Cp4.1LG07g06310.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g06310.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Myb transcription factor family protein, putative
Location	Cp4.1LG07 : 3688407 .. 3690100 (+)
Sequence length	821

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGGAAATGTTCCCATTGTGGCAATGTGGGTCACAATTCAAGAACTTGCATCATTCAAAAAGAAAAGATTAGAGGTAAATTTAAGCTGTTTGGAGTTCATCTTGATGGAGTTTCATCTTCTTCGGTGGCGACGGTGGCGGGGGCGGCGGCGGCCGCCTTGTTGAAGAAGAGCATTAGCATGGAATGTTTGCCATCTTCTTCTTCTTCCTCTTCTTCTTGTGAGAAATTGTCAAATGGGTATCTCTCAGATGGGCTCATTACCAAAACCCATGAAAGAAAAAAGGGTATGTTCCCATTTGTTGTTTGAAAAGCTTAAAGCTGATAGATTACGGTATATTTCGTTCGTTCTTGTGTCGAAACCTTTTCGATCTTTTTCTATGGAAAATGATTATGTGATTGTGTTTGTGGTATTGTTAAGGTGTGCCATGGACGGAAGAAGAGCATAGAATGTTTCTTGTTGGGTTACAAAAGCTTGGAAAAGGAGATTGGAGAGGAATCTCGAGGAAATTTGTTACTACGAGAACTCCGACTCAAGTGGCTAGCCATGCACAAAAGTACTTTCTTCGACTCAATAGTCTCGACAAAAGAAAACACCGCCGCCCGAGCTTATTCGATGTAATTTCCCTTCAAAACTCTTCTTCATCTTTCAATCCAACTTTTTTTTTTTTTCATTCTTAGAAAAAGATTGAATTTTGAAGAATAACCCACTTTTTTAAGATAATGAATATTCATATATATATATATATATATATATATATATATCAATAAGTCCCAACAATCCAATTGTTGCCATTAGAAAATTATGAAGAATGTTATTAAAATAACCCTCTTGTGTTTGTTTACTTGAATTTCCATTTTCATTGACTCATTAAATGCATAAACTGCTGAAAGAGATGATATTATTAGTGCCTATCTATAATATATAATAATAAACTTATATGACATAATACTTTGAATTAAAAGTAATTTAGAGAAATAAAAAGGTCAAACTTTCTTCTTTAGATTTTTTTTTTTCTTGTTAATTTATTAAATATTAAATATTATGTTGGGTAAGTTTATCAGTATTTCGAGACTAAATTGAAATTTTTTAAACACCAAAGACCACGTATAATTAAACTTTTTCGTCGTGATCTATGAATGGCAGGTAGCTACAAGGGACAAATTCAGAGTCCAAGTGGTGAAGGGGAACAATTCCAAGCCAAGCAACCTGCCTCCATCCATTTCCTTTGGGATTCCATCAAATTCAACTCCAATTCATAATCATGTTCATCAAAGTTTATTGCCCATTTGGTTTGGTTATGAAGATCACAAGGCATTCAAATTCCTTGAGAACCCCATCAAATGTTCGAGCTCAAGCAGCCATTTTCATGGGAAACAGAAGACAAAGAGCCATCATCAAGCTCCTGATTTGCAGCTGAGTTTGTCCACTCCAAAGCCAGTAGAGCAAGCTGAGCAGCAGCAGCATTGCTGCAGAAATATACCCATTAATGGAGCCATTTCAGTGACGTGAGGACCAGCGCAACTAAACTAAGAAGCTGTCTTATTGAATATTGAAATTTTGTTTTTTGTTGTTNTAAGGATCGACTTGCTTTGCTTTTTGGGTGTAGGATGAAATATTAATTACTAGTAATTTGTAATTTTAAATGATACTAATGATCAATTTCAGTTGTAGCAAGCCTCTTCCTCACT

