CsGy3G022080.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy3G022080.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionTOPLESS-related 1
LocationChr3 : 20457591 .. 20460392 (+)
Sequence length396
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTCACCTTTCGAAATCTTCTCCCTCTCCATCAACCTCAAAATCGCCTTGGTCATGTCTCCTTTTTCTTCATATCCCATGAAGACATATCTAAAGACAAGCCTCTAAAACTCCTCAATTTAACCAATCCAACGCCTGAGAAGATGAACTTCATGTCCAACATCGGTCTGCTTGTGGCCTTCATCTTCGAAATTGTCTACTTCTTCGAGGATGGTACAACGACAATGATCTCAAGGATTGTGAAGATAAAACATTCATGATTCTCTTATTTTTGTATTATTTCTTAGTTAGTCGACTTTAGACGAACTTGAAGAACAATCAGATGGAGCTGACTTGAAATAATGTCGACGTTTTGTTTGTGAATGTGAAATTCGAAGGTGATGATGAATGAACTCCTTAATGGATTTGTTTGAATAAATTGTTATTTGTTGAATTTAATTTGAAGAATTTTGAATTTTCAAATGCAATTGGATTTTTTTTTAAAAAAAATAGGGTAATTAGATTTTTGCATCACAATTTGAGTGAGGCAAATTCTTGAGGATGAAAAGGAATAGAATCTGTGGGTTTTTTTTTTTTTTTCTTCTTAAAGCCATGTATCTTGTTTAGCTTTGAGATAGAAGGTTCATCCCTAAATTTCTCAACTGATGCATTATGGAAGGAACAACTCCTTTCCTTGTTATAGCAGGAAAGCCTGCGCTGATAGGAGAAATCATCAGATAAGTGGGTCTTTTATATTTGAATGCGATGAGGAGTATCATTTTTAGGTAACTCAATACCTCCAGATTTAACCCTTTATATCAGAGTTTTACACTCCAAATTCACCTTTGCAAGGCTTTTCAACACCTTGGATCGATTCATTGACTCATTTTTTGGGACCAAAATCTTCTCTTTTTTCTCTGTTTTCTCATATGGGGTTGGAGATTTGCATTGCATAATCATCTTCCTAGGAATTTTTGGCACATTGGATACCTTTTTCAGGAACAAAAAACCCTATGTTTTTCTTCTGTTTTCTCATTTGGGGTTGTAGTTTTACACTCAGAATTTGAAATTTCTAGCTCTTTGTCAAGTTTTTGGATTAGGATTGCAGTCGTTTGGGCGTCCTTAGAGTCAGAAAGTTGAAGGTGTGGTTGGATGAGAACCTCCATTGAAATAGGATTTGCTTGAGAAAGAGGAAGAAGAAGAGAAAGTAATGGACGAATTTCAACCACTTTTAGGGTATTTGTTCCTTTTCCTTCAAATTACATAAAATTGATATAATATTTGATTTTTTATCACTGTTTTCCAGAAGCATCTTGCTAATTATTTTTCTCTTTTCTCTTTCCTTATATTATTTTTGGTCAACCTTAGTGTCAAGAGGATGAATTTTCATAAACAATAACAAATTATACTACTCGGTATGTCCTAATTTGCTTTAAAAGCAATATCAACACCCTTTTGTTTTTATGTTGACTGTACTAGACTTGTAGATTCTGGATAAGAGTGCATATCTCACATTCCTTTCACCGTATTTTTTAATTCAGTTGGAACAAATGTGGGCGATGTCATGATCTGGGAGGTTGGTGGTCATGAAAGGATTTTTTCTATTAGAAAATTTAAAGTCTGGGATCTTTCAGCATGTTCAGTGCCTTTACATATTTGGCTTCTGTTGCGTTGCATTGGACTCCCATTAAACATTTCTTGTTAGATTTATAGCTGAAAATGCACTTTTAAAATACTAAACTCTTTGGTTTGCTTCTAGGCATCGTTGACTAGAGATTATAATGCATCAATTAATCGTGTAATGTGGAGCCCTGATGGAACTCTTTTTGGTGAGTTCAATCTTTGTGTTTTTTCTTTTGTTTTTCCCCCTTTAATTCTTTATGCTAATGATGGACTCTTGAGAAACTGTTGTTTTGTTATTGAAGTGTATTTTAAAAAAATTGGTAATTGACTAGTTTAGATTACTTTTCAACATCTAGGTATTGCATATTCAAAGCATATCATGCACATATATTCCTATCAAGTTGGTGATGAATTAAGAAATCACTTAGAGATTTGTGTTGGGGGAAAATCTTGATCATTTTTTATTTTGTACTTTCAATATCCAATTGGAACTTCTCAATCATGATCTTATTTGCATAATTTTGGTGATTGACGTTCTTTTCTTGTTTAACTTCTAAATACAGATTGAGCCTCATGTTGGCAGTGTCAATGATCTTGCCTTTTTATATGCAAACAAGCAGCTATGCTTAGTTACATGTGGGGAAGATAGGGTTATTAAGGTTTGTAACGTTTGTTTCTCAGGGACTTTCAGATGATGAGCAAAGGAAAGAATCAATCTCATTCAAATGGCGAAGATGTCTCTCCCTTATTCTTTCTTTCTTCTTTCTTCTTTTTTTACTTTAATCATCTCTTTTTTATTTTCTCATATACATTATATATGAGGACTAGATCCCAACTATTGGTTTCAAACTATATTTGCTACTTCAATTTTTCTGATTGTACTGGTTTTTTTAAATTTTATTTTTATCTTTTTTGAAGAATAAGTAGACCTTTGGCTACTATCATAGATTTGTTGCACCATATCAAATGTTTTTTTGATGGTTTTTGAGCAAAATACTTTTCCCCCACCCGATATCACAATTTTAGGAATGTGAACTTATTATGACTCCAACTTTACCTTCTTTAACAATTTAGATTGGATTTAGATTCAGCTAAAAGTTTGAAACCATGCGCTTGTTTCAGTGGTAGAGTTTTACCGGAATCTAGTTTTCGAACCCAACCCTGAAGGAATTAAAGGCATGTTCTGGTACCCTTGA

