Cp4.1LG11g03520.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g03520.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	WRKY protein
Location	Cp4.1LG11 : 1979817 .. 1981052 (+)
Sequence length	405

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTACAATAGTAACCAGCACCTTGTTATGTCGGAGAACGATCTTCCCGAGCAGCCGGGGTTCGAGTTTACGGACTGGATGTTCGATAGGTGGCTCGATGAAAACTCTCCGCCTCTGGTCGACTCGGCGATGTACCCGGTTTATCAGTCGGGGGAGATTGAGGAGTTTGTTGGAAGCACAATTCAGCAAGGAGAACCTAGCAGTAGTAAGCATAACTCTTATTATTACATTTTAGTGATTGTAAGTCTTTTCTGCTAACCATCACTAAAATGGGAGTTCCCATGTCAGTTGGGGAGGAGAACAAAATATTCTTTATAAGAGTGTGGAAACCTCTCCCTAACAGGTGCGTTTTAAAACCGTGAGGCTGATGGCAATACATAATAAACCAAAGCAGACAATAGTTGCTAGCGGTGGGCTTGAGCTGTTACAAATGGTATTAGAGCTAGACACTGGGTAGTGTGCCAGCGAGGACGCTGGAGCCCAATGGTGTGGATTGTGAGGTCCCACATTGGTTGAAGAGGAGAACGAAGTTTTCCATATAAGAGTGTGGAAACCTCTCCTTAACAGACACATTTAAAACTGTGAGGCTAACGGCGATACGTAACGAGCGAAAGCAGACAATATCTTCTAACAGTGGGCATGGGTTGTTACAAATGGTATCAGAGCCAAACACTGAGTGGTGCCAGCGAGGACGCTGGCCCCCAAGGGAGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAGCGAAGCATTTAAGGGTGTGGAAACCTCTCCCTAACAGACGCGTTTTAAAATCTTGAGGTTGACGGCGATACGTTATGAGTCAAAGTGGATAATATCTGCTAATAGTAGACTTTCATGGCCGGATGAATGATGTTTAATGGTGTTAGTAGGAGACAGTGGGAGAGAGAGGGAAGTTAGAGAAAGATTTGCATTCAAGACCAAATCAGAAGTTGAGGTTCTAGATGATGGTTTCAAGTGGAGGAAGTATGGAAAGAAGATGGTGAAGAACAGCCCAAATCCGAGGTAAGAAAATGAATTCTGTCTAAACATAAACATAACATGTTTCATTGTTAATCCGGTTTGGCTCGACCATCTACGAAATGCAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCAGTGAAGAAGAGAGTCGAGAGAGATCGAGAGGATCCAAAATACGTGATAACGACTTACGAGGGTGTTCATACTCATGAAAGTTCTTGA

mRNA sequence

ATGTCTTACAATAGTAACCAGCACCTTGTTATGTCGGAGAACGATCTTCCCGAGCAGCCGGGGTTCGAGTTTACGGACTGGATGTTCGATAGGTGGCTCGATGAAAACTCTCCGCCTCTGGTCGACTCGGCGATGTACCCGGTTTATCAGTCGGGGGAGATTGAGGAGTTTGTTGGAAGCACAATTCAGCAAGGAGAACCTAGCAGTAAAGTTGAGGTTCTAGATGATGGTTTCAAGTGGAGGAAGTATGGAAAGAAGATGGTGAAGAACAGCCCAAATCCGAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCAGTGAAGAAGAGAGTCGAGAGAGATCGAGAGGATCCAAAATACGTGATAACGACTTACGAGGGTGTTCATACTCATGAAAGTTCTTGA

Coding sequence (CDS)