mRNA sequence

ATGGTGAGGAAATGTTCCCATTGTGGCAATGTGGGTCACAATTCAAGAACTTGCATCATTCAAAAAGAAAAGATTAGAGGTGTGCCATGGACGGAAGAAGAGCATAGAATGTTTCTTGTTGGGTTACAAAAGCTTGGAAAAGGAGATTGGAGAGGAATCTCGAGGAAATTTGTTACTACGAGAACTCCGACTCAAGTGGCTAGCCATGCACAAAAGTACTTTCTTCGACTCAATAGTCTCGACAAAAGAAAACACCGCCGCCCGAGCTTATTCGATGTAGCTACAAGGGACAAATTCAGAGTCCAAGTGGTGAAGGGGAACAATTCCAAGCCAAGCAACCTGCCTCCATCCATTTCCTTTGGGATTCCATCAAATTCAACTCCAATTCATAATCATGTTCATCAAAGTTTATTGCCCATTTGGTTTGGTTATGAAGATCACAAGGCATTCAAATTCCTTGAGAACCCCATCAAATGTTCGAGCTCAAGCAGCCATTTTCATGGGAAACAGAAGACAAAGAGCCATCATCAAGCTCCTGATTTGCAGCTGAGTTTGTCCACTCCAAAGCCAGTAGAGCAAGCTGAGCAGCAGCAGCATTGCTGCAGAAATATACCCATTAATGGAGCCATTTCAGTGACGTGAGGACCAGCGCAACTAAACTAAGAAGCTGTCTTATTGAATATTGAAATTTTGTTTTTTGTTGTTNTAAGGATCGACTTGCTTTGCTTTTTGGGTGTAGGATGAAATATTAATTACTAGTAATTTGTAATTTTAAATGATACTAATGATCAATTTCAGTTGTAGCAAGCCTCTTCCTCACT

Coding sequence (CDS)

ATGGTGAGGAAATGTTCCCATTGTGGCAATGTGGGTCACAATTCAAGAACTTGCATCATTCAAAAAGAAAAGATTAGAGGTGTGCCATGGACGGAAGAAGAGCATAGAATGTTTCTTGTTGGGTTACAAAAGCTTGGAAAAGGAGATTGGAGAGGAATCTCGAGGAAATTTGTTACTACGAGAACTCCGACTCAAGTGGCTAGCCATGCACAAAAGTACTTTCTTCGACTCAATAGTCTCGACAAAAGAAAACACCGCCGCCCGAGCTTATTCGATGTAGCTACAAGGGACAAATTCAGAGTCCAAGTGGTGAAGGGGAACAATTCCAAGCCAAGCAACCTGCCTCCATCCATTTCCTTTGGGATTCCATCAAATTCAACTCCAATTCATAATCATGTTCATCAAAGTTTATTGCCCATTTGGTTTGGTTATGAAGATCACAAGGCATTCAAATTCCTTGAGAACCCCATCAAATGTTCGAGCTCAAGCAGCCATTTTCATGGGAAACAGAAGACAAAGAGCCATCATCAAGCTCCTGATTTGCAGCTGAGTTTGTCCACTCCAAAGCCAGTAGAGCAAGCTGAGCAGCAGCAGCATTGCTGCAGAAATATACCCATTAATGGAGCCATTTCAGTGACGTGA

Protein sequence

MVRKCSHCGNVGHNSRTCIIQKEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSISFGIPSNSTPIHNHVHQSLLPIWFGYEDHKAFKFLENPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVEQAEQQQHCCRNIPINGAISVT

Homology

[Close]

BLAST of Cp4.1LG07g06310.1 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26
Identity = 79/202 (39.11%), Postives = 108/202 (53.47%), Query Frame = 1


Query: 22  KEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLD 81
           +E+ RGVPWTEEEH++FL+GLQK+GKGDWRGISR FV TRTPTQVASHAQKYFLR ++L+
Sbjct: 89  RERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLN 148

Query: 82  KRKHRRPSLFDVATRDKFRVQVVKGNNSK-------PSNLPPSISFGIPSNSTPIHNHVH 141
           +R+ RR SLFD+ T D   V  ++   +K       P+ LP +      +N+ P+   V 
Sbjct: 149 RRR-RRSSLFDITT-DSVSVMPIEEVENKQEIPVVAPATLPTT-----KTNAFPVAPTVG 208

Query: 142 QSLLPIWFG---------YEDHKAFKFLENPIKCSSSSSHFHGKQKTKSHH---QAPDLQ 201
             + P+              DH     L  P+   S  +         +H+   +   L 
Sbjct: 209 PIIFPVQIDKSREYPTLLRHDHGNSSMLVGPVPMFSMPNPSTAIDLNANHNSTIEPSSLS 268

