Cp4.1LG14g09900.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATATTAGTATATACTATCAGCTAAATTATAGAAAATATTTCCGACCAGGTTGACATTTTTACTTCGTATCAAATCCGTAAACTTTCTAATATTACAATAATACCCTTCAACTTTCAAACAAGTTTAAAAAAACGCCAATCAATACCTACATTCATAAAATTCATACCTCGTTTCCAGTAATACCCTCGATTTTTTTTTAATTTGCTTTAATATATTTAAAAAAAAAAAAGGAACGATTCTTAACGTTAGAATATGAACTTTCATTTCATGTGTCCCCGTCTAGTTTAATTTATTAATACTATAAGTAATGACATTTAAATTTATTTTTAAAGTTTATAAATATTATTAATTTAGGTTAATACATAATCATTTAAAGAAGTGTTTTTTTAATTGAATAATTATTAGGGTAAGATCCAAATGCTGGCTTACATTACAAAGATGATCAACCGCTGGGTTTACAGAGAGGAATCAGATTCTCCTCTTGCCGCCATCGTCAACGCCACTTTCCACACGCGACTCTCTCTCTCTCTCTCTCTCTCTCTGTTTCGGTGCGTCAAAGCCTTTTTCGGGGACCGCAAAAGGGCTGCTTCTTCCGTGACAAACAAGGCCTCGCATGGTGGGATCGGCCCTCAATCACCTTATTATGCAATCGTGAGTGCTTTCCACTTATTATGATCACTCAATAATGTCGTCATTTTCGTTTTTTCGATCTTGTTTTTCCATTTCTACTTGATTTTCACCATTTCAAATACGAAATGTCTCTCTCTTTTTCCTCTTTTTTGTCTCTGCTTTTTCCATGGCTGCTGTGTTATTTGAGCTATTAGATTGGGTTCTGTGCTGCTTTTGGTCGTTTTCTCTCAGTTGTGGATCTGTTTTCTTTCGTTTTTCATCGTTGAGATATTGGAGGTTGCTTTCAATCGTTCGATTTTGTCCAAATAAGTGGAAGACTTGCGATCTTTTTGAAGAAGAATCAAATTCTAAAGCGATTCTTATTTTTCGTTCAAACATTAGGTTTCTCTGTCTTCTTCATCAATTATTAGCTTCAATAATGCTCGTCTTTTCATGCTCTGTGTTCTTGCTGTGTCTTCCGAGAATTATTGGTGCTCTTACTTGCTTTCACAAAGTATTTCACGAATCATTCAGAAGATTTGAGGAAGTTTCTGTGTTAATTTACTGAATGGAAGTGTTTTTTGAGGGGAAAACAGATCATGTTTTACTGGTAGAAGAGAAGAAGACGGAGAAATAGAGTGGTAGAAGCGCTGTGAACATATGGGATCTTTCAAGGGCCATGTTCTTCCAGGGACGCTGTTTCTTCTGGTTGGTGTTTGGCACGTGTGGAGCGCTCTGCTTCGGTACGTGTCAAATCCCAGCTTGTTTCGCGTCCGTGTGTGGAACCCTGTGCCTGGCTTCAATGGAAAACTCAAATACTTAGAGCTTTATGTTGTTGTCATTGGGGGTTTCATTGATTTGTGCATTGAGCTTTTGTATTCAACTCATCTCAAGTTCTTCGTTAATGGAGTTTTGAACCCTTCGCACATGAACAACTTTGAACATTCGGGGATGCTTCTCATGTTCTTCATTTTTGGACTCGTCGCGCTGCTCTCTGAAAAGTCGAGGTAATTCTCTCTTGTTTCATGAACAAAGCATTTTCTATTCAGTGGTGTTTTAAAAGTTTAGGAAAATCTTGGAATGTTAACTTCTTCATTAAACTGTTTTGATTACTTTTGTTAAGATTTTGTTAAGATTATTAGATGAACTCGACTCTCCACAATAGTATGATATTGTCCACTTTGAGCATAAGCTCTCATAGCTTTGTTTTGGGCTTCCCCAAAATGCCTCATTCCAGTGGGGAGATAGTATTCCTAGAATATAAACCCATGATCATTCCCTACATTAGCCGATGTAGAACTTTCATCCAACACCTCCAACAAAGATCAGATGGGTTCATTTAGTTACTTTAGTTGAGTTAGTTTTTTTTTTTTTCATTCACGCAGAGTATTTTAAAAGTATCTATAACTTAGTTTTTGAGTTGAGTGGTAGTTTAATAGAATTATGATGGGTATAAGTCATTACTAGATAAGATATCAAATTAATGGTGGGAAGTATTGGGATTTTCTTTTCGGAAGGAATTTAAACCCGCAAGGACAAGGACAAGTAGATGAAAAATACCGAGGTTTAGGTCCGTGAAGTATCTGGTCTGGCTCGTTGCTTTGGTTTGCGTTTTCATTCAATCATCTTTGCATCTTAGGAACACATGTATGAAAAACAAGTGATATTAAATTGAAAGCAACAGCAGTTTCTTGTATATATGTCATAATTTAAGCTGTGCCGTTCTTGATCTTCGCTTGAAAGACAATTTTCTTCCCCAATTTCTGCTATCTATCAGTTTGTAGGAGTTTGTAATCCAGAATTTGAAGTTGTAACAGACCAAGCCCACCGCTAGTAGAAATTGTTTGCTTTGGCCTATTACGTATCGCTATTAGTCTCATGGTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTTCCCTCTCCAACCGATGTGGGATCTCACAATCCACCCCCTTGGGGGCCAGCGTCCTCGCTGGCACACCGCTTGGTGCCTGGTTCTGATACCATTTGTAACGGCTCAAACCCACCGCTAGTAGATATTGTCCGCTTTAGCCCGTTACGTATCGCCATGAGCCTCATGGTTTTAAAACACGTCTAATAGGGAGAGGTTTCTACACCCTTATAAGGAATGTTTCGTTCCCCTCTCCAACTGATGTGGGAAATATTCAAATATTGAATTTAGCTGTGAATTTTCTGTTTCTAAGTTTATGTGCAGTTTATCCTTTACTATGTCTTAATCACTAGTTTTCTCTGAAAGAGAGCTGATTAATCCACTCTCACCTATTTGCATTCAGATTTGTTCGCCTACCAGATGAAGCGCTTTGCCTGATTGCTTCCACGGCATTCTGCGCTGAGTATCTATTGTTTTACTTTCATTCAACTACTCATAAAGGCCTTGAAGGTTACTACCATATTCTCCTTGTCCTCTTGATAGGCCTCTGCATTTTGTCGACGGTTGCTGGAGCTATTTTACCTACCAGCTTTCCAGTCGACATGTGCAGCGGCATCGCCATCACCCTTCAGGGCCTTTGGTTTTATCAGACAGCCTTCACTCTGTATGGTCCAATGATGCCTGATGGTTGTGAGCTCAAGGACGATATGATGGTCATGTGTCATTCAAAAGATAGTGAGGTTAGAGGTGAATTCCTTGCAAATTTCCAGCTCTTTTCGATGGTCCTCGGAGTTCTTGGCGGAGTCGTAGGAGTTTACTGCTTTGTAGCAGCAAAGTACGGGTGTTCTGACCTCGGGAGCTCGAATGCCATCCATGCTCAAGACTAGATTATTTCCAGGTATGTATGCATCAGAACTTTCATCTTTTGGTAGGATTCTCTAGGTGACTTCTAGTTTTGTTTCTTGCATAAAAACTTCTTTAGCTTCATTTAGAAACTCATGCCATGTTACTAAAGTTGTTCATCTAGTTTTCGAGTAATATAAAAATGGTTTAAAAGACGTAAACAACACCTAAACGTGATTTACGTTAAAACCCCCCTAGTGATTTTTTATTGAACACTTTTACTCGAGTTCTTATCATTGAAACACTTTTATTAGAAGTATTTATTCTAGAAGCACTTTCAAATACACTTGAAATACAATCTAGTAAAGCTCGTGATTGTCATATACACACGTATATTAGAGAAAAACGATACTTAACTATTTCATGTTATTAGTTTTGTCTCCGAGTTTAAGGTTAAATTTTTATGAAATTAAAAGTTTAAGGACTTATTCGTGAAATACAGGGGAAAAGTAACTTCCACGAACCAGGAAGAAAAGAAGGAAAAGGGATGGAGAATTGCAGTTGTGCCCTTTTACAGTTCACTTTGCAATACTTTTGAGGCAAGTAGTTCTCTATAATCCTTCTCCAATGACTTTCCACGATCTTGTTGCTTAAGTTCTTTCTGTGTAATCATGTGCCATTTTATTCTTTTGGGGGACTTCGATTGAAAATTATAGCTTCTTTTGAGCACCTCCCTTCACTATTTACCCTAACAACAACATTTAAGAATAATGGTTCGGGGCACCATCTTGAGCGTAGCTCCTCAACTGGTTAAAGCATATATTTGTTCTAGAATGTCAACTATCGAGATCTACCAGATACTATATTAGAGTTAACCGTCGAGATCTACTAACCAGATGCTATATTAGGGTTAACTATCGATATCTACCAACTAGATACTGTATTAGAGTCAATTGTCGAGATTTATTAACCAGATACTATGTTAGTATTAAGATGCTTTATGAATGATATACTTTTCAACTCGATTTTGTTTTTCAATTTGATTTGGATATGAAATTGTAACTTTCGAGCTAAAATGACCTACATGGTA CATATTAGTATATACTATCAGCTAAATTATAGAAAATATTTCCGACCAGGTTGACATTTTTACTTCGTATCAAATCCGTAAACTTTCTAATATTACAATAATACCCTTCAACTTTCAAACAAGTTTAAAAAAACGCCAATCAATACCTACATTCATAAAATTCATACCTCGTTTCCAGTAATACCCTCGATTTTTTTTTAATTTGCTTTAATATATTTAAAAAAAAAAAAGGAACGATTCTTAACGTTAGAATATGAACTTTCATTTCATGTGTCCCCGTCTAGTTTAATTTATTAATACTATAAGTAATGACATTTAAATTTATTTTTAAAGTTTATAAATATTATTAATTTAGGTTAATACATAATCATTTAAAGAAGTGTTTTTTTAATTGAATAATTATTAGGGTAAGATCCAAATGCTGGCTTACATTACAAAGATGATCAACCGCTGGGTTTACAGAGAGGAATCAGATTCTCCTCTTGCCGCCATCGTCAACGCCACTTTCCACACGCGACTCTCTCTCTCTCTCTCTCTCTCTCTGTTTCGGTGCGTCAAAGCCTTTTTCGGGGACCGCAAAAGGGCTGCTTCTTCCGTGACAAACAAGGCCTCGCATGGTGGGATCGGCCCTCAATCACCTTATTATGCAATCATCATGTTTTACTGGTAGAAGAGAAGAAGACGGAGAAATAGAGTGGTAGAAGCGCTGTGAACATATGGGATCTTTCAAGGGCCATGTTCTTCCAGGGACGCTGTTTCTTCTGGTTGGTGTTTGGCACGTGTGGAGCGCTCTGCTTCGGTACGTGTCAAATCCCAGCTTGTTTCGCGTCCGTGTGTGGAACCCTGTGCCTGGCTTCAATGGAAAACTCAAATACTTAGAGCTTTATGTTGTTGTCATTGGGGGTTTCATTGATTTGTGCATTGAGCTTTTGTATTCAACTCATCTCAAGTTCTTCGTTAATGGAGTTTTGAACCCTTCGCACATGAACAACTTTGAACATTCGGGGATGCTTCTCATGTTCTTCATTTTTGGACTCGTCGCGCTGCTCTCTGAAAAGTCGAGATTTGTTCGCCTACCAGATGAAGCGCTTTGCCTGATTGCTTCCACGGCATTCTGCGCTGAGTATCTATTGTTTTACTTTCATTCAACTACTCATAAAGGCCTTGAAGGTTACTACCATATTCTCCTTGTCCTCTTGATAGGCCTCTGCATTTTGTCGACGGTTGCTGGAGCTATTTTACCTACCAGCTTTCCAGTCGACATGTGCAGCGGCATCGCCATCACCCTTCAGGGCCTTTGGTTTTATCAGACAGCCTTCACTCTGTATGGTCCAATGATGCCTGATGGTTGTGAGCTCAAGGACGATATGATGGTCATGTGTCATTCAAAAGATAGTGAGGTTAGAGGTGAATTCCTTGCAAATTTCCAGCTCTTTTCGATGGTCCTCGGAGTTCTTGGCGGAGTCGTAGGAGTTTACTGCTTTGTAGCAGCAAAGTACGGGTGTTCTGACCTCGGGAGCTCGAATGCCATCCATGCTCAAGACTAGATTATTTCCAGGGGAAAAGTAACTTCCACGAACCAGGAAGAAAAGAAGGAAAAGGGATGGAGAATTGCAGTTGTGCCCTTTTACAGTTCACTTTGCAATACTTTTGAGGCAAGTAGTTCTCTATAATCCTTCTCCAATGACTTTCCACGATCTTGTTGCTTAAGTTCTTTCTGTGTAATCATGTGCCATTTTATTCTTTTGGGGGACTTCGATTGAAAATTATAGCTTCTTTTGAGCACCTCCCTTCACTATTTACCCTAACAACAACATTTAAGAATAATGGTTCGGGGCACCATCTTGAGCGTAGCTCCTCAACTGGTTAAAGCATATATTTGTTCTAGAATGTCAACTATCGAGATCTACCAGATACTATATTAGAGTTAACCGTCGAGATCTACTAACCAGATGCTATATTAGGGTTAACTATCGATATCTACCAACTAGATACTGTATTAGAGTCAATTGTCGAGATTTATTAACCAGATACTATGTTAGTATTAAGATGCTTTATGAATGATATACTTTTCAACTCGATTTTGTTTTTCAATTTGATTTGGATATGAAATTGTAACTTTCGAGCTAAAATGACCTACATGGTA ATGGGATCTTTCAAGGGCCATGTTCTTCCAGGGACGCTGTTTCTTCTGGTTGGTGTTTGGCACGTGTGGAGCGCTCTGCTTCGGTACGTGTCAAATCCCAGCTTGTTTCGCGTCCGTGTGTGGAACCCTGTGCCTGGCTTCAATGGAAAACTCAAATACTTAGAGCTTTATGTTGTTGTCATTGGGGGTTTCATTGATTTGTGCATTGAGCTTTTGTATTCAACTCATCTCAAGTTCTTCGTTAATGGAGTTTTGAACCCTTCGCACATGAACAACTTTGAACATTCGGGGATGCTTCTCATGTTCTTCATTTTTGGACTCGTCGCGCTGCTCTCTGAAAAGTCGAGATTTGTTCGCCTACCAGATGAAGCGCTTTGCCTGATTGCTTCCACGGCATTCTGCGCTGAGTATCTATTGTTTTACTTTCATTCAACTACTCATAAAGGCCTTGAAGGTTACTACCATATTCTCCTTGTCCTCTTGATAGGCCTCTGCATTTTGTCGACGGTTGCTGGAGCTATTTTACCTACCAGCTTTCCAGTCGACATGTGCAGCGGCATCGCCATCACCCTTCAGGGCCTTTGGTTTTATCAGACAGCCTTCACTCTGTATGGTCCAATGATGCCTGATGGTTGTGAGCTCAAGGACGATATGATGGTCATGTGTCATTCAAAAGATAGTGAGGTTAGAGGTGAATTCCTTGCAAATTTCCAGCTCTTTTCGATGGTCCTCGGAGTTCTTGGCGGAGTCGTAGGAGTTTACTGCTTTGTAGCAGCAAAGTACGGGTGTTCTGACCTCGGGAGCTCGAATGCCATCCATGCTCAAGACTAG MGSFKGHVLPGTLFLLVGVWHVWSALLRYVSNPSLFRVRVWNPVPGFNGKLKYLELYVVVIGGFIDLCIELLYSTHLKFFVNGVLNPSHMNNFEHSGMLLMFFIFGLVALLSEKSRFVRLPDEALCLIASTAFCAEYLLFYFHSTTHKGLEGYYHILLVLLIGLCILSTVAGAILPTSFPVDMCSGIAITLQGLWFYQTAFTLYGPMMPDGCELKDDMMVMCHSKDSEVRGEFLANFQLFSMVLGVLGGVVGVYCFVAAKYGCSDLGSSNAIHAQD