ATGTCTTACAATAGTAACCAGCACCTTGTTATGTCGGAGAACGATCTTCCCGAGCAGCCGGGGTTCGAGTTTACGGACTGGATGTTCGATAGGTGGCTCGATGAAAACTCTCCGCCTCTGGTCGACTCGGCGATGTACCCGGTTTATCAGTCGGGGGAGATTGAGGAGTTTGTTGGAAGCACAATTCAGCAAGGAGAACCTAGCAGTAAAGTTGAGGTTCTAGATGATGGTTTCAAGTGGAGGAAGTATGGAAAGAAGATGGTGAAGAACAGCCCAAATCCGAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCAGTGAAGAAGAGAGTCGAGAGAGATCGAGAGGATCCAAAATACGTGATAACGACTTACGAGGGTGTTCATACTCATGAAAGTTCTTGA

Protein sequence

MSYNSNQHLVMSENDLPEQPGFEFTDWMFDRWLDENSPPLVDSAMYPVYQSGEIEEFVGSTIQQGEPSSKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTHESS

Homology

[Close]

BLAST of Cp4.1LG11g03520.1 vs. Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-28
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 1


Query: 69  SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 128
           S+VEVLDDGFKWRKYGKKMVKNSP+PRNYYKCSV+GCPVKKRVERDR+DP +VITTYEG 
Sbjct: 107 SEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGS 166

Query: 129 HTHES 134
           H H S
Sbjct: 167 HNHSS 171

[Close]

BLAST of Cp4.1LG11g03520.1 vs. Swiss-Prot
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.8e-24
Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 1


Query: 69  SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 128
           SK++V+DDGFKWRKYGKK VKN+ N RNYYKCS EGC VKKRVERD +D  YVITTYEGV
Sbjct: 104 SKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGV 163

Query: 129 HTHES 134
           H HES
Sbjct: 164 HNHES 168

[Close]

BLAST of Cp4.1LG11g03520.1 vs. Swiss-Prot
Match: WRK46_HORVU (WRKY transcription factor SUSIBA2 OS=Hordeum vulgare GN=WRKY46 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-21
Identity = 43/64 (67.19%), Postives = 54/64 (84.38%), Query Frame = 1


Query: 69  SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 128
           S+V++LDDG++WRKYG+K+VK +PNPR+YYKC+  GCPV+K VER   DPK VITTYEG 
Sbjct: 357 SEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCPVRKHVERASHDPKSVITTYEGK 416

Query: 129 HTHE 133
           H HE
Sbjct: 417 HNHE 420

[Close]

BLAST of Cp4.1LG11g03520.1 vs. Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.5e-21
Identity = 41/64 (64.06%), Postives = 54/64 (84.38%), Query Frame = 1


Query: 69  SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 128
           S+V++LDDG++WRKYG+K+V+ +PNPR+YYKC+  GCPV+K VER   DPK VITTYEG 
Sbjct: 375 SEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTAHGCPVRKHVERASHDPKAVITTYEGK 434

Query: 129 HTHE 133
           H H+
Sbjct: 435 HDHD 438

[Close]

BLAST of Cp4.1LG11g03520.1 vs. Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-19
Identity = 40/67 (59.70%), Postives = 55/67 (82.09%), Query Frame = 1


Query: 66  EPSSKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTY 125
           + +S +++LDDG++WRKYG+K+VK +PNPR+YYKC+  GC V+K VER  +DPK VITTY
Sbjct: 225 QTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTY 284

Query: 126 EGVHTHE 133
           EG H H+
Sbjct: 285 EGKHKHQ 291

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TrEMBL
Match: A0A0A0KD40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363560 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.4e-62
Identity = 118/153 (77.12%), Postives = 125/153 (81.70%), Query Frame = 1


Query: 1   MSYNSNQHLVMSENDLPEQPGFEFTDWMFDRWLDENSPPLVDSAMYPVYQSGEIEEFVGS 60
           MSYNSNQHL  SE+DL EQPGFEFTDWMFD WL+ENS  L DS MYPVYQ GE++EFVG+
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TIQQGEPSSK-------------------VEVLDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           TIQQGEPSS+                   VE+LDDGFKWRKYGKKMVKNSPNPRNYYKCS
Sbjct: 61  TIQQGEPSSRDYGREREIRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120

