CsGy5G015840.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy5G015840.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr5 : 22090866 .. 22096475 (+)
Sequence length567
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGTTCAGAAGGAGAAGAAGCTCGAAATCGAAATCCCGACGAAAATTTCCTAGTAATTAGAGACGACTATTTTGTTCATCATGAATCCCCTGTTTTCCCCCCATTCAGCACGAAGATTTTCCAGTGGTAACTGTTGAGAATCAGATAGCCTCCAGCGAATCGGAATCATCAGAATCATCCACTCCGGAGAGTTCGGATATGCGACTGAGAGCCGTTGTGGTAGAAGCTATTATGAGGGGTTGTGAGGTGGTTAAAGCGAAGGTGGTTTCTGGAATTGTTGGATTTGGATGGTATGGTGTGAGATTATGGTCTATTTTCGGGGCTACGGCAATGGCGGGTTTGTTGATTGTATTGTTGTTTTTGTTAAAGATGAAGGTGTGGCTGCCATGGCGGCCACGAGGTTTGGCTGTCCGTAGGGATAGGGAGGAGCCTTTGGTTCTTCTCCTTAAACACAAGGATGAGGTTCGTTCTTTAATACCTAATCATTGCCTCATAACCTTTCTTTTAACACTTTTGAAGGATACAAAATCTCGTGAGTGTTAAGGTTTGCTATCTAATTTCTTTTTCAAATGTCGAGTTTTGAAAACTTTCATGTATGTTTGTATTTACTGTTTAGTATTTGATTAGAATTTCCAAAGGATTCAATAAGGTGAGAACTATAAACAGAAATTAAGTACAGATTTCATAATTAACATTCCTTTACTTAACACTTCACTACTTCATTTTTGTTTGTTTAATCATAGAAATTAATTTACATAATTTTATTTTTCAGAAAATCAATGAACTCTTGGTTCAAATTGCCCAAATGAATGAAACACTCTCAGCTCGTCGAAAGGTCCCTGTTGTCAGAATTAAATGACAAATACAACCTCTAAAATGGTTCAATTCCTTGGAGGAGTTGGTCAATTTTTGATGGCATTGAGTTTATAATGTGTCCTTTGCAAAAGGAAAGTATATATTGAAACTTGTAATCTCAGTTTGTACATTTACTTTTCTTTCATACATCTTATATGTGTCTATATGTAACATCCAAATACTATACATTTATAAATTAACAACATTATTATACCTTTCTTCCCTGAGAGCAGTGTTTTGAATAACTTTAGAAGTGTAAAGTACAGATTTAATATTATCAGGCCAAATGTTAGCTGATATAGCTTAAGGAGACGACACCCTCTAATATTCGTCGTGGTATGTTTAATTGGAAAACATTTTCAAGTATTTAATTTAAAAAATAAGTTATTTTGAAAAAGAATTGAAGTGTTCCGCTAGAATGTATTCATATTCAATTACCATCGAACTCAGTTGGAAAAGATCCATCAAACAACCAATCGAATAAAATTTATAAACTACTATCCAATACAACCTCTACTACTGGGTAGTTTAGCACTAAGACTAAGTCATTCACAGTTCGTGCATAAAGAGATTTCATAAATATAAAGGATTAAATGTAACCTAATTTGAACCATGAAGTTTAGGAAGTAGTGGTAATCTGATGACCCACAAGCTCACACGTCAAGTTATATAACCTAGAAAATGGTCTATGACGCCAAGTATGAGATTTTAGCTATTTAAGAGTTGTTTCGACTTTATTCAAGGAATCGACTTCAAGTTTCAATTTTCAATTTTGAAAACACTAAAGAGTACGTTTAAGAGATCAAAGAGTTTTAGCATGTTGGATTTCATTAGTTAATTATGAAATTTTGTATAAACATCATCAAACTTAATTCCAAATTATTTTCTTCCATAAACAATCCTTTCCCATGCGTCCTAATTGATAACAAATCTTTTGAAACCAATTCAAGTAACATGGCTTTAAGCAAGATTATTAGAAAGACTTTCATTATTTACCTAAATATTCCCACGAGAGATTAACTACAGTTTAATGTTATAGATTCAATCAAACATGCAATCTATCTATTGAACATTTAATCTAACATTCTTTGAAGATCAATCAACAATAGCACAGTAGCATTTAGAAACCATGAAGTTCAACGATATTCATGATGAATTCTAAACATCAATCTAAATGTATAACCAAACATCAACACCCTAAAACTAGAGATTTTAGCCACTTATGACTCAAATATATATTCTCATACAAATTTGCATGCATTAAGTTTGAGAAGGGATAAAGAAGCAAAAAAATCTACTTTCGTGTTACTTTTCTTTTGATAGAATCCACCAATCTCCTCTCAGGTGGCACATTCGGATCTCGAATGAGCTCCAAGACTAATTCTTCACACTCTCTTATTTTTCTATGACAAACTCCCACTTTTAAGACTCAAGAATGTATGGCCTACTTTTAAGATTGTAATTTTCATAATATTGAAGTTGTTGAATTAGTTAACCATAATAACTATCGTATTGTAACAACTCCTCCACATAAATAAAACCTTCTGCCTTCGATCAGAGGAGAGATAGATTCATTGAATAAAAACTACCTCGTGATTTAAACCAATTGGTATCAGAGTCCCTAGAATCCATGGGACCAATGGCCATTCATCAATCGGTTGAACAGGTGGGCGATGGCTGGAACGGTCAACAACAAGAGGGCGGAAGCAACCCTCGTCCTCTCTCCAAGGACTTCTTCAAGGTGCTTGCATGCAGTGTGTTGAAGCTTCAATGGAGAGAATGAAGAAAACACTGAATGGAGTTCTTCAAAGGTTAGAAGCTGCAATCTTGTTTCAAGAAACCATGATCATAACCCGTGTTGATTTGCTAGAAGACAAAAGTGGGCGGTGGAGTTGATGTGACTTGACGAGAATGGCGTTGGCGCAAACACGATCAGAGGATAACGACAAGTTGAGCAGTAGGGAATGGGTAGTTCCCGCCTAAAAATACCTATAAATACCCTTCCACTCCACTAGATACATACACACGAAAAGAGGCACATAGAGACATATATATACAACTAGGAAAAACAAGTGACCACACTATATATAGAAGTTTATCCTTACCTACCTTTTCTTTGACCAAATTATATGTGAGCGCTTAGAGAGAGATTAGAGAGAGAAGTCCATAAGTCATTTCCCTACCTTATAAAAAAGTTATGCATAGCAATGCATTTTTCTGGTTAACTTCATTTCTTTCTTTCCTATTTTAATACTTTTTTTTATGTATTGTTTGAATGTTATGGAGTCCATAACTAAGAGGCCTACCCAGTGCCCCTCATGCATGGTGCACGTTGGTGTTTCCCGCACATCGTGTGTCGCACTAATCTCCAAGACAGTGTCATGCGCGTAGCTTGAGCGCGCATCTTGCCACTCAGCTGTGCCATGACCTTGTCATGTGCGTTCAATCTAACCCAAAATAACCTCTATGACTAAAACACGTGTCCATCTCACCTACACATGCATGACTCATGACCACTACCCAGTTACTATTTAATTTTCAAAATCATGACCCATCTTTGAAAAATCATAACTTAAAATCCATAACTTTTTTTTATAAAACTTCCTTCTACAAAGTTGCTCTAAAAGGTCTTAACTTTCTTACCTCAAATTGTAGAAGGAAAATTCCAATTAATGAGTCCTATAGCTCTCTGGAAGTAAACCTTGCTTAGAATCTTTTGGAAAATGACCTTCTCACCTTCTCTTGATCAAAACACAAACCTTCTTGATTTAAAAATAACCAACAACCCTCTTTCATAAACTAAACTCAATTATTAAACTTTCAAGACTAATTTGAGTGATTTTGCACGAGTAAGTTGTGAGAAATTGATTGTTGAAGCTAGCCTATTTATAAATTCTCTTGCATGTGATTAAGATGACACTTAATCTTGATTAGACTCACCTCTTAATCTCTTGTTAACAGCTTAGCATCTCCTCCACGTCCTCCTTGGTTGCACAAATGCATGGTGACATGGAAATGACACCTGGACTTACTTTTAATCAAATGCCCTTAACATGCCACATACTTGTCCTACTCATATGGCTAACCTCCAAGTCATCCCTTGGCTGCCTAACTTCCTCGCGTGATACCTTCTTCACTTAGCTAACCTCCCACACTTGGCCGCAAGCCTTTCTCACATGACACTCTTCCTTCGGTTAAATAACCTCTAAACACTTGCCACCAAGCCTTCCTTGCGTGCCATCAACCTTCCTCGCCCACCAACCTTCTTCGCATGGCCATATCTCTCGCCTAAATAACCTTTCATGGTGTTCCTCACGTGGTCCTTGGCCACCCAAAGACAAGCCTCAAACGCCCAAGCATCATCTTTTGGAGGTTAGTTTCCTTACTTTGGTCGCCTACTCCATAACTCATGCCTATCCTTAGAGGTTTTCAAGCCTCTCTTTACTGCCCAACGACACCCTTTTGGAGGTTACATTGCCTTCCTTTTTCGCCCACATAACCTCCAAACATCTTATTACCTAGTTTTGACACTTAATCAAAATTTCTCAACTTCTCTCTTATTCTCAAACCTAAACTTAAATTTCAAATATTTTTACCTTCTTTTTCCATAAATTTCATTTTCTCTTGTTTTTGACCAATCTTAGCAAATCCGAAGGTTAAAGAAATTTTGACTTTCACAGTGGTTGTGGTGGCGACTGTTGTGGTGATGATGGAGGTTGTTGATGCTTCCTTGCTTGAACCGTAGGGTCAAATTGCATCAGGGGACTCACCATGCTCTGAGGAATTTGAGGTACTGGGATGGTGCTACCACTAAAAGGTGTTGATACCTTAACCAAGTTGTGAATTGTGTATCGGACCTCACGACCAGTTCCTCAATCAAACCAGTCAGCATTTTCATTTTGCTCCCTTATCACTTGATTTTGTTCTCTGATTGCAAGAAGTTGTGTTAGGAGCTCATGATTCTGTGTTTTAACTTCGTCATTTCTCCCTTAAGTTAATTCATTTGTACCTCAGTTTTGACACTTGCATTGTCTACTATAAGCTCTAAGTCGCTAAGTTGTCCATGACTCTACAAGAGCATTTCTTGTAAATTACTTTGGCACTAGATTATGTCTTCAAATTCCTTCTTCATTGGTTTACATACGTAATGATCCAGGAATTTGAAGAGATAATCATCATCAACTTCTTCTTCGTCTTCTCTTACTGCCTCTTTTAGCTTGATGTTTTGTGAGCAAGTCTTTGCAGTTTGCTTTGGTAGTGGGGAAGATGTGTCTCGACATCTACCTGGGTTTGTTTCCTCTTCCCTTTGGAGTGAGTCATTAACAACATCCACTTGATCTTTTCTTGTGGGGAATAACTCAGGGCTAAGTGTCCCATCTTCTTGCTCTTTAAACGTGTCGTCAATGAACGCGGTTGGATCAGAAAAAAAATCTTGAAAAATGTCCTGATTCGATTATTTAGGGCTGAAGGGTTTATTTTGATTGGTTGGCTCGACGACAAGGAATTGAGAATTTTCCTTCCTTTTTATAGTTTTTGGTGGTATCCTCCTTCATTTTTAGACTCATTGTCCTTTTTCGTAGCCAAAATAGGAATTTTCTCCTAAATTGGTTCAAAGTTGGCTTGACTTGGCTTGAGGTTGATTAGTCCATCTTGGCCCCCATGGGCCACATTTCTTCGTCCTTGGGTTCTATTATAGGGCATTGTGCAACACCGTGGGGTGTTTTCAGCAGGCTTGGACTTGGATGGTTGA

