Cp4.1LG09g09830.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATGATAACGACCGTCGACCGTGCTTTAGTTCTAAGCAGCGTGTCGCCCTTTTGCTTTGGACTTTCAAAATCTCTGCTTTAGGGTTCTCTTTAGGAAATCATCCGTTAAGAGANAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTCAGAGCAGAGAAGAGCATCAATGGCGGGCAATTCGGCAGTGGCCTTGGAAGATGTGCCCTCCGTGGATCTCATGACGGAGCTTCTCCGTCGTATGAAATGCTCCTCGAAGCCTGACAAGCGCCTCATTCTCATCGGTAATTTTCTAGGTTTTTATGCTTTTAAACTTCGATTTCTGGCTTTATGGTTGGTTTTCGTGTGTCGGTTTGTGGTAATTTCGTGGAGTTGAGGCGTTGGATTGATGCAAATGGCTCAGGAGTTTTGCATCTGTGAATCTTATGTCCTGTTTTTCGCTCTTTCAAATTGCTTGGGTTTTGAGTCAAAATCTGGATTTCTACTCTTTTTTCAAGTGATTTTTACCTTGGATGATGGATTTAGGTTCGAGTAAAAGGTTAAGGGATTTAAGTTCTATGAAGATCTAGATGAAAAAGGAACTTATCTTCGTTGTTGTTCAGTAACGTATTATTTTTGTCGGATGGAAAATTACTAGTGTTTATCCTTTTAATTTCTTATTGTTTTCAGTATGTAATCACGAACTTTTAGGGGGAAACACAGAGTAAATCAACTAAAAGAGTTTATGAGCTGCTGCTACACATGGTTCAAGTTAATATCTATTTGCACATTGTAAAACACTTAAGAGTAATGCATAATGGTTTGTAAAGCTTTAAGAATAATGGATATAACTTGGCTGCCATGTTCGTTTCCTACTTCTAATCACATTTATTGGAAATCTGTGTGATAGACCTCAAATTGCTGAAGTGTATGAAGGTAAGCGTGTGAAGAGAGGGGGGAGCCGTGTGCGAGGCGAGGACTTGTTTTTGTTGCGTGAAGGGCCTCGGAGGGAAGAGATGTAGGGGTGGGGGTTTGGGGACCGGGGAGAGGATCTTTTTGGCCTGAGTTTCTGTAACTCTCGAACTGAGAGTTTCAGGACAGATGGGAAGATCTCGATGCTGTTGATAAAGAAAAATTGTGTCTGATGCCTAGCACTATGCTAAGGACTGAAAATGATAAAGGAATCGAGGAGAAAAACTGAAGCCGAAAGGGATTATTGAGACTTAAGGTGTTTTTGCATTGAGACACTCATGTTTCCAAAGGCATCTAATAGTGTAAAAGAATTTAGAAGGGAAAGGGAAACTAATATGGCGAGGGTTATGGATCGAGTTGTATGCTACTTTTAAAAGAGTAGAAGGCAGCTAGTGGGAAAAGATTCTAGTTTCTTTGTATGTAGCTTGACCTCGTGTCGTTCGGTTTGGGTTTTCATTGCATTGTATGGTATGTTGTGGTGATTTGAATCATAACCATGAAACTCCGATGTGTTGCAGGTCCACCCGGATCAGGTAAAGGGACCCAATCACCAATCATCAAGGATGACTACTGCTTGTGTCATTTGGCTACTGGTGATATGTTAAGAGCTGCTGTTGCTGCTAAAACTCCTCTTGGTGTCAAGGCTAAAGAGGCTATGGATAAGGTCGAGTTTCCCTTATGCTTTCTGCTCTTTGTTTCTTTTCCATGCTTCATTCTAATCTCATCTTTGTTATCTCGTTAAAGGTTTTAATTGTTCTATATTGTAGGGTGAACTCGTGTCTGATGACTTGGTTGTTGGCATCATCGATGAAGCGATGAAGAAACCTTCTTGTCAGAAAGGCTTCATTCTTGATGGGTTTCCAAGAACCGTAGTTCAAGCACAAAAGGTGCGAGATTCATTGAAATTTAATGTATATGTTCGAATTTCTTCGCTATTTGCGAGTATTATACTTTTTAGTTACTCCATTGCAGCTTGATGAGGTGCTTGACAAGCAAGGAGTGAAAGTTGATAAGGTGCTCAACTTTGCTATTGATGATGCTATTTTGGAGGAGAGGATCACCGGGCGATGGATACACCCATCCAGTGGCAGAAGTTACCACACCAAATTTGCTCCTCCAAAGACTCCTGGTGTTGACGATGTAAGAAACTTCCTAACGTTACTTTAACTAGAGGTGTGAGATCCCATATTGGTTGGAGAGGGAAACGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAACCGTGAGGCTGACGGTGATACGTAATGGGCTAAAGCGAACAATGTTTGCTAGCGATGGGCTTGGTCAGAGCCGACGCTGGACTCCCAAGGGGGGTGGATTGTGAGATTCTACATCAGTTGGAGAGAGGAATGAAGCATTCTTTATAAGGGTGTGGAACCTCTCACTAACAGACGCGTTTTTAAACTGTGAGACTGACGGCGATACGTAACGAGCCAGAGCGGACAGTATCTGCTAGCCGTGGGCTTGGGCTGTTACAAGAAATCAGCTAGAAGTGGATATAACTTGGACTACAAATCAAATAGAAGTTGATATTTGACCCATCTATGTATATACGTTTTGATGAGCTGCAGCAAATATTCTTAACCGTCTTGTTTTCTTTACAAGGTAACTGGAGAGCCTTTGATTCAACGGAAAGATGATACTGCCGCTGTATTAAAGTCACGTCTGGAGGCATTTCACAAACAAACCATGCCGGTACAGTTGCTTTGTGTTTTTCTTTTGATCTGATCGATTAGGAATGTTGAAAAGGTGTCTTCGTTTTCCTTACATGACTAACTGTTGATTTGATCGGTTTGTGGTCAATAAGGGTCTTGTAAAAATTAAAGGGCCTAGAGGAAATAAATTCTAAGTCAATGGTGGCCACTTACCCAAGTTTTAATATTGTGAGATCCCACCTCGGTTAGATAGGGGAACGAAACATTCTTTATAATGGAGTGGAAACCTCTCCCTAAAAGACGCGTTTTAAAACCTTGAGGGGAAGCCTGAAAGGGTCCAAAAAGGACAATATCTGCTAGCGATGGGCTTGGGTTGTTACAAATGGTATCAGAGCTAAACACCGGGGGGTGTGCCAGCGGGGACACTGGGTCCCCAAGGGTGTGAAAACCTCTTCTTAGCAGACACGTTTTAAAACCTTGAGGGGGCCCGAAAGGGAAAACCCAAAGATGACAATATCTACTAGTGATGGGTTTGGGCTGTTATAAATGGTATCAGAGCCAGACACCGAGTGGTGTGCCAGCGAGGACGTTGGGCCTCCAAAGAAGGTAGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACTAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACATTTTAAAACCTTAAGGGGGCACGAAAGGGAAAACCCAAAGATGACAATATCTACTAGCGATGGATTTGGGCTGTTACAAATGGTATAAGAGCTAGACACCGGACAATGTGCCAGTGAGGACGCTGGCCCCCAAGGAAGTGGATTTTGAGATCCCACATCGGTTGAAGAGGGGAACGAAGCATTCCTTGTAAGGGTGGGGAAACCTCTCCCTAGCAGACGTGTTTTAAAACTTTGAGGGGAAGCCCAAAAGGGAAAGTCCAAAGAGGACAATATCTACTAGCGGTGGGATTGGGCTGTTACAAATATACTTTGAGATATCTTGGCAATCAAATGTAGGTAGGTCGGGGTTTGCATTTATGTTTCTAAATGTTCTGGCTTGCAGGTGATCGATTATTATGCGAAAAAGGGTCTTGTCGCAAATCTGCACGCTGAGAAGCCTCCAAAAGAAGTCACAGCTGAGGTTCAGAAAGTGCTCTCATAGAATGATAGGAGTTTCTGAGGCCCCGGTCACTACTTTTACTACTTTCTACTCCTTTTACTGTTGAATTGTCTGAAAATCTTTCTCATTTGTTCTTCAATTTTCGAACATCCATTTTCCGGCTGCTATTATCGAACTTTTTGAGCGCTGAACGAGTCGAGAATCATTAGAAATAAAACGTTTGATCTTCTGATGAAATGATTGAGTTTGATCTTAGAAATCTGCCTTACTGAAATATTTCTTTGTTTCATTTTCTGATGAAATGATTGA GATGATAACGACCGTCGACCGTGCTTTAGTTCTAAGCAGCGTGTCGCCCTTTTGCTTTGGACTTTCAAAATCTCTGCTTTAGGGTTCTCTTTAGGAAATCATCCGTTAAGAGANAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTCAGAGCAGAGAAGAGCATCAATGGCGGGCAATTCGGCAGTGGCCTTGGAAGATGTGCCCTCCGTGGATCTCATGACGGAGCTTCTCCGTCGTATGAAATGCTCCTCGAAGCCTGACAAGCGCCTCATTCTCATCGGTCCACCCGGATCAGGTAAAGGGACCCAATCACCAATCATCAAGGATGACTACTGCTTGTGTCATTTGGCTACTGGTGATATGTTAAGAGCTGCTGTTGCTGCTAAAACTCCTCTTGGTGTCAAGGCTAAAGAGGCTATGGATAAGGGTGAACTCGTGTCTGATGACTTGGTTGTTGGCATCATCGATGAAGCGATGAAGAAACCTTCTTGTCAGAAAGGCTTCATTCTTGATGGGTTTCCAAGAACCGTAGTTCAAGCACAAAAGCTTGATGAGGTGCTTGACAAGCAAGGAGTGAAAGTTGATAAGGTGCTCAACTTTGCTATTGATGATGCTATTTTGGAGGAGAGGATCACCGGGCGATGGATACACCCATCCAGTGGCAGAAAGCCTTTGATTCAACGGAAAGATGATACTGCCGCTGTATTAAAGTCACGTCTGGAGGCATTTCACAAACAAACCATGCCGGTGATCGATTATTATGCGAAAAAGGGTCTTGTCGCAAATCTGCACGCTGAGAAGCCTCCAAAAGAAGTCACAGCTGAGGTTCAGAAAGTGCTCTCATAGAATGATAGGAGTTTCTGAGGCCCCGGTCACTACTTTTACTACTTTCTACTCCTTTTACTGTTGAATTGTCTGAAAATCTTTCTCATTTGTTCTTCAATTTTCGAACATCCATTTTCCGGCTGCTATTATCGAACTTTTTGAGCGCTGAACGAGTCGAGAATCATTAGAAATAAAACGTTTGATCTTCTGATGAAATGATTGAGTTTGATCTTAGAAATCTGCCTTACTGAAATATTTCTTTGTTTCATTTTCTGATGAAATGATTGA