Query: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 135
           VEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TrEMBL
Match: F8WL84_CITUN (WRKY DNA-binding protein OS=Citrus unshiu GN=ORF17 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-32
Identity = 76/146 (52.05%), Postives = 94/146 (64.38%), Query Frame = 1


Query: 13  ENDLPEQPGFEFTDWM-FDRWL-DENSPPLVDSAMYPVYQSGEIEEFVGSTIQQGEPS-- 72
           E+D  E+  FE ++++ FD W  D+ +  L      PVY++ E+ E  G++     PS  
Sbjct: 44  ESDSAEKTNFELSEYLTFDEWFEDDQASKLFGYVQNPVYRANEVVEPGGTSTHFEGPSNS 103

Query: 73  --------------------SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVK 132
                               S VE+LDDGFKWRKYGKKMVKNSPNPRNYYKCSV+GCPVK
Sbjct: 104 DNDSGREKKPVKERVAFKTKSDVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCPVK 163

Query: 133 KRVERDREDPKYVITTYEGVHTHESS 135
           KRVERDR+DP YVITTYEG HTH+S+
Sbjct: 164 KRVERDRDDPSYVITTYEGFHTHQSN 189

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TrEMBL
Match: A0A067GDY4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031482mg PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-32
Identity = 76/146 (52.05%), Postives = 94/146 (64.38%), Query Frame = 1


Query: 13  ENDLPEQPGFEFTDWM-FDRWL-DENSPPLVDSAMYPVYQSGEIEEFVGSTIQQGEPS-- 72
           E+D  E+  FE ++++ FD W  D+ +  L      PVY++ E+ E  G++     PS  
Sbjct: 13  ESDSAEKTNFELSEYLTFDEWFEDDQASKLFGYVQNPVYRANEVVEPGGTSTHFEGPSNS 72

Query: 73  --------------------SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVK 132
                               S VE+LDDGFKWRKYGKKMVKNSPNPRNYYKCSV+GCPVK
Sbjct: 73  DNDSGREKKPVKERVAFKTKSDVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCPVK 132

Query: 133 KRVERDREDPKYVITTYEGVHTHESS 135
           KRVERDR+DP YVITTYEG HTH+S+
Sbjct: 133 KRVERDRDDPSYVITTYEGFHTHQSN 158

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TrEMBL
Match: V4UPS5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009761mg PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-32
Identity = 76/146 (52.05%), Postives = 94/146 (64.38%), Query Frame = 1


Query: 13  ENDLPEQPGFEFTDWM-FDRWL-DENSPPLVDSAMYPVYQSGEIEEFVGSTIQQGEPS-- 72
           E+D  E+  FE ++++ FD W  D+ +  L      PVY++ E+ E  G++     PS  
Sbjct: 13  ESDSAEKTNFELSEYLTFDEWFEDDQASKLFGYVQNPVYRANEVVEPGGTSTHFEGPSNS 72

Query: 73  --------------------SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVK 132
                               S VE+LDDGFKWRKYGKKMVKNSPNPRNYYKCSV+GCPVK
Sbjct: 73  DNDSGREKKPVKERVAFKTKSDVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCPVK 132

Query: 133 KRVERDREDPKYVITTYEGVHTHESS 135
           KRVERDR+DP YVITTYEG HTH+S+
Sbjct: 133 KRVERDRDDPSYVITTYEGFHTHQSN 158

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TrEMBL
Match: A0A059CLX9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00675 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.7e-32
Identity = 73/141 (51.77%), Postives = 92/141 (65.25%), Query Frame = 1