BLAST of Cp4.1LG14g09900.1 vs. Swiss-Prot
Match: TM45B_DANRE (Transmembrane protein 45B OS=Danio rerio GN=tmem45b PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11 Identity = 59/208 (28.37%), Postives = 92/208 (44.23%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. Swiss-Prot
Match: TM45A_HUMAN (Transmembrane protein 45A OS=Homo sapiens GN=TMEM45A PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.5e-11 Identity = 58/219 (26.48%), Postives = 95/219 (43.38%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. Swiss-Prot
Match: TM45B_BOVIN (Transmembrane protein 45B OS=Bos taurus GN=TMEM45B PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.3e-11 Identity = 58/211 (27.49%), Postives = 99/211 (46.92%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. Swiss-Prot
Match: TM45B_XENLA (Transmembrane protein 45B OS=Xenopus laevis GN=tmem45b PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10 Identity = 60/213 (28.17%), Postives = 93/213 (43.66%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. Swiss-Prot
Match: TM45B_MOUSE (Transmembrane protein 45B OS=Mus musculus GN=Tmem45b PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10 Identity = 60/223 (26.91%), Postives = 100/223 (44.84%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TrEMBL
Match: A0A0A0L1Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G006600 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 4.6e-145 Identity = 254/272 (93.38%), Postives = 265/272 (97.43%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TrEMBL
Match: M5WV49_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009929mg PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 1.5e-124 Identity = 217/272 (79.78%), Postives = 245/272 (90.07%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TrEMBL
Match: A0A061G629_THECC (C globular stage isoform 1 OS=Theobroma cacao GN=TCM_016657 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 3.8e-123 Identity = 215/272 (79.04%), Postives = 240/272 (88.24%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TrEMBL
Match: B9S1J1_RICCO (Transmembrane protein 45a, putative OS=Ricinus communis GN=RCOM_0865410 PE=4 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 3.2e-122 Identity = 214/272 (78.68%), Postives = 245/272 (90.07%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TrEMBL
Match: A0A067DAP9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023730mg PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 9.4e-122 Identity = 212/272 (77.94%), Postives = 239/272 (87.87%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TAIR10
