ref|XP_008351351.1| (PREDICTED: uncharacterized protein LOC103414759 [Malus domestica]) HSP 1 Score: 92.4 bits (228), Expect = 6.6e-16 Identity = 48/75 (64.00%), Postives = 55/75 (73.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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