Query: 15  DLPEQPGFEFTDWM-FDRWLDENSPPLVDSAMYPV-YQSGEIEEFVGSTIQQGEPS---- 74
           D  +Q  FE ++++  D WL ++   +V  A     YQS E ++ +GS+     PS    
Sbjct: 16  DFNDQSDFELSEFLKIDEWLGDDPASMVHGAPANYFYQSNEADDSIGSSSNPEGPSRHAE 75

Query: 75  -----------------SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRV 133
                            S+VE+LDDGFKWRKYGKKMVKNSPNPRNYY+CSVEGCPVKKRV
Sbjct: 76  GGKEKKEVKERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRV 135

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TAIR10
Match: AT5G26170.1 (AT5G26170.1 WRKY DNA-binding protein 50)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 1


Query: 69  SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 128
           S+VEVLDDGFKWRKYGKKMVKNSP+PRNYYKCSV+GCPVKKRVERDR+DP +VITTYEG 
Sbjct: 107 SEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGS 166

Query: 129 HTHES 134
           H H S
Sbjct: 167 HNHSS 171

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TAIR10
Match: AT5G64810.1 (AT5G64810.1 WRKY DNA-binding protein 51)

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-25
Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 1


Query: 69  SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 128
           SK++V+DDGFKWRKYGKK VKN+ N RNYYKCS EGC VKKRVERD +D  YVITTYEGV
Sbjct: 104 SKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGV 163

Query: 129 HTHES 134
           H HES
Sbjct: 164 HNHES 168

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TAIR10
Match: AT4G26640.2 (AT4G26640.2 WRKY family transcription factor family protein)

HSP 1 Score: 101.3 bits (251), Expect = 4.8e-22
Identity = 41/64 (64.06%), Postives = 54/64 (84.38%), Query Frame = 1


Query: 69  SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 128
           S+V++LDDG++WRKYG+K+V+ +PNPR+YYKC+  GCPV+K VER   DPK VITTYEG 
Sbjct: 375 SEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTAHGCPVRKHVERASHDPKAVITTYEGK 434

Query: 129 HTHE 133
           H H+
Sbjct: 435 HDHD 438

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TAIR10
Match: AT5G07100.1 (AT5G07100.1 WRKY DNA-binding protein 26)

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20
Identity = 40/67 (59.70%), Postives = 55/67 (82.09%), Query Frame = 1


Query: 66  EPSSKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTY 125
           + +S +++LDDG++WRKYG+K+VK +PNPR+YYKC+  GC V+K VER  +DPK VITTY
Sbjct: 225 QTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTY 284

Query: 126 EGVHTHE 133
           EG H H+
Sbjct: 285 EGKHKHQ 291

[Close]

BLAST of Cp4.1LG11g03520.1 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 1


Query: 69  SKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 128
           S ++ LDDG++WRKYG+K VKNSP PR+YY+C+  GC VKKRVER  +DP  V+TTYEG 
Sbjct: 215 SDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQ 274

Query: 129 HTH 132
           HTH
Sbjct: 275 HTH 277

[Close]

BLAST of Cp4.1LG11g03520.1 vs. NCBI nr
Match: gi|449453049|ref|XP_004144271.1| (PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 2.0e-62
Identity = 118/153 (77.12%), Postives = 125/153 (81.70%), Query Frame = 1


Query: 1   MSYNSNQHLVMSENDLPEQPGFEFTDWMFDRWLDENSPPLVDSAMYPVYQSGEIEEFVGS 60
           MSYNSNQHL  SE+DL EQPGFEFTDWMFD WL+ENS  L DS MYPVYQ GE++EFVG+
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TIQQGEPSSK-------------------VEVLDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           TIQQGEPSS+                   VE+LDDGFKWRKYGKKMVKNSPNPRNYYKCS
Sbjct: 61  TIQQGEPSSRDYGREREIRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120

Query: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 135
           VEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of Cp4.1LG11g03520.1 vs. NCBI nr
Match: gi|659089459|ref|XP_008445519.1| (PREDICTED: probable WRKY transcription factor 50 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 9.9e-62
Identity = 117/153 (76.47%), Postives = 124/153 (81.05%), Query Frame = 1