mRNA sequence

ATGGATTTCACCTTTCGAAATCTTCTCCCTCTCCATCAACCTCAAAATCGCCTTGGTCATGTCTCCTTTTTCTTCATATCCCATGAAGACATATCTAAAGACAAGCCTCTAAAACTCCTCAATTTAACCAATCCAACGCCTGAGAAGATGAACTTCATGTCCAACATCGGTCTGCTTGTGGCCTTCATCTTCGAAATTGTCTACTTCTTCGAGGATGTTGGAACAAATGTGGGCGATGTCATGATCTGGGAGGCATCGTTGACTAGAGATTATAATGCATCAATTAATCGTGTAATGTGGAGCCCTGATGGAACTCTTTTTGTGGTAGAGTTTTACCGGAATCTAGTTTTCGAACCCAACCCTGAAGGAATTAAAGGCATGTTCTGGTACCCTTGA

Coding sequence (CDS)

ATGGATTTCACCTTTCGAAATCTTCTCCCTCTCCATCAACCTCAAAATCGCCTTGGTCATGTCTCCTTTTTCTTCATATCCCATGAAGACATATCTAAAGACAAGCCTCTAAAACTCCTCAATTTAACCAATCCAACGCCTGAGAAGATGAACTTCATGTCCAACATCGGTCTGCTTGTGGCCTTCATCTTCGAAATTGTCTACTTCTTCGAGGATGTTGGAACAAATGTGGGCGATGTCATGATCTGGGAGGCATCGTTGACTAGAGATTATAATGCATCAATTAATCGTGTAATGTGGAGCCCTGATGGAACTCTTTTTGTGGTAGAGTTTTACCGGAATCTAGTTTTCGAACCCAACCCTGAAGGAATTAAAGGCATGTTCTGGTACCCTTGA