Match: AT1G32120.1 (AT1G32120.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 428.3 bits (1100), Expect = 3.5e-120 Identity = 204/264 (77.27%), Postives = 234/264 (88.64%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TAIR10
Match: AT1G55240.1 (AT1G55240.1 Family of unknown function (DUF716) ) HSP 1 Score: 163.3 bits (412), Expect = 2.1e-40 Identity = 93/287 (32.40%), Postives = 163/287 (56.79%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TAIR10
Match: AT1G55230.1 (AT1G55230.1 Family of unknown function (DUF716) ) HSP 1 Score: 152.5 bits (384), Expect = 3.7e-37 Identity = 86/269 (31.97%), Postives = 145/269 (53.90%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TAIR10
Match: AT5G19870.1 (AT5G19870.1 Family of unknown function (DUF716) ) HSP 1 Score: 131.3 bits (329), Expect = 8.9e-31 Identity = 79/269 (29.37%), Postives = 142/269 (52.79%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. TAIR10
Match: AT1G49470.1 (AT1G49470.1 Family of unknown function (DUF716) ) HSP 1 Score: 130.6 bits (327), Expect = 1.5e-30 Identity = 87/276 (31.52%), Postives = 132/276 (47.83%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. NCBI nr
Match: gi|659095474|ref|XP_008448600.1| (PREDICTED: transmembrane protein 45B [Cucumis melo]) HSP 1 Score: 531.9 bits (1369), Expect = 6.4e-148 Identity = 259/272 (95.22%), Postives = 267/272 (98.16%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. NCBI nr
Match: gi|449456761|ref|XP_004146117.1| (PREDICTED: transmembrane protein 45B [Cucumis sativus]) HSP 1 Score: 521.9 bits (1343), Expect = 6.6e-145 Identity = 254/272 (93.38%), Postives = 265/272 (97.43%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. NCBI nr
Match: gi|645265345|ref|XP_008238108.1| (PREDICTED: transmembrane protein 45A [Prunus mume]) HSP 1 Score: 459.1 bits (1180), Expect = 5.3e-126 Identity = 220/272 (80.88%), Postives = 248/272 (91.18%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. NCBI nr
Match: gi|595848144|ref|XP_007209466.1| (hypothetical protein PRUPE_ppa009929mg [Prunus persica]) HSP 1 Score: 453.8 bits (1166), Expect = 2.2e-124 Identity = 217/272 (79.78%), Postives = 245/272 (90.07%), Query Frame = 1
BLAST of Cp4.1LG14g09900.1 vs. NCBI nr
Match: gi|1009158490|ref|XP_015897318.1| (PREDICTED: transmembrane protein 45A-like [Ziziphus jujuba]) HSP 1 Score: 450.3 bits (1157), Expect = 2.5e-123 Identity = 212/268 (79.10%), Postives = 241/268 (89.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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