Cp4.1LG08g08810.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAAGCTGAGGCGGGAACACAATTCGTTCGGGTTTTATTTCTGTATTTGTTTTGCAATCGCATCACTCTCAGAATTCAATCGAGAAGATGGGTCGAAACAGAATGTACTGGGATGATTCCATGCCTGTCAAGGTCATGGATGAATCTATGACGAAGTATAAGGTTATCTCTCTCTCTTTCCATCTGTTAATTCTCTCTTTGCAGTATCCAAGAAGTGCTGTTGTAATCTGTCAATCTGAGATTGTGTTGATTTTGTCTTCGTTTGTTGCTTCGTGGCTTTGATACGAACAAATGCTGGCGTTTTTCAGATAATGCATGGACAAGAAGCCGTCTGTGTTCCGGCCGAGGGAGGAGTCTTTAACGGTTGCGGTAAGAACGATGAGCCGAAGAGGTCCGTAGTCTTTTCTTGTTTTTTTTTTGGTATCATCAATCATATCTCTGGAGGTTGAAATGTTATTGTAGTTATTTAAAATTCTTGGAAGTTTTGTGATCATGTTAACGGGCAATGTTCTTGTTTCTGTTTGATCCTGTGAGTTGAAATGAAAGTGAAGGCGTGGATATTAATATTTTTGGACCTTGGTTACATGTTTGTGAAATCTTTAAGTTTATGGCGTGGCTGCTAATTTTTGAGTCTTTAATGGTGGTCAGTGGACCAGTCTTGTTTACCTTCAAGAACTGGAAGTGACCTTGGAGAATGTTTTATTCAAGATGAAAGACCTTGCTACTTGTGAGATCCCACATTGGATGGGGAGGAGAATGAAACATTTTTTATAATAGTGTGTAAATCTCTCCCTAGTTAGTAGACACATTTTAAAAACCTTGAGAGAAAGCCCAAAAGGGAAAGTCCAAAAGGACAATATCTGTTAGTAGTGGGATTGAGTTGTTACGAATGGTATTAGAGTTAGACATTGGACGATATGCCAGCAAGGAGGTTGAGTCTCGAAGGAGGGTGGACACGAAGTAGTGTGCCAACGAGGACGTTGAACCCCGAAAGGGGTAGATTGTGAGATCCCACATCAGATGGGAAGGAGAACGAAACATTATTTATAAGAGTATGGAAACTTCTCCCTAGTAGATGCGTTTTAAAAACCTTGAGGGCAAACCCGAAAGAGAAAGCCCAAATAGGACAATATTTGCTAGTGGTGGGCTTGAACTCTTACATTACTAAAGTCAAGCTGGCCGATGAAAATGGTCATAACATACTATTTTGGGAGGAGACATGGAATGGAAATGAAGCTAATTTTCTATGTTCAGATCTACATTTTGGCAGGTTGCAAACGCCATCGTACTAGTCGGATTTAGAAAGCTGATTCTGCCTCTTAGAACTATCTTTTATACAAAACTTGAATGGGTATTATGGTATAAATAGATCTGGCATGAGAATTCTTGAGTTTTAGCAGCAAACCTCTCCTAAAAGACTATCATCTTTGCAAGTATGTTTAAAAGGCGAAAAATCTTCATTTGGGAAGTCTAGTTGGGAATCTTTTTTCCCCATCGGGAATCCTTGATCTTGCCTCTTTCTGTTGAGGATTTTTGCAGTGATGAAGGTGGGGACGACTTCCTAATCCCACCTATATTCTTGATACCCGACTTTCTAACTTCTACCCCAAGCTACTTATGGAGAATGCATAACTTTAAAGTTACAAGTCTTGTGGGCTACCAAGCTACTCTACCCCAGTGGACAGATTTCCCATCACCAAGAAAAACCGCACGCCATAAAGTTGAATGACACTTGAATGACACTTGAATGACAGTCTTTTGATTTGATGCCTTGTCATATATGCTATATGGAGTTATTTTGACTGGTCTCAACTAACACTAGATTTTGGATCCTAGGGAAGTTAGGGTCTTTGCAACCATATAAACATTGTAGAAGAAGAAATGTTCTTTAATGCACTACCTCTTGGCCTCCAAGATATGGGGAAGGCACTTAAAGGCGTGCTAGGTTTAGGTTGGATATTCTGGAGGTGCGAGAAAGATTCAGCGGTGCAATTGCTTTTAGAATGTAGAAAAAACAAGAACATTTGAAAAGTTATTAGAACGGTTTCTGTGGCTGCTGTTACCTACAAAGTTTACTTTAGAGAATACTTTGAGAGAAAAGAAGTGATTTCGTAGAGGTTCAGGGTAGAATGATCATTGTTACTTTCCATTTCAACGTCCTTCTGGTCTGCAATTATGGAAGAGTACTATAAAATTTGGGTTTTTTTTTTTGGTCAAAGACAAGCTAGAGGGCTCTATATCACTCTCCCTAGGTCTTACTGTGGGGTCTCATGTAACAGTCCAAGTCCACTGCTAGTAGATATTGTTCTCTTGGGGCTTTCTCTTTCGGGCATCCCCTCAAGGTTTTTAAAATGCATTTTTTTTATCTACTAGATGTGGATTTGTGTTGTTACAAATGGTATTAGAGCCAGACATCGAGTGATGTGCCAACGAGGAGACTGAGCCTTGAAGGGGGGTGGACACGAAGCAGTGTACCAGCAAGGAGGCTAAGTTTTGAAGGGGGTGAACACGAGGCGGTATGCCAGCAAGGGTGTTGGGCCCCACTTTAGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAAGGTGTGGAAACTTCCCATTTATTTATTTGCTTACGGTGAACTTGGGCCGTTACATTTGGTCTTTAGACCTTGTTCTCTTATTTTTTTTGTGTTATTGTATCTCATTCTTATCAAAGAAGAGAAGGGAGATAGATAGGAAGAAGTGCCATGGCTAAGCCCCTTCTTGTTTTGTAGGATATATTGCAACTTCTCTTCAATAATCTCCACTAGGGAAAATACAGGAAAAATAACATATAGTTATTCCGCTTAATATTTTATTACTCTCTTAATTTTTGTTCATCTTCAAAGAACAGGTGTGTAAATGAAGAGGGCAACGTCGAGTTTGAAGTTAATGGAATTAGAAATGCCTCGGAAGCTAATGAAAATAGCACTGTAGAGCCGCAACAGGGACCCATTGAGCACTTCAATTTAGATCTGAAAGGTGAAGAGCGCTATAACCAGCTACTCAATCAGTATTACGAGCTCGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTGTATCAATCCGGTGCTGGTGGTTGGAACTACCAGGATGTCAGCGCAGGGTCGGAGTTTGGAACATCTTCTGCTTATCAAGAGCTCCCAGCCTCTGCAAGCCAACCTTCTCAAAACCATCCAATACCCTCCTATTTTCCCTCCAGTTTTCCAATTCAAGCTGGTATGGATTGCTTGTTGTATGGATTGTTTGTTGTTGGCAAGTGGCAAAGTGTTACCCATTTTTCATTCATTGGTCTCAGGTCCTGAAAGTTTGTCCTTCGCTGATGATGACATTATCAAAACTGCAATGGATTCTGCAGAAAGAGCTATATCCTCCGTGAAGACTGTAAAAAAAGGTAGGCATGATTATTTCGAGTCGTATCTTTTTAGATTATCTGTTCGTTGTGTCGTATTGAGTTAACGATTATCCGACGAGCATGAACCAAACCACTTCAGTAGTTTCAACATGATCTTGCATATTTCAGTTGTGCATACATTTTAAATAGCTTTAGATAAGAATCATAAGATTATATGCGTTTGATCTGTTGACATAGAGAAAGAGAGCGAGAAACATGATGATGGGGTAATGGCGCAAAGTGGTCCAGTTGTATACTCTGAAACAGACCTTTCTGCTGTTTTTCATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAGTACGTTTTGCTTGAAAACGTTCTTTTAGACACTTAAAAAGTCGTTCCAAATAGGCCCTTTAAAAAGATCGAGTCTAATCAAGTGTGTAATAATCTCGATCTGTTTTGCAGATACCTTGTGGAGCAATCTCATCCAAAGAAACTGTGAAAAAACAAGCTTCCTCCTACAACTCTATAATCTTTTCACTCAACTTTGCTTGTACAGAACAAACCCAACTCTGATCTATAAATGAGTTTCAATTTTCCACTATTTTCGTTTTCTGTTGATTTTGTGACATTTTAGCGCCCTTAGACGTCTTATAGTTATAGCGAACGTCTCATTCGATAACCTATTGAGCTTTTAACTTTTGGTTTTTACAATTGTGGTTGTTTTTTTACAATAGAGATGTCCATGGCGTGGGGATAGGAAGTCTTTTCCATCCTCATCCCGACCCCATTCTTCATTTTTTTATTATTGCAAAAATTTTCATTTATTTTTATAGGGATCGGGGCAAATACACAA