ATGGCGGGCAATTCGGCAGTGGCCTTGGAAGATGTGCCCTCCGTGGATCTCATGACGGAGCTTCTCCGTCGTATGAAATGCTCCTCGAAGCCTGACAAGCGCCTCATTCTCATCGGTCCACCCGGATCAGGTAAAGGGACCCAATCACCAATCATCAAGGATGACTACTGCTTGTGTCATTTGGCTACTGGTGATATGTTAAGAGCTGCTGTTGCTGCTAAAACTCCTCTTGGTGTCAAGGCTAAAGAGGCTATGGATAAGGGTGAACTCGTGTCTGATGACTTGGTTGTTGGCATCATCGATGAAGCGATGAAGAAACCTTCTTGTCAGAAAGGCTTCATTCTTGATGGGTTTCCAAGAACCGTAGTTCAAGCACAAAAGCTTGATGAGGTGCTTGACAAGCAAGGAGTGAAAGTTGATAAGGTGCTCAACTTTGCTATTGATGATGCTATTTTGGAGGAGAGGATCACCGGGCGATGGATACACCCATCCAGTGGCAGAAAGCCTTTGATTCAACGGAAAGATGATACTGCCGCTGTATTAAAGTCACGTCTGGAGGCATTTCACAAACAAACCATGCCGGTGATCGATTATTATGCGAAAAAGGGTCTTGTCGCAAATCTGCACGCTGAGAAGCCTCCAAAAGAAGTCACAGCTGAGGTTCAGAAAGTGCTCTCATAG MAGNSAVALEDVPSVDLMTELLRRMKCSSKPDKRLILIGPPGSGKGTQSPIIKDDYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEVLDKQGVKVDKVLNFAIDDAILEERITGRWIHPSSGRKPLIQRKDDTAAVLKSRLEAFHKQTMPVIDYYAKKGLVANLHAEKPPKEVTAEVQKVLS
BLAST of Cp4.1LG09g09830.1 vs. Swiss-Prot
Match: KAD4_ORYSJ (Adenylate kinase 4 OS=Oryza sativa subsp. japonica GN=ADK-B PE=2 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 5.1e-111 Identity = 205/241 (85.06%), Postives = 215/241 (89.21%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. Swiss-Prot
Match: KAD3_ORYSJ (Adenylate kinase 3 OS=Oryza sativa subsp. japonica GN=ADK-A PE=2 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 9.1e-108 Identity = 198/240 (82.50%), Postives = 210/240 (87.50%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. Swiss-Prot
Match: KAD4_ARATH (Adenylate kinase 4 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=2) HSP 1 Score: 362.5 bits (929), Expect = 3.5e-99 Identity = 180/243 (74.07%), Postives = 203/243 (83.54%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. Swiss-Prot
Match: KAD3_ARATH (Adenylate kinase 3 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 5.5e-97 Identity = 178/247 (72.06%), Postives = 208/247 (84.21%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. Swiss-Prot
Match: KAD2_DICDI (Adenylate kinase OS=Dictyostelium discoideum GN=adkA PE=3 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.1e-57 Identity = 109/210 (51.90%), Postives = 147/210 (70.00%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TrEMBL
Match: A0A0A0LR54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050340 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 1.5e-112 Identity = 215/246 (87.40%), Postives = 222/246 (90.24%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TrEMBL
Match: C6TBP8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G046100 PE=2 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 1.8e-110 Identity = 208/237 (87.76%), Postives = 215/237 (90.72%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TrEMBL
Match: A0A0S3R659_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G392800 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 3.0e-110 Identity = 206/237 (86.92%), Postives = 215/237 (90.72%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TrEMBL