Query: 202 LSLSTPKPVEQAEQQQHCCRNI 205
           L LS      QA   +H   N+
Sbjct: 269 LRLSLSLDQGQASSTRHSAYNV 283

[Close]

BLAST of Cp4.1LG07g06310.1 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25
Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 1


Query: 21  QKEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSL 80
           ++E+ +GVPWTEEEH++FL+GL+K GKGDWR ISR FV TRTPTQVASHAQKYF+R  S 
Sbjct: 125 EQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSG 184

Query: 81  DKRKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSISFGIPSNSTPIHNHVHQ----- 140
            K K RR S+ D+ T +    Q    +N KP + P        ++ST IH    Q     
Sbjct: 185 GKDK-RRASIHDITTVNLSDNQTPSPDNKKPPSSPDHSMAQQQTSSTSIHKLPFQWDQTS 244

Query: 141 SLLPIWFGYEDHKAFKFLENPIKCSSSSSHFHGKQ 171
           +   + F    H    F  NP   +S      G+Q
Sbjct: 245 NETIMGFASSGHHGNMFQSNPFGMNSYGFKMQGQQ 278

[Close]

BLAST of Cp4.1LG07g06310.1 vs. Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 1


Query: 30  WTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPS 89
           WT+EEH  FL G+Q  GKG W+ I++ FV TRTPTQ+ SHAQKY+LR     K K    S
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR---S 438

Query: 90  LFDVATRDKFRVQVVKGNNSKPSNL 115
           + D++ +D     +   NNS  +N+
Sbjct: 439 IHDLSLQDLIDDNL---NNSNKNNV 456

[Close]

BLAST of Cp4.1LG07g06310.1 vs. Swiss-Prot
Match: MYBI_DICDI (Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 1


Query: 30  WTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRK 85
           WT EEH  F+  L K G  D + IS+ +V+TR PTQV +HAQKYFLR++    RK
Sbjct: 175 WTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRIDRERGRK 228

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TrEMBL
Match: A0A0A0LKT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351740 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-42
Identity = 109/199 (54.77%), Postives = 132/199 (66.33%), Query Frame = 1


Query: 23  EKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDK 82
           E+ +GVPW+EEEH++FL+GL+KLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRL +L+K
Sbjct: 96  ERKKGVPWSEEEHKVFLIGLEKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLTTLNK 155

Query: 83  RKHRRPSLFD-VATRDKFRVQVVK---------GNNSKPS----NLPP----SISFGIPS 142
           RK RRPSLFD  A RDK  VQVV+          NN KP+    N+ P    +ISFG P+
Sbjct: 156 RKQRRPSLFDGAAARDKLTVQVVEKGSSSSSSINNNLKPTNNNYNIQPASSNNISFGNPT 215

Query: 143 NSTPIHNHVHQSLLPIWFGYEDHKA-FKFLENPIKCSSSSSHFHGKQKTKS-----HHQA 197
               I    + + +   +    H+  FKFL++PI  SSSS   +  Q T +     HH  
Sbjct: 216 PIPNISELTNLNWIEYHYNQRHHEPYFKFLQSPINKSSSSITINNFQTTTNHHHHRHHHQ 275

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TrEMBL
Match: A0A061GL43_THECC (Myb transcription factor family protein, putative OS=Theobroma cacao GN=TCM_037276 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-34
Identity = 95/195 (48.72%), Postives = 120/195 (61.54%), Query Frame = 1


Query: 22  KEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLD 81
           +EK +GVPWTEEEHR+FLVGL+KLGKGDWRGISR FVTTRTPTQVASHAQKYFLR NSL+
Sbjct: 93  QEKKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRKNSLN 152

Query: 82  KRKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSI---SFGIPSNSTPIHNHVHQSLL 141
           KR+ RR SLFDV + +KF  Q        P NLP  +   +  +P N     N V  +  
Sbjct: 153 KRR-RRTSLFDVGS-EKFANQKFHSRPPDPFNLPEFLLKKTSVVPINLNAATNPVQGNSG 212

Query: 142 PIWFGYEDHKAFKFLENPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVEQAEQQQ 201
            + F + +      ++      SSS          S  +APDL+LSL+ PKP++Q+E   
Sbjct: 213 DLEFAFSNDVPPLRIKESFHIQSSS-----LTMATSKSEAPDLELSLAAPKPLDQSE--- 272