GCAAGCTGAGGCGGGAACACAATTCGTTCGGGTTTTATTTCTGTATTTGTTTTGCAATCGCATCACTCTCAGAATTCAATCGAGAAGATGGGTCGAAACAGAATGTACTGGGATGATTCCATGCCTGTCAAGGTCATGGATGAATCTATGACGAAGTATAAGATAATGCATGGACAAGAAGCCGTCTGTGTTCCGGCCGAGGGAGGAGTCTTTAACGGTTGCGGTAAGAACGATGAGCCGAAGAGGTGTGTAAATGAAGAGGGCAACGTCGAGTTTGAAGTTAATGGAATTAGAAATGCCTCGGAAGCTAATGAAAATAGCACTGTAGAGCCGCAACAGGGACCCATTGAGCACTTCAATTTAGATCTGAAAGGTGAAGAGCGCTATAACCAGCTACTCAATCAGTATTACGAGCTCGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTGTATCAATCCGGTGCTGGTGGTTGGAACTACCAGGATGTCAGCGCAGGGTCGGAGTTTGGAACATCTTCTGCTTATCAAGAGCTCCCAGCCTCTGCAAGCCAACCTTCTCAAAACCATCCAATACCCTCCTATTTTCCCTCCAGTTTTCCAATTCAAGCTGGTCCTGAAAGTTTGTCCTTCGCTGATGATGACATTATCAAAACTGCAATGGATTCTGCAGAAAGAGCTATATCCTCCGTGAAGACTGTAAAAAAAGAGAAAGAGAGCGAGAAACATGATGATGGGGTAATGGCGCAAAGTGGTCCAGTTGTATACTCTGAAACAGACCTTTCTGCTGTTTTTCATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCATCCAAAGAAACTGTGAAAAAACAAGCTTCCTCCTACAACTCTATAATCTTTTCACTCAACTTTGCTTGTACAGAACAAACCCAACTCTGATCTATAAATGAGTTTCAATTTTCCACTATTTTCGTTTTCTGTTGATTTTGTGACATTTTAGCGCCCTTAGACGTCTTATAGTTATAGCGAACGTCTCATTCGATAACCTATTGAGCTTTTAACTTTTGGTTTTTACAATTGTGGTTGTTTTTTTACAATAGAGATGTCCATGGCGTGGGGATAGGAAGTCTTTTCCATCCTCATCCCGACCCCATTCTTCATTTTTTTATTATTGCAAAAATTTTCATTTATTTTTATAGGGATCGGGGCAAATACACAA ATGGGTCGAAACAGAATGTACTGGGATGATTCCATGCCTGTCAAGGTCATGGATGAATCTATGACGAAGTATAAGATAATGCATGGACAAGAAGCCGTCTGTGTTCCGGCCGAGGGAGGAGTCTTTAACGGTTGCGGTAAGAACGATGAGCCGAAGAGGTGTGTAAATGAAGAGGGCAACGTCGAGTTTGAAGTTAATGGAATTAGAAATGCCTCGGAAGCTAATGAAAATAGCACTGTAGAGCCGCAACAGGGACCCATTGAGCACTTCAATTTAGATCTGAAAGGTGAAGAGCGCTATAACCAGCTACTCAATCAGTATTACGAGCTCGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTGTATCAATCCGGTGCTGGTGGTTGGAACTACCAGGATGTCAGCGCAGGGTCGGAGTTTGGAACATCTTCTGCTTATCAAGAGCTCCCAGCCTCTGCAAGCCAACCTTCTCAAAACCATCCAATACCCTCCTATTTTCCCTCCAGTTTTCCAATTCAAGCTGGTCCTGAAAGTTTGTCCTTCGCTGATGATGACATTATCAAAACTGCAATGGATTCTGCAGAAAGAGCTATATCCTCCGTGAAGACTGTAAAAAAAGAGAAAGAGAGCGAGAAACATGATGATGGGGTAATGGCGCAAAGTGGTCCAGTTGTATACTCTGAAACAGACCTTTCTGCTGTTTTTCATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCATCCAAAGAAACTGTGA MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVPAEGGVFNGCGKNDEPKRCVNEEGNVEFEVNGIRNASEANENSTVEPQQGPIEHFNLDLKGEERYNQLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGSEFGTSSAYQELPASASQPSQNHPIPSYFPSSFPIQAGPESLSFADDDIIKTAMDSAERAISSVKTVKKEKESEKHDDGVMAQSGPVVYSETDLSAVFHAWYSAGFYTGKYLVEQSHPKKL
BLAST of Cp4.1LG08g08810.1 vs. TrEMBL
Match: A0A0A0L6D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008290 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 8.3e-72 Identity = 168/285 (58.95%), Postives = 198/285 (69.47%), Query Frame = 1
BLAST of Cp4.1LG08g08810.1 vs. TrEMBL