Match: A0A067KGH5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11320 PE=3 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 5.2e-110 Identity = 208/245 (84.90%), Postives = 218/245 (88.98%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TrEMBL
Match: A0A0B2RQ63_GLYSO (Adenylate kinase B OS=Glycine soja GN=glysoja_016729 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 6.7e-110 Identity = 207/237 (87.34%), Postives = 215/237 (90.72%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TAIR10
Match: AT5G63400.1 (AT5G63400.1 adenylate kinase 1) HSP 1 Score: 362.5 bits (929), Expect = 1.9e-100 Identity = 180/243 (74.07%), Postives = 203/243 (83.54%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TAIR10
Match: AT5G50370.1 (AT5G50370.1 Adenylate kinase family protein) HSP 1 Score: 355.1 bits (910), Expect = 3.1e-98 Identity = 178/247 (72.06%), Postives = 208/247 (84.21%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TAIR10
Match: AT5G35170.1 (AT5G35170.1 adenylate kinase family protein) HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28 Identity = 72/219 (32.88%), Postives = 122/219 (55.71%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TAIR10
Match: AT5G47840.1 (AT5G47840.1 adenosine monophosphate kinase) HSP 1 Score: 109.0 bits (271), Expect = 3.9e-24 Identity = 69/209 (33.01%), Postives = 110/209 (52.63%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. TAIR10
Match: AT2G37250.1 (AT2G37250.1 adenosine kinase) HSP 1 Score: 103.2 bits (256), Expect = 2.1e-22 Identity = 60/200 (30.00%), Postives = 103/200 (51.50%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. NCBI nr
Match: gi|449469623|ref|XP_004152518.1| (PREDICTED: adenylate kinase 4 [Cucumis sativus]) HSP 1 Score: 413.7 bits (1062), Expect = 2.1e-112 Identity = 215/246 (87.40%), Postives = 222/246 (90.24%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. NCBI nr
Match: gi|356513991|ref|XP_003525691.1| (PREDICTED: adenylate kinase 4 [Glycine max]) HSP 1 Score: 406.8 bits (1044), Expect = 2.5e-110 Identity = 208/237 (87.76%), Postives = 215/237 (90.72%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. NCBI nr
Match: gi|965659562|dbj|BAT75981.1| (hypothetical protein VIGAN_01392800 [Vigna angularis var. angularis]) HSP 1 Score: 406.0 bits (1042), Expect = 4.3e-110 Identity = 206/237 (86.92%), Postives = 215/237 (90.72%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. NCBI nr
Match: gi|802647830|ref|XP_012079870.1| (PREDICTED: adenylate kinase 4 [Jatropha curcas]) HSP 1 Score: 405.2 bits (1040), Expect = 7.4e-110 Identity = 208/245 (84.90%), Postives = 218/245 (88.98%), Query Frame = 1
BLAST of Cp4.1LG09g09830.1 vs. NCBI nr
Match: gi|734407595|gb|KHN34401.1| (Adenylate kinase B [Glycine soja]) HSP 1 Score: 404.8 bits (1039), Expect = 9.7e-110 Identity = 207/237 (87.34%), Postives = 215/237 (90.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
|