Query: 202 HCCRNIPINGAISVT 214
             C +  + G ISVT
Sbjct: 273 -ACSHGLLFGPISVT 276

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TrEMBL
Match: A0A068UJ77_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027018001 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-31
Identity = 86/181 (47.51%), Postives = 113/181 (62.43%), Query Frame = 1


Query: 22  KEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLD 81
           +EK +G+PWTEEEHR+FLVGL+KLG+GDWRGISR FVTTRTPTQVASHAQKYFLR NSL+
Sbjct: 101 QEKKKGMPWTEEEHRIFLVGLEKLGRGDWRGISRNFVTTRTPTQVASHAQKYFLRQNSLN 160

Query: 82  KRKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSISFG--IP-----------SNSTP 141
           ++ +RRPSLFD+  RDK  +Q V+   S       SIS G  +P           S+S+P
Sbjct: 161 RKINRRPSLFDMVERDKSALQSVRPIFSWSIEQECSISGGMLLPKISTASCMVNFSSSSP 220

Query: 142 IHNHVHQSLLPIWFGYEDHKAFKFLENPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTP 190
               +  S +P+  G  +     F    I  SSSS++        S    P+L+L+L+ P
Sbjct: 221 PEQDLKSSQVPVPVGVSESLEHSF----IPSSSSSTNPEHDHDQNSSSPPPNLELTLAVP 277

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TrEMBL
Match: B9RRT6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0797750 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-29
Identity = 85/193 (44.04%), Postives = 113/193 (58.55%), Query Frame = 1


Query: 21  QKEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSL 80
           Q+ + +GVPWT EEH++FL+GLQKLGKGDWRGISR FVTTRTPTQVASHAQKYFLR NS 
Sbjct: 104 QEIRKKGVPWTAEEHQIFLLGLQKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQNSF 163

Query: 81  DKRKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSISFGIPSNSTPIHNHVHQSLLPI 140
           +KRK RRPSLFD+ +      ++ + NN     L  + ++  P + +      H  +LP 
Sbjct: 164 NKRK-RRPSLFDMESSQSSISKLNERNNFCGLALKNTEAYS-PGSYSKNLGLTHHLILPT 223

Query: 141 WFGYEDHKAFKFLENPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVEQAEQQQHC 200
           W           L  P+  S  +S   G       H APDL+L L+ P  ++Q++     
Sbjct: 224 W-----------LNEPLISSRPTS--FGLTSRNVQHLAPDLELKLAAPASLDQSKS---- 277

Query: 201 CRNIPINGAISVT 214
           C +  + G I VT
Sbjct: 284 CSDDFLIGPIRVT 277

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TrEMBL
Match: V4UIJ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009011mg PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.5e-29
Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 1


Query: 22  KEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLD 81
           +++ +GVPWTEEEHR+FL+GL+KLG+GDWRGIS+ FVTTRTPTQVASHAQKYFLR  +L 
Sbjct: 115 QDRKKGVPWTEEEHRVFLMGLEKLGRGDWRGISKNFVTTRTPTQVASHAQKYFLRQKNLY 174

Query: 82  KRKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSISFGI--------PSNS-TPIHNH 141
           KRK RRPSLFD   RDKF  +V+    SKP    PS   G+        PSN      + 
Sbjct: 175 KRK-RRPSLFDQMGRDKFSNKVLHTCCSKPGE--PSNFCGLLLKSTKASPSNGICDSSSA 234

Query: 142 VHQSLLPIWFGYEDHKAFKFLENPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVE 201
           +  + LP  F    +++F F          ++ F+ K  T +    P+L+L+L+ P P+ 
Sbjct: 235 LAYNSLPKCF----NESFNF--------QPAASFNLKMLTAASASPPNLELTLAAPTPL- 294

Query: 202 QAEQQQHCCRNIPINGAISV 213
             +Q++ C R++ I  AISV
Sbjct: 295 --DQRKVCTRDLMIE-AISV 295

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TAIR10
Match: AT3G16350.1 (AT3G16350.1 Homeodomain-like superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 3.2e-28
Identity = 70/124 (56.45%), Postives = 84/124 (67.74%), Query Frame = 1