Match: V4V2B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001787mg PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27 Identity = 108/314 (34.39%), Postives = 148/314 (47.13%), Query Frame = 1
BLAST of Cp4.1LG08g08810.1 vs. TrEMBL
Match: A0A067E8X5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019321mg PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27 Identity = 108/314 (34.39%), Postives = 148/314 (47.13%), Query Frame = 1
BLAST of Cp4.1LG08g08810.1 vs. TrEMBL
Match: A0A0B0NST2_GOSAR (Survival motor neuron OS=Gossypium arboreum GN=F383_18755 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26 Identity = 109/317 (34.38%), Postives = 150/317 (47.32%), Query Frame = 1
BLAST of Cp4.1LG08g08810.1 vs. TrEMBL
Match: A0A0D2TAT5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G224100 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26 Identity = 110/314 (35.03%), Postives = 150/314 (47.77%), Query Frame = 1
BLAST of Cp4.1LG08g08810.1 vs. NCBI nr
Match: gi|659095546|ref|XP_008448638.1| (PREDICTED: uncharacterized protein LOC103490751 [Cucumis melo]) HSP 1 Score: 285.8 bits (730), Expect = 7.5e-74 Identity = 172/284 (60.56%), Postives = 197/284 (69.37%), Query Frame = 1
BLAST of Cp4.1LG08g08810.1 vs. NCBI nr
Match: gi|449465900|ref|XP_004150665.1| (PREDICTED: uncharacterized protein LOC101203762 [Cucumis sativus]) HSP 1 Score: 278.5 bits (711), Expect = 1.2e-71 Identity = 168/285 (58.95%), Postives = 198/285 (69.47%), Query Frame = 1
BLAST of Cp4.1LG08g08810.1 vs. NCBI nr
Match: gi|1009159279|ref|XP_015897726.1| (PREDICTED: uncharacterized protein LOC107431355 [Ziziphus jujuba]) HSP 1 Score: 143.7 bits (361), Expect = 4.6e-31 Identity = 121/315 (38.41%), Postives = 158/315 (50.16%), Query Frame = 1
BLAST of Cp4.1LG08g08810.1 vs. NCBI nr
Match: gi|743809358|ref|XP_011018489.1| (PREDICTED: uncharacterized protein LOC105121518 [Populus euphratica]) HSP 1 Score: 132.9 bits (333), Expect = 8.1e-28 Identity = 117/329 (35.56%), Postives = 157/329 (47.72%), Query Frame = 1
BLAST of Cp4.1LG08g08810.1 vs. NCBI nr
Match: gi|645265489|ref|XP_008238175.1| (PREDICTED: uncharacterized protein LOC103336837 isoform X2 [Prunus mume]) HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27 Identity = 116/312 (37.18%), Postives = 153/312 (49.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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