Query: 1   MSYNSNQHLVMSENDLPEQPGFEFTDWMFDRWLDENSPPLVDSAMYPVYQSGEIEEFVGS 60
           MSYNSNQHL  SE+DL EQPGFEFTDWMFD WL+ENS  L DS MYPVYQ GE++EFVG+
Sbjct: 1   MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSTLTDSVMYPVYQEGEVDEFVGN 60

Query: 61  TIQQGEPSSK-------------------VEVLDDGFKWRKYGKKMVKNSPNPRNYYKCS 120
           TIQQ EPSS+                   VE+LDDGFKWRKYGKKMVKNSPNPRNYYKCS
Sbjct: 61  TIQQAEPSSRDHGREREVRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCS 120

Query: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 135
           VEGCPVKKRVERDREDPKYVITTYEGVHTHESS
Sbjct: 121 VEGCPVKKRVERDREDPKYVITTYEGVHTHESS 153

[Close]

BLAST of Cp4.1LG11g03520.1 vs. NCBI nr
Match: gi|778715287|ref|XP_011657375.1| (PREDICTED: probable WRKY transcription factor 50 isoform X2 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-47
Identity = 95/126 (75.40%), Postives = 101/126 (80.16%), Query Frame = 1


Query: 28  MFDRWLDENSPPLVDSAMYPVYQSGEIEEFVGSTIQQGEPSSK----------------- 87
           MFD WL+ENS  L DS MYPVYQ GE++EFVG+TIQQGEPSS+                 
Sbjct: 1   MFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGNTIQQGEPSSRDYGREREIRERFAFKTK 60

Query: 88  --VEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 135
             VE+LDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV
Sbjct: 61  SEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGV 120

[Close]

BLAST of Cp4.1LG11g03520.1 vs. NCBI nr
Match: gi|645227462|ref|XP_008220528.1| (PREDICTED: probable WRKY transcription factor 50 isoform X2 [Prunus mume])

HSP 1 Score: 152.5 bits (384), Expect = 5.1e-34
Identity = 77/148 (52.03%), Postives = 98/148 (66.22%), Query Frame = 1


Query: 13  ENDLPEQPGFEFTDW-MFDRWLDEN--SPPLVDSAMYPVYQSGEIEEFVGSTIQQG---- 72
           END  +Q  FEF+++ M   WLDE+  +   +++     YQ+ E++E  GS+ Q G    
Sbjct: 14  ENDFSDQSNFEFSEYLMIGEWLDEDHRTSMALETVQNSGYQANEVDESRGSSSQLGGSNS 73

Query: 73  --------------------EPSSKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGC 132
                               +  S+VE+LDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGC
Sbjct: 74  RENESGTVRERQEVRERVAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGC 133

Query: 133 PVKKRVERDREDPKYVITTYEGVHTHES 134
           PVKKRVERDR+DP++VITTYEG+H H+S
Sbjct: 134 PVKKRVERDRDDPRFVITTYEGIHNHQS 161

[Close]

BLAST of Cp4.1LG11g03520.1 vs. NCBI nr
Match: gi|1009134425|ref|XP_015884439.1| (PREDICTED: probable WRKY transcription factor 50 [Ziziphus jujuba])

HSP 1 Score: 152.5 bits (384), Expect = 5.1e-34
Identity = 79/146 (54.11%), Postives = 96/146 (65.75%), Query Frame = 1


Query: 13  ENDLPEQPGFEFTDW-MFDRWLDENSPPLVDSAMY-PVYQSGEIEEFVGSTIQQG----- 72
           END  E   FE  ++ MFD WL E+   +V  ++  PVYQ+ E ++  G +   G     
Sbjct: 27  ENDFAEGSNFELNEFLMFDDWLGEDPASMVSGSLTNPVYQASEGDDPSGGSSHIGGHTSR 86

Query: 73  -----------------EPSSKVEVLDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVK 132
                            +  S+VE+L+DGFKWRKYGKKMVKNSPNPRNYY+CSVEGCPVK
Sbjct: 87  ENEGLREKKETRERVAFKTKSEVEILEDGFKWRKYGKKMVKNSPNPRNYYRCSVEGCPVK 146

Query: 133 KRVERDREDPKYVITTYEGVHTHESS 135
           KRVERDREDP+YVITTYEGVH H+SS
Sbjct: 147 KRVERDREDPRYVITTYEGVHNHQSS 172

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g03520.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK50_ARATH	1.9e-28	86.15	Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=2 SV=...	[more]
WRK51_ARATH	2.8e-24	78.46	Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=1 SV=...	[more]
WRK46_HORVU	2.9e-21	67.19	WRKY transcription factor SUSIBA2 OS=Hordeum vulgare GN=WRKY46 PE=1 SV=1	[more]
WRK20_ARATH	8.5e-21	64.06	Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=...	[more]
WRK26_ARATH	2.1e-19	59.70	Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=1 SV=...	[more]

BLAST of Cp4.1LG11g03520.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD40_CUCSA	1.4e-62	77.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363560 PE=4 SV=1	[more]
F8WL84_CITUN	1.2e-32	52.05	WRKY DNA-binding protein OS=Citrus unshiu GN=ORF17 PE=4 SV=1	[more]
A0A067GDY4_CITSI	1.2e-32	52.05	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031482mg PE=4 SV=1	[more]
V4UPS5_9ROSI	1.2e-32	52.05	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009761mg PE=4 SV=1	[more]
A0A059CLX9_EUCGR	9.7e-32	51.77	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00675 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g03520.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26170.1	1.1e-29	86.15	WRKY DNA-binding protein 50	[more]
AT5G64810.1	1.6e-25	78.46	WRKY DNA-binding protein 51	[more]
AT4G26640.2	4.8e-22	64.06	WRKY family transcription factor family protein	[more]
AT5G07100.1	1.2e-20	59.70	WRKY DNA-binding protein 26	[more]
AT5G49520.1	1.2e-20	65.08	WRKY DNA-binding protein 48	[more]

BLAST of Cp4.1LG11g03520.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453049\|ref\|XP_004144271.1\|	2.0e-62	77.12	PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis sativus]	[more]
gi\|659089459\|ref\|XP_008445519.1\|	9.9e-62	76.47	PREDICTED: probable WRKY transcription factor 50 [Cucumis melo]	[more]
gi\|778715287\|ref\|XP_011657375.1\|	1.8e-47	75.40	PREDICTED: probable WRKY transcription factor 50 isoform X2 [Cucumis sativus]	[more]
gi\|645227462\|ref\|XP_008220528.1\|	5.1e-34	52.03	PREDICTED: probable WRKY transcription factor 50 isoform X2 [Prunus mume]	[more]
gi\|1009134425\|ref\|XP_015884439.1\|	5.1e-34	54.11	PREDICTED: probable WRKY transcription factor 50 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG11g03520	Cp4.1LG11g03520	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g03520.1:cds:001	Cp4.1LG11g03520.1:cds:001	CDS
Cp4.1LG11g03520.1:cds:002	Cp4.1LG11g03520.1:cds:002	CDS
Cp4.1LG11g03520.1:cds:003	Cp4.1LG11g03520.1:cds:003	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g03520.1	Cp4.1LG11g03520.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 68..132 score: 4.8
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 75..132 score: 3.5
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 74..133 score: 4.3
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 69..134 score: 30
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 70..132 score: 5.36
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 69..133 score: 1.2
None	No IPR available	PANTHER	PTHR31221:SF28	SUBFAMILY NOT NAMED	coord: 69..133 score: 1.2