Query: 13  HNSRTCIIQKEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQK 72
           H S +   + E+ RGVPWTEEEHR+FLVGLQKLGKGDWRGISR +VT+RTPTQVASHAQK
Sbjct: 122 HGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQK 181

Query: 73  YFLRLNSLDKRKHRRPSLFDVAT----RDKFRVQVVKG-NNSKPSNLPPSISFGIPSNST 132
           YF+R  S  +RK RR SLFD+ T     D    Q  +  N S PS  P   S+ +PS   
Sbjct: 182 YFIRHTSSSRRK-RRSSLFDMVTDEMVTDSSPTQEEQTLNGSSPSKEPEKKSY-LPSLEL 241

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TAIR10
Match: AT5G61620.1 (AT5G61620.1 myb-like transcription factor family protein)

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 1


Query: 23  EKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDK 82
           EK +G PWTEEEHR FL+GL KLGKGDWRGI++ FV+TRTPTQVASHAQKYF+RLN  DK
Sbjct: 103 EKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVNDK 162

Query: 83  RKHRRPSLFDVATRDK 99
           RK RR SLFD++  D+
Sbjct: 163 RK-RRASLFDISLEDQ 177

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TAIR10
Match: AT5G47390.1 (AT5G47390.1 myb-like transcription factor family protein)

HSP 1 Score: 117.9 bits (294), Expect = 7.9e-27
Identity = 54/72 (75.00%), Postives = 65/72 (90.28%), Query Frame = 1


Query: 22  KEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLD 81
           +E+ +G PWTEEEHRMFL+GLQKLGKGDWRGISR +VTTRTPTQVASHAQKYF+R +++ 
Sbjct: 90  RERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVS 149

Query: 82  KRKHRRPSLFDV 94
           +RK RR SLFD+
Sbjct: 150 RRK-RRSSLFDM 160

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TAIR10
Match: AT1G74840.1 (AT1G74840.1 Homeodomain-like superfamily protein)

HSP 1 Score: 114.4 bits (285), Expect = 8.7e-26
Identity = 57/102 (55.88%), Postives = 78/102 (76.47%), Query Frame = 1


Query: 23  EKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDK 82
           E+ RGVPWTEEEH++FL+GLQ++GKGDW+GISR FV TRT TQVASHAQKYFLR ++L++
Sbjct: 91  ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNR 150

Query: 83  RKHRRPSLFDVATRDKFRVQ-----VVKGNNSKPSNLPPSIS 120
           R+ RR SLFD+ T     ++     +++ N S+ S+  P I+
Sbjct: 151 RR-RRSSLFDMTTDTVIPMEEDHQVLIQENTSQSSSPVPEIN 191

[Close]

BLAST of Cp4.1LG07g06310.1 vs. TAIR10
Match: AT1G70000.1 (AT1G70000.1 myb-like transcription factor family protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1


Query: 22  KEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLD 81
           +E+ RG PWTEEEHR+FL GL K+GKGDWRGISR FV TRTPTQVASHAQKYFLR  + +
Sbjct: 92  RERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQN 151

Query: 82  KRKHRRPSLFDVATRDKF 100
           +R+ RR SLFD+ T D F
Sbjct: 152 RRR-RRSSLFDI-TPDSF 167

[Close]

BLAST of Cp4.1LG07g06310.1 vs. NCBI nr
Match: gi|659087473|ref|XP_008444471.1| (PREDICTED: myb-like protein I isoform X1 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 116/202 (57.43%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 23  EKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDK 82
           E+ +GVPW+EEEH++FLVGL+KLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRL +L+K
Sbjct: 104 ERKKGVPWSEEEHKVFLVGLEKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLTTLNK 163

Query: 83  RKHRRPSLFD--VATRDKFRVQVVK--------GNNSKP----SNLPP----SISFGIPS 142
           RK RRPSLFD   A RDK  VQVV+         NN KP    +N+ P    +ISFG   
Sbjct: 164 RKQRRPSLFDGSAAARDKLTVQVVEKGSSSSNTNNNLKPTNNNNNIQPASSNNISFG--- 223