Protein sequence

MDFTFRNLLPLHQPQNRLGHVSFFFISHEDISKDKPLKLLNLTNPTPEKMNFMSNIGLLVAFIFEIVYFFEDVGTNVGDVMIWEASLTRDYNASINRVMWSPDGTLFVVEFYRNLVFEPNPEGIKGMFWYP
Homology
[Close]
BLAST of CsGy3G022080.1 vs. NCBI nr
Match: XP_022947949.1 (omega-hydroxypalmitate O-feruloyl transferase-like [Cucurbita moschata])

HSP 1 Score: 63.9 bits (154), Expect = 4.6e-07
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0 

Query: 21 VSFFFISHEDISKDKPLKLLNLTNPTPEKMNFMSNIGLLVAFIFEIVYFFED 73
          V+ F ++ ED++KD+PLKLL+  NPTPE+  F+SNI L VAF  E VYFFED
Sbjct: 3  VAPFSLTDEDLTKDEPLKLLSPANPTPEETIFLSNIDLAVAFTVETVYFFED 54

[Close]
BLAST of CsGy3G022080.1 vs. NCBI nr
Match: XP_023522514.1 (omega-hydroxypalmitate O-feruloyl transferase-like [Cucurbita pepo subsp. pepo] >XP_023539902.1 omega-hydroxypalmitate O-feruloyl transferase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 63.9 bits (154), Expect = 4.6e-07
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0 

Query: 21 VSFFFISHEDISKDKPLKLLNLTNPTPEKMNFMSNIGLLVAFIFEIVYFFED 73
          V+ F ++ ED++KD+PLKLL+  NPTPE+  F+SNI L VAF  E VYFFED
Sbjct: 3  VAPFSLTDEDLTKDEPLKLLSPANPTPEETIFLSNIDLAVAFTVETVYFFED 54

[Close]
BLAST of CsGy3G022080.1 vs. NCBI nr
Match: PNY04903.1 (topless-related protein 4-like [Trifolium pratense])

HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06
Identity = 42/123 (34.15%), Postives = 60/123 (48.78%), Query Frame = 0 

Query: 7   NLLPLHQPQNRLGHVSFFFISHEDISKDKPLKLLNLTNPTPEKMNFMSNIGLLVAFIFEI 66
           NLLP+       G  S+   S +D+ K   L L   +N      + +  I LL       
Sbjct: 324 NLLPVGYSSQSHGQSSY---SSDDLPKTAVLTLNQGSNVKSMDFHPLQQIVLL------- 383

Query: 67  VYFFEDVGTNVGDVMIWE-------------ASLTRDYNASINRVMWSPDGTLFVVEFYR 117
                 VGTN+GDVM+W+             ASL+ +Y AS+NRV+WSPDGTL  V + +
Sbjct: 384 ------VGTNMGDVMVWDIGSRERIAHRNFKASLSNEYTASVNRVVWSPDGTLCSVAYSK 430

[Close]
BLAST of CsGy3G022080.1 vs. NCBI nr
Match: XP_004139298.1 (PREDICTED: topless-related protein 4 isoform X4 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 34/69 (49.28%), Postives = 38/69 (55.07%), Query Frame = 0 

Query: 73  VGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWSPDGTLF 117
           VGTNVGDVMIWE                         ASL  DY ASINRVMWSPDGTLF
Sbjct: 373 VGTNVGDVMIWEVGGRERIAIRNFKVWDLAARSVALQASLASDYTASINRVMWSPDGTLF 432

[Close]
BLAST of CsGy3G022080.1 vs. NCBI nr
Match: XP_008456943.1 (PREDICTED: topless-related protein 4-like isoform X1 [Cucumis melo] >XP_008456951.1 PREDICTED: topless-related protein 4-like isoform X1 [Cucumis melo] >XP_008456959.1 PREDICTED: topless-related protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 34/69 (49.28%), Postives = 38/69 (55.07%), Query Frame = 0 

Query: 73  VGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWSPDGTLF 117
           VGTNVGDVMIWE                         ASL  DY ASINRVMWSPDGTLF
Sbjct: 374 VGTNVGDVMIWEVGGRERIAIRNFKVWDLSACSVPLQASLASDYTASINRVMWSPDGTLF 433