mRNA sequence

ATGGACGGTTCAGAAGGAGAAGAAGCTCGAAATCGAAATCCCGACGAAAATTTCCTAGTAATTAGAGACGACTATTTTGTTCATCATGAATCCCCTCACGAAGATTTTCCAGTGGTAACTGTTGAGAATCAGATAGCCTCCAGCGAATCGGAATCATCAGAATCATCCACTCCGGAGAGTTCGGATATGCGACTGAGAGCCGTTGTGGTAGAAGCTATTATGAGGGGTTGTGAGGTGGTTAAAGCGAAGGTGGTTTCTGGAATTGTTGGATTTGGATGGTATGGTGTGAGATTATGGTCTATTTTCGGGGCTACGGCAATGGCGGGTTTGTTGATTGTATTGTTGTTTTTGTTAAAGATGAAGGTGTGGCTGCCATGGCGGCCACGAGGTTTGGCTGTCCGTAGGGATAGGGAGGAGCCTTTGGTTCTTCTCCTTAAACACAAGGATGAGAAAATCAATGAACTCTTGGTTCAAATTGCCCAAATGAATGAAACACTCTCAGCTCGTCGAAAGGGCATTGTGCAACACCGTGGGGTGTTTTCAGCAGGCTTGGACTTGGATGGTTGA

Coding sequence (CDS)

ATGGACGGTTCAGAAGGAGAAGAAGCTCGAAATCGAAATCCCGACGAAAATTTCCTAGTAATTAGAGACGACTATTTTGTTCATCATGAATCCCCTCACGAAGATTTTCCAGTGGTAACTGTTGAGAATCAGATAGCCTCCAGCGAATCGGAATCATCAGAATCATCCACTCCGGAGAGTTCGGATATGCGACTGAGAGCCGTTGTGGTAGAAGCTATTATGAGGGGTTGTGAGGTGGTTAAAGCGAAGGTGGTTTCTGGAATTGTTGGATTTGGATGGTATGGTGTGAGATTATGGTCTATTTTCGGGGCTACGGCAATGGCGGGTTTGTTGATTGTATTGTTGTTTTTGTTAAAGATGAAGGTGTGGCTGCCATGGCGGCCACGAGGTTTGGCTGTCCGTAGGGATAGGGAGGAGCCTTTGGTTCTTCTCCTTAAACACAAGGATGAGAAAATCAATGAACTCTTGGTTCAAATTGCCCAAATGAATGAAACACTCTCAGCTCGTCGAAAGGGCATTGTGCAACACCGTGGGGTGTTTTCAGCAGGCTTGGACTTGGATGGTTGA

Protein sequence

MDGSEGEEARNRNPDENFLVIRDDYFVHHESPHEDFPVVTVENQIASSESESSESSTPESSDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMAGLLIVLLFLLKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSARRKGIVQHRGVFSAGLDLDG
Homology
[Close]
BLAST of CsGy5G015840.1 vs. NCBI nr
Match: KGN51157.1 (hypothetical protein Csa_5G468990 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 7.9e-69
Identity = 157/171 (91.81%), Postives = 157/171 (91.81%), Query Frame = 0 

Query: 1   MDGSEGEEARNRNPDENFLVIRDDYFVHHESPHEDFPVVTVENQIASSEXXXXXXXXXXX 60
           MDGSEGEEARNRNPDENFL             HEDFPVVTVENQIASSE XXXXXXXXXX
Sbjct: 1   MDGSEGEEARNRNPDENFL-------------HEDFPVVTVENQIASSESXXXXXXXXXX 60

Query: 61  XDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMAGLLIVLLFLLKM 120
           XDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMAGLLIVLLFLLKM
Sbjct: 61  XDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMAGLLIVLLFLLKM 120

Query: 121 KVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSARRK 172
           KVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSARRK
Sbjct: 121 KVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSARRK 158

[Close]
BLAST of CsGy5G015840.1 vs. NCBI nr
Match: XP_008465748.1 (PREDICTED: uncharacterized protein LOC103503357 [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 3.7e-66
Identity = 158/186 (84.95%), Postives = 163/186 (87.63%), Query Frame = 0 

Query: 1   MDGSEGEEARNRNPDENFLVIRDDYFVHHESP------HEDFPVVTVENQIASSE----- 60
           MDGSEGEEA N NPDENFLVIRDDYFVHHESP      HED PV+TVEN I SS+     
Sbjct: 1   MDGSEGEEAPNPNPDENFLVIRDDYFVHHESPVFPPILHEDLPVLTVENHIPSSDXXXXX 60

Query: 61  --XXXXXXXXXXXXDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAM 120
             XXXXXXXXXXX DMRLRAVVVEAIMRGCEVVKAKVVSGIVGFG YGVRL SIFGATAM
Sbjct: 61  XXXXXXXXXXXXXSDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGCYGVRLRSIFGATAM 120

Query: 121 AGLLIVLLFLL--KMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNET 172
           AGLLIVLLFLL  KMKVWLPWRPRGLAVRRD+EEPLVLLLKHKDEKIN+LL+QIAQMNET
Sbjct: 121 AGLLIVLLFLLKMKMKVWLPWRPRGLAVRRDKEEPLVLLLKHKDEKINQLLLQIAQMNET 180

[Close]
BLAST of CsGy5G015840.1 vs. NCBI nr
Match: XP_022946585.1 (uncharacterized protein LOC111450604 isoform X2 [Cucurbita moschata])

HSP 1 Score: 102.8 bits (255), Expect = 1.3e-18
Identity = 90/180 (50.00%), Postives = 104/180 (57.78%), Query Frame = 0 

Query: 1   MDGSEGEEARNRNPDENFLVIRDDYFVHHESP-----HEDFPVVTVENQIASSEXXXXXX 60
           MDGSE          +N LVIR+DYFVH++SP     H                XXXXXX
Sbjct: 1   MDGSEAP-----TQAQNLLVIREDYFVHYKSPVFPPAHAHSDDEXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATA----MAGLL 120
           XXXXXXD++ RA V EAIMR  E+VKAKV+SGIVGFG++  RL S    TA         
Sbjct: 61  XXXXXXDLQSRA-VGEAIMRRWEIVKAKVISGIVGFGFHARRLCSALPVTAXXXXXXXXX 120

Query: 121 IVLLFLLKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSARRK 172
                        PWRP    V  D +  L+LLLKHKD+KI+ELLVQIAQMNE LSARRK
Sbjct: 121 XXXXXXXXXXXXXPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLVQIAQMNEMLSARRK 174

[Close]
BLAST of CsGy5G015840.1 vs. NCBI nr
Match: XP_023520476.1 (uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-18
Identity = 89/182 (48.90%), Postives = 104/182 (57.14%), Query Frame = 0 

Query: 1   MDGSEGEEARNRNPDENFLVIRDDYFVHHESP-----HEDFPVVTVENQIASSEXXXXXX 60
           MDGS+          +N LVIR+DYFVH++SP     H                XXXXXX
Sbjct: 1   MDGSQA-----LTQPQNLLVIREDYFVHYKSPVFPPAHAHSDDEXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATA------MAG 120
           XXXXXXD++ RA V EAIMRG E+VKAKV+SGIVGFG +  RL S    TA         
Sbjct: 61  XXXXXXDLQSRA-VGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTAXXXXXXXXX 120

Query: 121 LLIVLLFLLKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSAR 172
                          PWRP    V  D +  L+LLLKHKD+KI+ELL+QIAQMNE LSAR
Sbjct: 121 XXXXXXXXXXXXXXXPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSAR 176

[Close]
BLAST of CsGy5G015840.1 vs. NCBI nr
Match: XP_022999312.1 (uncharacterized protein LOC111493726 isoform X1 [Cucurbita maxima])

HSP 1 Score: 100.1 bits (248), Expect = 8.3e-18
Identity = 86/190 (45.26%), Postives = 101/190 (53.16%), Query Frame = 0 

Query: 16  ENFLVIRDDYFVHHESP------HEDFPVVTVENQIASSEXXXXXXXXXXXXDMRL---- 75
           +NFLVIR+DYFVH++SP      H+ FP++T  +  A SE   XXXXXXXXX        
Sbjct: 11  QNFLVIREDYFVHYKSPVFPPTHHQQFPLITPTH--AHSEPSHXXXXXXXXXXXXXXXXX 70

Query: 76  --------------------RAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGAT 135
                                  V EAIMR  E+VKAKV+SGIVGFG +  RL S    T
Sbjct: 71  XXXXXXXXXXXXXXXXXXXQSRAVGEAIMRRWEIVKAKVISGIVGFGSHARRLCSALPVT 130

Query: 136 A----MAGLLIVLLFLLKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQ 172
           A                      PWRP    V  D E  L+LLLKHKD+KI++LLVQIAQ
Sbjct: 131 AXXXXXXXXXXXXXXXXXXXXXXPWRPPTAGVCPDNEHRLLLLLKHKDQKISQLLVQIAQ 190

[Close]
BLAST of CsGy5G015840.1 vs. TAIR10
Match: AT2G03310.1 (unknown protein)

HSP 1 Score: 41.6 bits (96), Expect = 6.3e-04
Identity = 28/74 (37.84%), Postives = 46/74 (62.16%), Query Frame = 0 

Query: 99  WSIFGATAMAGLLIVL-LFLLKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLV 158
           WS+   T + G  +VL L  +K+  W  WR     +  ++   L+LLL+ KD++I EL+V
Sbjct: 105 WSL---TIIGGFSLVLSLVYVKLVRW--WR----RLHEEKLRFLLLLLREKDQRIKELMV 164

Query: 159 QIAQMNETLSARRK 172
           +I ++NE LS+RR+
Sbjct: 165 EIGRLNELLSSRRR 169

[Close]
BLAST of CsGy5G015840.1 vs. TrEMBL
Match: tr|A0A0A0KRW8|A0A0A0KRW8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G468990 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 5.2e-69
Identity = 157/171 (91.81%), Postives = 157/171 (91.81%), Query Frame = 0 

Query: 1   MDGSEGEEARNRNPDENFLVIRDDYFVHHESPHEDFPVVTVENQIASSEXXXXXXXXXXX 60
           MDGSEGEEARNRNPDENFL             HEDFPVVTVENQIASSE XXXXXXXXXX
Sbjct: 1   MDGSEGEEARNRNPDENFL-------------HEDFPVVTVENQIASSESXXXXXXXXXX 60

Query: 61  XDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMAGLLIVLLFLLKM 120
           XDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMAGLLIVLLFLLKM
Sbjct: 61  XDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMAGLLIVLLFLLKM 120

Query: 121 KVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSARRK 172
           KVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSARRK
Sbjct: 121 KVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSARRK 158

[Close]
BLAST of CsGy5G015840.1 vs. TrEMBL
Match: tr|A0A1S3CPJ3|A0A1S3CPJ3_CUCME (uncharacterized protein LOC103503357 OS=Cucumis melo OX=3656 GN=LOC103503357 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.4e-66
Identity = 158/186 (84.95%), Postives = 163/186 (87.63%), Query Frame = 0 

Query: 1   MDGSEGEEARNRNPDENFLVIRDDYFVHHESP------HEDFPVVTVENQIASSE----- 60
           MDGSEGEEA N NPDENFLVIRDDYFVHHESP      HED PV+TVEN I SS+     
Sbjct: 1   MDGSEGEEAPNPNPDENFLVIRDDYFVHHESPVFPPILHEDLPVLTVENHIPSSDXXXXX 60

Query: 61  --XXXXXXXXXXXXDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAM 120
             XXXXXXXXXXX DMRLRAVVVEAIMRGCEVVKAKVVSGIVGFG YGVRL SIFGATAM
Sbjct: 61  XXXXXXXXXXXXXSDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGCYGVRLRSIFGATAM 120

Query: 121 AGLLIVLLFLL--KMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNET 172
           AGLLIVLLFLL  KMKVWLPWRPRGLAVRRD+EEPLVLLLKHKDEKIN+LL+QIAQMNET
Sbjct: 121 AGLLIVLLFLLKMKMKVWLPWRPRGLAVRRDKEEPLVLLLKHKDEKINQLLLQIAQMNET 180

[Close]
BLAST of CsGy5G015840.1 vs. TrEMBL
Match: tr|W9S8E9|W9S8E9_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015703 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.5e-07
Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 0 

Query: 63  MRLRAVVVEAIMRGCEVVKAKVVSGIVGFGWYGVRLWSIFGATAMAGLLIVLLFLLKMKV 122
           +RLR  ++ A     EV++A   S +  +     R WS+     +  L  +LL LL +K+
Sbjct: 120 LRLRLGILSA-----EVLRA--ASKVCNYWMIAGRFWSVVSVVGV--LTAMLLSLLYVKL 179