Query: 143 NSTPIHNHVHQSLLPIWFGYEDHKA-----FKFLENPIKCSSSSSHFHGKQKTKS----H 197
           N TPI N    S L  WF Y  ++      FKFL++PI  SS+S   +  Q T +    H
Sbjct: 224 NPTPIQNISELSNLN-WFDYHYNQRHHEPYFKFLQSPINKSSNSIMINNFQTTTNHHHRH 283

[Close]

BLAST of Cp4.1LG07g06310.1 vs. NCBI nr
Match: gi|449450578|ref|XP_004143039.1| (PREDICTED: transcription factor MYB1R1-like [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42
Identity = 109/199 (54.77%), Postives = 132/199 (66.33%), Query Frame = 1


Query: 23  EKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDK 82
           E+ +GVPW+EEEH++FL+GL+KLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRL +L+K
Sbjct: 96  ERKKGVPWSEEEHKVFLIGLEKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLTTLNK 155

Query: 83  RKHRRPSLFD-VATRDKFRVQVVK---------GNNSKPS----NLPP----SISFGIPS 142
           RK RRPSLFD  A RDK  VQVV+          NN KP+    N+ P    +ISFG P+
Sbjct: 156 RKQRRPSLFDGAAARDKLTVQVVEKGSSSSSSINNNLKPTNNNYNIQPASSNNISFGNPT 215

Query: 143 NSTPIHNHVHQSLLPIWFGYEDHKA-FKFLENPIKCSSSSSHFHGKQKTKS-----HHQA 197
               I    + + +   +    H+  FKFL++PI  SSSS   +  Q T +     HH  
Sbjct: 216 PIPNISELTNLNWIEYHYNQRHHEPYFKFLQSPINKSSSSITINNFQTTTNHHHHRHHHQ 275

[Close]

BLAST of Cp4.1LG07g06310.1 vs. NCBI nr
Match: gi|590573945|ref|XP_007012263.1| (Myb transcription factor family protein, putative [Theobroma cacao])

HSP 1 Score: 153.7 bits (387), Expect = 3.7e-34
Identity = 95/195 (48.72%), Postives = 120/195 (61.54%), Query Frame = 1


Query: 22  KEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLD 81
           +EK +GVPWTEEEHR+FLVGL+KLGKGDWRGISR FVTTRTPTQVASHAQKYFLR NSL+
Sbjct: 93  QEKKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRKNSLN 152

Query: 82  KRKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSI---SFGIPSNSTPIHNHVHQSLL 141
           KR+ RR SLFDV + +KF  Q        P NLP  +   +  +P N     N V  +  
Sbjct: 153 KRR-RRTSLFDVGS-EKFANQKFHSRPPDPFNLPEFLLKKTSVVPINLNAATNPVQGNSG 212

Query: 142 PIWFGYEDHKAFKFLENPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVEQAEQQQ 201
            + F + +      ++      SSS          S  +APDL+LSL+ PKP++Q+E   
Sbjct: 213 DLEFAFSNDVPPLRIKESFHIQSSS-----LTMATSKSEAPDLELSLAAPKPLDQSE--- 272

Query: 202 HCCRNIPINGAISVT 214
             C +  + G ISVT
Sbjct: 273 -ACSHGLLFGPISVT 276

[Close]

BLAST of Cp4.1LG07g06310.1 vs. NCBI nr
Match: gi|661888132|emb|CDP08249.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 144.1 bits (362), Expect = 2.9e-31
Identity = 86/181 (47.51%), Postives = 113/181 (62.43%), Query Frame = 1


Query: 22  KEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLD 81
           +EK +G+PWTEEEHR+FLVGL+KLG+GDWRGISR FVTTRTPTQVASHAQKYFLR NSL+
Sbjct: 101 QEKKKGMPWTEEEHRIFLVGLEKLGRGDWRGISRNFVTTRTPTQVASHAQKYFLRQNSLN 160

Query: 82  KRKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSISFG--IP-----------SNSTP 141
           ++ +RRPSLFD+  RDK  +Q V+   S       SIS G  +P           S+S+P
Sbjct: 161 RKINRRPSLFDMVERDKSALQSVRPIFSWSIEQECSISGGMLLPKISTASCMVNFSSSSP 220

Query: 142 IHNHVHQSLLPIWFGYEDHKAFKFLENPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTP 190
               +  S +P+  G  +     F    I  SSSS++        S    P+L+L+L+ P
Sbjct: 221 PEQDLKSSQVPVPVGVSESLEHSF----IPSSSSSTNPEHDHDQNSSSPPPNLELTLAVP 277