[Close]
BLAST of CsGy3G022080.1 vs. TAIR10
Match: AT1G80490.2 (TOPLESS-related 1)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06
Identity = 38/135 (28.15%), Postives = 59/135 (43.70%), Query Frame = 0 

Query: 7   NLLPLHQPQNRLGHVSFFFISHEDISKDKPLKLLNLTNPTPEKMNFMSNIGLLVAFIFEI 66
           N+LP+  P    GH +  F + +D+ K     L   ++P     + +    LL       
Sbjct: 321 NMLPMTFPGQAHGH-NQTFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLL------- 380

Query: 67  VYFFEDVGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWS 117
                 VGTNVGD+ +WE                         A+L ++   S+NRV+WS
Sbjct: 381 ------VGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWS 440

[Close]
BLAST of CsGy3G022080.1 vs. TAIR10
Match: AT3G15880.2 (WUS-interacting protein 2)

HSP 1 Score: 48.9 bits (115), Expect = 2.8e-06
Identity = 25/69 (36.23%), Postives = 35/69 (50.72%), Query Frame = 0 

Query: 73  VGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWSPDGTLF 117
           VGTN+GD+ IWE                         ASL  +Y A++NRV+WSPDG L 
Sbjct: 375 VGTNLGDIAIWEVGSREKLVSRSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLL 434

[Close]
BLAST of CsGy3G022080.1 vs. TAIR10
Match: AT1G32070.2 (nuclear shuttle interacting)

HSP 1 Score: 48.5 bits (114), Expect = 3.6e-06
Identity = 19/24 (79.17%), Postives = 22/24 (91.67%), Query Frame = 0 

Query: 108 VVEFYRNLVFEPNPEGIKGMFWYP 132
           VV+FY+NL FE +PEGIKGMFWYP
Sbjct: 234 VVDFYQNLGFEADPEGIKGMFWYP 257

[Close]
BLAST of CsGy3G022080.1 vs. TAIR10
Match: AT1G15750.1 (Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 47.8 bits (112), Expect = 6.1e-06
Identity = 25/69 (36.23%), Postives = 36/69 (52.17%), Query Frame = 0 

Query: 73  VGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWSPDGTLF 117
           VGTNVGD+ +WE                         A+L ++   S+NRV+WSPDG+LF
Sbjct: 373 VGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLF 432

[Close]
BLAST of CsGy3G022080.1 vs. Swiss-Prot
Match: sp|Q10NY2|TPR3_ORYSJ (Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.7e-06
Identity = 26/69 (37.68%), Postives = 36/69 (52.17%), Query Frame = 0 

Query: 73  VGTNVGDVMIW-------------------------EASLTRDYNASINRVMWSPDGTLF 117
           VGTNVGD+ +W                         +ASL +D   S+NR++WSPDGTLF
Sbjct: 368 VGTNVGDIGLWDVGTKERLVLRNFKVWDLTKCSMALQASLVKDPTVSVNRIIWSPDGTLF 427

[Close]
BLAST of CsGy3G022080.1 vs. Swiss-Prot
Match: sp|Q0WV90|TPR1_ARATH (Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3)

HSP 1 Score: 49.7 bits (117), Expect = 2.9e-05
Identity = 38/135 (28.15%), Postives = 59/135 (43.70%), Query Frame = 0 

Query: 7   NLLPLHQPQNRLGHVSFFFISHEDISKDKPLKLLNLTNPTPEKMNFMSNIGLLVAFIFEI 66
           N+LP+  P    GH +  F + +D+ K     L   ++P     + +    LL       
Sbjct: 321 NMLPMTFPGQAHGH-NQTFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLL------- 380

Query: 67  VYFFEDVGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWS 117
                 VGTNVGD+ +WE                         A+L ++   S+NRV+WS
Sbjct: 381 ------VGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWS 440

[Close]
BLAST of CsGy3G022080.1 vs. Swiss-Prot
Match: sp|Q27GK7|TPR4_ARATH (Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 5.0e-05
Identity = 25/69 (36.23%), Postives = 35/69 (50.72%), Query Frame = 0 

Query: 73  VGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWSPDGTLF 117
           VGTN+GD+ IWE                         ASL  +Y A++NRV+WSPDG L 
Sbjct: 375 VGTNLGDIAIWEVGSREKLVSRSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLL 434