Query: 123 WLPWRPRGLAVRRDREEPLVLLLKHKDEKINELLVQIAQMNETLSARRK 172
              WR R L   RD +E L+LLLK KDEKI++LLVQIA+MNE LSARR+
Sbjct: 180 KPRWRTRRLL--RDDKERLILLLKEKDEKISQLLVQIAEMNEALSARRR 217

[Close]
BLAST of CsGy5G015840.1 vs. TrEMBL
Match: tr|A0A067L9U4|A0A067L9U4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15652 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.3e-05
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0 

Query: 95  GVRLWSIFGATAMAGLLIVLLFLLKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINE 154
           G   WS+  A+  A     +L  LK++ W  W      VR + E  L+ L+K KD+KI++
Sbjct: 113 GSGFWSL--ASVSAVFATAVLLYLKLQKWRQW------VREESENRLIHLIKEKDQKISQ 172

Query: 155 LLVQIAQMNETLSARRK 172
           LL+QIAQMNE LSARRK
Sbjct: 173 LLLQIAQMNEMLSARRK 181

[Close]
BLAST of CsGy5G015840.1 vs. TrEMBL
Match: tr|A0A1U8A977|A0A1U8A977_NELNU (uncharacterized protein LOC104598279 isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104598279 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.0e-05
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 97  RLWSIFGATAMAGLLIVLLFLLKMKVWLPWRPRGLAVRRDREEPLVLLLKHKDEKINELL 156
           R W    + A+A      LFL  +  W+P R R L  RRD+ + L+LL+K++DEKI++LL
Sbjct: 157 RAWPFASSIAVA----ATLFLSLLYWWVPHRNRRL--RRDKLDHLILLIKNQDEKISQLL 216

Query: 157 VQIAQMNETLSARRK 172
            QIAQ+NE LSA  K
Sbjct: 217 YQIAQINEALSAHHK 225

The following BLAST results are available for this feature:
BLAST of CsGy5G015840.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51157.17.9e-6991.81hypothetical protein Csa_5G468990 [Cucumis sativus][more]
XP_008465748.13.7e-6684.95PREDICTED: uncharacterized protein LOC103503357 [Cucumis melo][more]
XP_022946585.11.3e-1850.00uncharacterized protein LOC111450604 isoform X2 [Cucurbita moschata][more]
XP_023520476.12.8e-1848.90uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo][more]
XP_022999312.18.3e-1845.26uncharacterized protein LOC111493726 isoform X1 [Cucurbita maxima][more]
BLAST of CsGy5G015840.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G03310.16.3e-0437.84unknown protein[more]
BLAST of CsGy5G015840.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy5G015840.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KRW8|A0A0A0KRW8_CUCSA5.2e-6991.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G468990 PE=4 SV=1[more]
tr|A0A1S3CPJ3|A0A1S3CPJ3_CUCME2.4e-6684.95uncharacterized protein LOC103503357 OS=Cucumis melo OX=3656 GN=LOC103503357 PE=... [more]
tr|W9S8E9|W9S8E9_9ROSA2.5e-0744.04Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015703 PE=4 SV=1[more]
tr|A0A067L9U4|A0A067L9U4_JATCU5.3e-0545.45Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15652 PE=4 SV=1[more]
tr|A0A1U8A977|A0A1U8A977_NELNU9.0e-0546.67uncharacterized protein LOC104598279 isoform X1 OS=Nelumbo nucifera OX=4432 GN=L... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy5G015840CsGy5G015840gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy5G015840.1CsGy5G015840.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy5G015840.1.exon.1CsGy5G015840.1.exon.1exon
CsGy5G015840.1.exon.2CsGy5G015840.1.exon.2exon
CsGy5G015840.1.exon.3CsGy5G015840.1.exon.3exon
CsGy5G015840.1.exon.4CsGy5G015840.1.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy5G015840.1.CDS.1CsGy5G015840.1.CDS.1CDS
CsGy5G015840.1.CDS.2CsGy5G015840.1.CDS.2CDS
CsGy5G015840.1.CDS.3CsGy5G015840.1.CDS.3CDS
CsGy5G015840.1.CDS.4CsGy5G015840.1.CDS.4CDS


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..165
NoneNo IPR availablePANTHERPTHR37206FAMILY NOT NAMEDcoord: 17..177