Csa4G131140.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACCACACAATTAGGAGAAAAAATTAGTGATCTATCTTTCTTGTTCTTTTGCAATTCCTCTACCTTCCAAAAGTAAACAAATAGATCCACACCCAACTCTTCCCTCTTTCTAAATTATTGTTCACACACGGGACTCTCCTCAAACACCATGGCTACAACATTTTCAATACCAACCATGGCAATCCTCATTCTGACTCTACTGTTCAACCCAACCCGTTGCAACACAACCGTCAATGAGACAACATCGGAGTGGTGCTACGGGTCCGAGAATTGCCTCGTCGGCGATGAGAGCTTGGATTCGGAGTTTTTAATGGAGACAGAGACCAGCCGGATGCTGCTGGACTTTCAGAATTTACAAACTCCAGGCACTATAGACCCTAACAGACAATCGGTTGCAGAATGTGGGCGGCCGCCACGGTACGACAGCTGCACTGGAGAAGAAAGGCAGATCCCCAACCCTGAAAATTGTGACGTCCGAAATCGCGCGAATCCGTGTTAGTCCTCCTCATCTTTTAGCTCCGATCGGAAGAATTGAAGCCAATGTATCTGTTTGTCGTTATTTGAATAAATGAATTGCAATATCTGTTTTAATCACAATCAGCTGTATAATCTTAATTACTCTCATTAGTTCATAATCATTTCAACCACTTGTTTAGTTAAGCTTTGATTCGAATTTTGTTAACATAATTTTCAAAATCTACTTTTACATCGAGTTGTGATATTACAAAGATAAAATATGTATTGAGTAAACTAATTTTG ATGGCTACAACATTTTCAATACCAACCATGGCAATCCTCATTCTGACTCTACTGTTCAACCCAACCCGTTGCAACACAACCGTCAATGAGACAACATCGGAGTGGTGCTACGGGTCCGAGAATTGCCTCGTCGGCGATGAGAGCTTGGATTCGGAGTTTTTAATGGAGACAGAGACCAGCCGGATGCTGCTGGACTTTCAGAATTTACAAACTCCAGGCACTATAGACCCTAACAGACAATCGGTTGCAGAATGTGGGCGGCCGCCACGGTACGACAGCTGCACTGGAGAAGAAAGGCAGATCCCCAACCCTGAAAATTGTGACGTCCGAAATCGCGCGAATCCGTGTTAG ATGGCTACAACATTTTCAATACCAACCATGGCAATCCTCATTCTGACTCTACTGTTCAACCCAACCCGTTGCAACACAACCGTCAATGAGACAACATCGGAGTGGTGCTACGGGTCCGAGAATTGCCTCGTCGGCGATGAGAGCTTGGATTCGGAGTTTTTAATGGAGACAGAGACCAGCCGGATGCTGCTGGACTTTCAGAATTTACAAACTCCAGGCACTATAGACCCTAACAGACAATCGGTTGCAGAATGTGGGCGGCCGCCACGGTACGACAGCTGCACTGGAGAAGAAAGGCAGATCCCCAACCCTGAAAATTGTGACGTCCGAAATCGCGCGAATCCGTGTTAG MATTFSIPTMAILILTLLFNPTRCNTTVNETTSEWCYGSENCLVGDESLDSEFLMETETSRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC*
BLAST of Csa4G131140.1 vs. TrEMBL
Match: A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131140 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 9.3e-63 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Csa4G131140.1 vs. TrEMBL
Match: A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G130630 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-28 Identity = 67/119 (56.30%), Postives = 80/119 (67.23%), Query Frame = 1
BLAST of Csa4G131140.1 vs. TrEMBL
Match: A0A0A0LCJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298580 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.3e-16 Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 1
BLAST of Csa4G131140.1 vs. TrEMBL
Match: A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298570 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 6.1e-14 Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 1
BLAST of Csa4G131140.1 vs. TrEMBL
Match: A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298070 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 8.8e-13 Identity = 51/118 (43.22%), Postives = 66/118 (55.93%), Query Frame = 1
BLAST of Csa4G131140.1 vs. NCBI nr
Match: gi|700198642|gb|KGN53800.1| (hypothetical protein Csa_4G131140 [Cucumis sativus]) HSP 1 Score: 247.3 bits (630), Expect = 1.3e-62 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Csa4G131140.1 vs. NCBI nr
Match: gi|700198640|gb|KGN53798.1| (hypothetical protein Csa_4G130630 [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-28 Identity = 67/119 (56.30%), Postives = 80/119 (67.23%), Query Frame = 1
BLAST of Csa4G131140.1 vs. NCBI nr
Match: gi|700202648|gb|KGN57781.1| (hypothetical protein Csa_3G298580 [Cucumis sativus]) HSP 1 Score: 93.2 bits (230), Expect = 3.2e-16 Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 1
BLAST of Csa4G131140.1 vs. NCBI nr
Match: gi|778680757|ref|XP_011651393.1| (PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus]) HSP 1 Score: 85.1 bits (209), Expect = 8.8e-14 Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 1
BLAST of Csa4G131140.1 vs. NCBI nr
Match: gi|700202646|gb|KGN57779.1| (hypothetical protein Csa_3G298070 [Cucumis sativus]) HSP 1 Score: 81.3 bits (199), Expect = 1.3e-12 Identity = 51/118 (43.22%), Postives = 66/118 (55.93%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
|