[Close]
BLAST of CsGy3G022080.1 vs. Swiss-Prot
Match: sp|Q7X9V3|NSI_ARATH (Acetyltransferase NSI OS=Arabidopsis thaliana OX=3702 GN=NSI PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.5e-05
Identity = 19/24 (79.17%), Postives = 22/24 (91.67%), Query Frame = 0 

Query: 108 VVEFYRNLVFEPNPEGIKGMFWYP 132
           VV+FY+NL FE +PEGIKGMFWYP
Sbjct: 234 VVDFYQNLGFEADPEGIKGMFWYP 257

[Close]
BLAST of CsGy3G022080.1 vs. Swiss-Prot
Match: sp|A2Y5T7|SNAT1_ORYSI (Serotonin N-acetyltransferase 1, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SNAT1 PE=3 SV=3)

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 0 

Query: 108 VVEFYRNLVFEPNPEGIKGMFWYP 132
           VV+FY+NL FE +P+GIKGMFWYP
Sbjct: 229 VVDFYKNLGFEADPQGIKGMFWYP 252

[Close]
BLAST of CsGy3G022080.1 vs. TrEMBL
Match: tr|A0A2K3NPE8|A0A2K3NPE8_TRIPR (Topless-related protein 4-like OS=Trifolium pratense OX=57577 GN=L195_g001335 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.7e-07
Identity = 42/123 (34.15%), Postives = 60/123 (48.78%), Query Frame = 0 

Query: 7   NLLPLHQPQNRLGHVSFFFISHEDISKDKPLKLLNLTNPTPEKMNFMSNIGLLVAFIFEI 66
           NLLP+       G  S+   S +D+ K   L L   +N      + +  I LL       
Sbjct: 324 NLLPVGYSSQSHGQSSY---SSDDLPKTAVLTLNQGSNVKSMDFHPLQQIVLL------- 383

Query: 67  VYFFEDVGTNVGDVMIWE-------------ASLTRDYNASINRVMWSPDGTLFVVEFYR 117
                 VGTN+GDVM+W+             ASL+ +Y AS+NRV+WSPDGTL  V + +
Sbjct: 384 ------VGTNMGDVMVWDIGSRERIAHRNFKASLSNEYTASVNRVVWSPDGTLCSVAYSK 430

[Close]
BLAST of CsGy3G022080.1 vs. TrEMBL
Match: tr|A0A1S3C4D3|A0A1S3C4D3_CUCME (topless-related protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496740 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.8e-07
Identity = 34/69 (49.28%), Postives = 38/69 (55.07%), Query Frame = 0 

Query: 73  VGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWSPDGTLF 117
           VGTNVGDVMIWE                         ASL  DY ASINRVMWSPDGTLF
Sbjct: 374 VGTNVGDVMIWEVGGRERIAIRNFKVWDLSACSVPLQASLASDYTASINRVMWSPDGTLF 433

[Close]
BLAST of CsGy3G022080.1 vs. TrEMBL
Match: tr|A0A1S3AY24|A0A1S3AY24_CUCME (omega-hydroxypalmitate O-feruloyl transferase-like OS=Cucumis melo OX=3656 GN=LOC103483834 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.8e-07
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 21 VSFFFISHEDISKDKPLKLLNLTNPTPEKMNFMSNIGLLVAFIFEIVYFFED 73
          VS   IS EDI KD+P KLL+ +NPTPE+  F+SNI L VAF  E VYFFED
Sbjct: 3  VSPLSISDEDILKDEPQKLLSPSNPTPEETIFLSNIDLAVAFTVETVYFFED 54

[Close]
BLAST of CsGy3G022080.1 vs. TrEMBL
Match: tr|A0A1S3C417|A0A1S3C417_CUCME (topless-related protein 4-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103496740 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.8e-07
Identity = 34/69 (49.28%), Postives = 38/69 (55.07%), Query Frame = 0 

Query: 73  VGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWSPDGTLF 117
           VGTNVGDVMIWE                         ASL  DY ASINRVMWSPDGTLF
Sbjct: 373 VGTNVGDVMIWEVGGRERIAIRNFKVWDLSACSVPLQASLASDYTASINRVMWSPDGTLF 432