[Close]

BLAST of Cp4.1LG07g06310.1 vs. NCBI nr
Match: gi|698456859|ref|XP_009780710.1| (PREDICTED: myb-like protein J isoform X2 [Nicotiana sylvestris])

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 77/135 (57.04%), Postives = 83/135 (61.48%), Query Frame = 1


Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKI----------------------------------- 60
           M RKCSHCG  GHNSRTC  QK KI                                   
Sbjct: 1   MGRKCSHCGITGHNSRTCKSQKAKIDEKKEDAITSNIDENLDYKVSNGYLSDELVGRTLD 60

Query: 61  --RGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKR 99
             +GVPWTEEEHR+FL+GL+KLGKGDWRGISR FVTTRTPTQVASHAQKYFLR NSL++ 
Sbjct: 61  KKKGVPWTEEEHRIFLIGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQNSLNRT 120

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g06310.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MY1R1_SOLTU	1.6e-26	39.11	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	[more]
DIV_ANTMA	4.1e-25	43.87	Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1	[more]
MYBJ_DICDI	1.3e-10	45.88	Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1	[more]
MYBI_DICDI	1.3e-07	52.73	Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1	[more]

BLAST of Cp4.1LG07g06310.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKT1_CUCSA	1.1e-42	54.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351740 PE=4 SV=1	[more]
A0A061GL43_THECC	2.6e-34	48.72	Myb transcription factor family protein, putative OS=Theobroma cacao GN=TCM_0372...	[more]
A0A068UJ77_COFCA	2.0e-31	47.51	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027018001 PE=4 SV=1	[more]
B9RRT6_RICCO	2.5e-29	44.04	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0797750 PE=4 SV=1	[more]
V4UIJ0_9ROSI	5.5e-29	45.50	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009011mg PE=4 SV=1	[more]

BLAST of Cp4.1LG07g06310.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16350.1	3.2e-28	56.45	Homeodomain-like superfamily protein	[more]
AT5G61620.1	2.7e-27	73.68	myb-like transcription factor family protein	[more]
AT5G47390.1	7.9e-27	75.00	myb-like transcription factor family protein	[more]
AT1G74840.1	8.7e-26	55.88	Homeodomain-like superfamily protein	[more]
AT1G70000.1	1.5e-25	70.51	myb-like transcription factor family protein	[more]

BLAST of Cp4.1LG07g06310.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659087473\|ref\|XP_008444471.1\|	1.1e-43	57.43	PREDICTED: myb-like protein I isoform X1 [Cucumis melo]	[more]
gi\|449450578\|ref\|XP_004143039.1\|	1.6e-42	54.77	PREDICTED: transcription factor MYB1R1-like [Cucumis sativus]	[more]
gi\|590573945\|ref\|XP_007012263.1\|	3.7e-34	48.72	Myb transcription factor family protein, putative [Theobroma cacao]	[more]
gi\|661888132\|emb\|CDP08249.1\|	2.9e-31	47.51	unnamed protein product [Coffea canephora]	[more]
gi\|698456859\|ref\|XP_009780710.1\|	1.1e-30	57.04	PREDICTED: myb-like protein J isoform X2 [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0008270	zinc ion binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf
IPR006447	Myb_dom_plants
IPR001878	Znf_CCHC
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG07g06310	Cp4.1LG07g06310	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG07g06310.1:cds:003	Cp4.1LG07g06310.1:cds:003	CDS
Cp4.1LG07g06310.1:cds:002	Cp4.1LG07g06310.1:cds:002	CDS
Cp4.1LG07g06310.1:cds:001	Cp4.1LG07g06310.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG07g06310.1:three_prime_utr:001	Cp4.1LG07g06310.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG07g06310.1	Cp4.1LG07g06310.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 29..73 score: 9.1
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 26..76 score: 1.5
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 3..18 score: 8
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 27..76 score: 7.4
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 28..72 score: 1.5
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 27..79 score: 3.74
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 22..78 score: 17
None	No IPR available	PANTHER	PTHR12374	TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED	coord: 22..102 score: 5.7
None	No IPR available	PANTHER	PTHR12374:SF19	SUBFAMILY NOT NAMED	coord: 22..102 score: 5.7