[Close]
BLAST of CsGy3G022080.1 vs. TrEMBL
Match: tr|A0A1S3C407|A0A1S3C407_CUCME (topless-related protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496740 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.8e-07
Identity = 34/69 (49.28%), Postives = 38/69 (55.07%), Query Frame = 0 

Query: 73  VGTNVGDVMIWE-------------------------ASLTRDYNASINRVMWSPDGTLF 117
           VGTNVGDVMIWE                         ASL  DY ASINRVMWSPDGTLF
Sbjct: 373 VGTNVGDVMIWEVGGRERIAIRNFKVWDLSACSVPLQASLASDYTASINRVMWSPDGTLF 432

The following BLAST results are available for this feature:
BLAST of CsGy3G022080.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022947949.14.6e-0759.62omega-hydroxypalmitate O-feruloyl transferase-like [Cucurbita moschata][more]
XP_023522514.14.6e-0759.62omega-hydroxypalmitate O-feruloyl transferase-like [Cucurbita pepo subsp. pepo] ... [more]
PNY04903.11.0e-0634.15topless-related protein 4-like [Trifolium pratense][more]
XP_004139298.11.3e-0649.28PREDICTED: topless-related protein 4 isoform X4 [Cucumis sativus][more]
XP_008456943.11.3e-0649.28PREDICTED: topless-related protein 4-like isoform X1 [Cucumis melo] >XP_00845695... [more]
BLAST of CsGy3G022080.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80490.21.6e-0628.15TOPLESS-related 1[more]
AT3G15880.22.8e-0636.23WUS-interacting protein 2[more]
AT1G32070.23.6e-0679.17nuclear shuttle interacting[more]
AT1G15750.16.1e-0636.23Transducin family protein / WD-40 repeat family protein[more]
BLAST of CsGy3G022080.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q10NY2|TPR3_ORYSJ7.7e-0637.68Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1[more]
sp|Q0WV90|TPR1_ARATH2.9e-0528.15Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3[more]
sp|Q27GK7|TPR4_ARATH5.0e-0536.23Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2[more]
sp|Q7X9V3|NSI_ARATH6.5e-0579.17Acetyltransferase NSI OS=Arabidopsis thaliana OX=3702 GN=NSI PE=1 SV=1[more]
sp|A2Y5T7|SNAT1_ORYSI1.1e-0475.00Serotonin N-acetyltransferase 1, chloroplastic OS=Oryza sativa subsp. indica OX=... [more]
BLAST of CsGy3G022080.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2K3NPE8|A0A2K3NPE8_TRIPR6.7e-0734.15Topless-related protein 4-like OS=Trifolium pratense OX=57577 GN=L195_g001335 PE... [more]
tr|A0A1S3C4D3|A0A1S3C4D3_CUCME8.8e-0749.28topless-related protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349674... [more]
tr|A0A1S3AY24|A0A1S3AY24_CUCME8.8e-0763.46omega-hydroxypalmitate O-feruloyl transferase-like OS=Cucumis melo OX=3656 GN=LO... [more]
tr|A0A1S3C417|A0A1S3C417_CUCME8.8e-0749.28topless-related protein 4-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC10349674... [more]
tr|A0A1S3C407|A0A1S3C407_CUCME8.8e-0749.28topless-related protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349674... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy3G022080CsGy3G022080gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy3G022080.1CsGy3G022080.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G022080.1.exon.1CsGy3G022080.1.exon.1exon
CsGy3G022080.1.exon.2CsGy3G022080.1.exon.2exon
CsGy3G022080.1.exon.3CsGy3G022080.1.exon.3exon
CsGy3G022080.1.exon.4CsGy3G022080.1.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G022080.1.CDS.1CsGy3G022080.1.CDS.1CDS
CsGy3G022080.1.CDS.2CsGy3G022080.1.CDS.2CDS
CsGy3G022080.1.CDS.3CsGy3G022080.1.CDS.3CDS
CsGy3G022080.1.CDS.4CsGy3G022080.1.CDS.4CDS