Cp4.1LG04g06420.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTCGCGCCCACCATCTCTCAACACAACTGCTCGCGCCATTTCTGCGGCACCTGAAATCCCTAAATCCTTTCGCCTTCTCTCCCTATTGACTCGCAGCTTCTATTTCTCTTGCATTCAACTCGACGATGACCGCTTTCCGTGTGCATTCCCCTGCTTCTCTCTGTTCTTTAATGGCGTTTTTTTTCGTTTGTTTACCTTTATGAATTTCTTTTACCTTTGTTCATCCGTTGCTGCTGTGTATTCTCGCAGGTTTTTGAGTTTTTGAGCTGAATCATGGTTGTGAAGTCACGAGTTCTCCGCTCTGCTACTAATGGAGAGCTGCATTCTTCAGTAACTCCTGAGGAGAAGCCGAAGCGTGCTAAAGGAGCTACGCGTGGGCGGAAGAATGTTAAAGCTGCCGCAGTGAAGGGAGATGCAGAGGAGCCATCTCCTTCTCCTCAGAGGAGGACGAGTGCTCGAATCCAGATAAAACAGCTGGCTGAGAAGGAGCTCCTAGTGCGTCAAAGAGTAGAGATCCTTGATGAAACCGACAGTCCGAGCAAAAGGAAGAAGAAGAACGGTCCAGTAAGGAGTAAGCGTAACACTAAATCTAAAGATAAGGCCGTTGCTGTTCCGGTATCCAACGATGTCACTAAATCTAAAGACGGTGGAGCGAGCGAGCCAATGGAAGTGTGTGCGCTTGAAAAGAGTACAGCTGCTGACGAAGGTGGTCCGGCCAATGTGGTTGAGAAGAGTGACCATGCCAAGGTTAAGGAGACTCTTAGGTTGTTCAACAAGTACTATCTTCATTTTGTACAGGTTTGTCGCTTGGAAATGTCACTTCGTTTGGAGTTATTTCAAAATCTATGCACATGGAAGTTTATAGTCAGCTAACTTTTGGTTATTTTGTGTTCATTTAAACTAAAAGGAAGAGGAACAAAGGTGCAAAAAAGCTGAAGTAGCTCAAAAAGCTTCCAAAGGGTCAAAATCTAAGGTAGGCTTGTGTGTCAGCTTTTTATAATTCNTTTTTCGTTAATTAAATGGGGTCGGAATTATATTCCCATCCCCACCTCGCCCGTACCACAACCACATATACATGTACGTGTGTGAATACTATGGTGTAATTGTTAAAGATGCCAATTTAACCTGCCGAACCTCAAATCAGGTAGAAAATTTTCCGTTTAAACGGAAAATGAGGAGAGAGTAAAGAGAGCTTTTTCGTTAACTAAATGGGGTCGGGNTCAGTTTGAGGGGCATAGTCAGTTTGATGGACATAGTCAAATTAAAGATTTAGTATTCAAATTTAGTATTCAAGCTGAGAATGAATGATACCCATTACTTNGGATTATATTCCCATCCCCGCCTCGCCCGCACCACAACCACATATACATGTACGTTTGTGAAATACTATAGTGTATCATTCGAACTTGAGTTTTTATAAATTATATTATATTTTTTAACTACAAAAATATTATTTAAACAATTAATAAGCACACCTCGCTAAACGACAAAGTTTTTTTTATTTAAAAAAAAAAAAAGGAAAGCTGAAATTGGCGATGCTGCCACAGAAAATGGCGACACCAAACTAGCTCACTTTCGACGAGTGTNTTAGTTTGAGGGGCATAGTCAGTTTGATGGACATAGTCAAATTGAAGATTTAGTATTCAAGCTGAGAATAAATGATATCTATTACTCAAATTGAGGGAGAGTATTGAAGGATTAGCTAGATATTTGTGTAATCCTTTATTGTTGTCTAGAATTTAGGATTTATTCAGATTTACGCACCTATTTAGCAATTTATTTGATATATTTAGATTTACTGGTACTTAGTATTTTGAGGATTTATTGTTATTGATATCTAGGATTTAGTTAGCCTTTCTACAACGAACATGTAACTCTGAAATTAATAAGAAAAATAGAAAGCTAATTTAGACTTGCAACATGGTATCATACCTTTTCTACTCTGGAAAATTTGATTCTATTTGTGTTATGTAACGGCCTAGATCCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTCCCTTCAAGGCTTTAAAGGCTTTCCCTTTCAGGCTTCCCTTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACCCCCTTATAAAGGGTGTTTTGTTCTCCTCCCCAACCAAGGTGGGACATCACAATCCACCCCCCTTCGGGGCCAGCGTCCTCGCTGGCACACTTTCCTTTCTCCAATCGATGTGGGACCCCCGCCAAATCCACCCCCCTTTGGGGCTCAGCATCCTTACTAGCACACCGTTTCGTGTCTACCCCTTTGGGGAACAGCCTCCTCGCTGGCACATAATCCAGTGTCTGGCTCTAATACCATCTGTAACGGCCCAGATTCATCGGTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAGAACGCGTTTGCTAGGGGAAGGTTTCCACACCCTTATAAAGGGTGTTTTGTTCTCCTCCCCAACCAAGGTGGGACATCACACGTTCCCACTTGATGCCTTGAACTCTTTTGTCAAGCCCACTTGCGATTTCTATTGCAACATCAGACAACGCCCATTCAACAACAACAATAATGTGGCCCATTGCATAACAAAGGTAGGAGCCCAAGTGGGTTTGAAACCATGAAGTTTGTGCTTCTTTAAGGATCATTATTGTAGTTCCACGTGTTCCATCAATTTTTGGGAATCCAATTGTTTTAAGAAAGGCCCCAACAAGCAAGATTTGAGGGAAATAAGGGTGTATTCACCATCATGTCAAAAAAATCTCAAGTCGTTCTTCCAATCGTCATCATATAACGTTAAATTACTAGATTCAGATTTGAAGTATTCAATAATTGAGGGAACCAAGGGTGTCAAGAGGAAGAAAAGGGGGTGACTACACTAGGATCTCCAAATTTGTAAGGTTGTACTCCAATGCCCGAATGGATGAATTAGAAGATACCTTAAGAAAGTCCACTACGAAAAGTGCACTGTTGTTGATGCTTCGATCTACCTAGCTGCTGTCTTCAAATACCTTGCCACAAAGGCTATGGAATTGGCCAGGAATGCAATGCGGGACAACAAGAAAAATAGGATAAACCCTAGGCATGTTCTTCTAGATGTGAAGATCAAGGGAATTACCATTGCAAGTGATATTCTTCCGAATACCAATCGGTTCTCTCTAAGAAGTGAGCACTAGAGAGGCAAATGACGCCCGTGGAAGTACTTCAAGTGGAGTGAGAACGAGAGAGGCAAGTAATGTCCTTGGAAGTGCTCCAAGAGGAACGAGCACGAGAGAAGCAAGCAACACCCATGGAGAAGTGTTCCAAGAAGAGTGAGAACGAGAGAGGCAAGGAACGACACACCTGTGGAAGTGCTCCAAGGGATAGTATGCATGAGTTATGTGCTTTCACGACTTCAACTGATAGATGTGTTGACAAAAGAACTTCACAACTACTACTTCTTGATTGAGTAACCAAGCTAAGAATGAATGATATGAGGGGGAGTGTTGAAGGATTAGTCTTAGTTAGGAAATATTGTATTGTTCATGAGTTAGTATCCAAGGTGAGAATGAGTGATATCTATTACTCAGCTTGAGGGGGAGTGTTGAAGGGTTAGCCTTGTTAGGAGATATTTGTGTAGTCTCTTATTGTTATCTAGGATTTACCTTACATTTACAGGGATTTATTTAGAGTTCGTGTTATCTTGTATGTAGAGATTTATTGTTACCTAGTATCTAGGGATTTATTGGATTTATTAGATTTATTGTTACCTAGTATTTATTGTTACTAGTATCTAGGGCTTAGTTAGCCTTTCTCCCTAATAAAAAAAACAGCTAGCTAATTTGGACTTACTACAATTAATCTTTGGATTTGGATTCTTTTTGGGGTTCTAAATCATCCTCTCATTTCTATGTTCCGGATCATTTGGAACTGGCTCTTTTTGTGTCGGTAAAAGAATATTCGTCAAAGACAAATTACCACATGTTTTGTCATCATGATTTTCCGTATTTATCTTATTGCTTGAAATTTGTACAGAAGGCGGCTCCTGAAGAAGACACAAAAAGCAAACGCAAGCGGCCAGATTTGAAGGCAATCACAAAGGCAAGTTGTTATTGA CCTCGCGCCCACCATCTCTCAACACAACTGCTCGCGCCATTTCTGCGGCACCTGAAATCCCTAAATCCTTTCGCCTTCTCTCCCTATTGACTCGCAGCTTCTATTTCTCTTGCATTCAACTCGACGATGACCGCTTTCCGTGTTTTTGAGTTTTTGAGCTGAATCATGGTTGTGAAGTCACGAGTTCTCCGCTCTGCTACTAATGGAGAGCTGCATTCTTCAGTAACTCCTGAGGAGAAGCCGAAGCGTGCTAAAGGAGCTACGCGTGGGCGGAAGAATGTTAAAGCTGCCGCAGTGAAGGGAGATGCAGAGGAGCCATCTCCTTCTCCTCAGAGGAGGACGAGTGCTCGAATCCAGATAAAACAGCTGGCTGAGAAGGAGCTCCTAGTGCGTCAAAGAGTAGAGATCCTTGATGAAACCGACAGTCCGAGCAAAAGGAAGAAGAAGAACGGTCCAGTAAGGAGTAAGCGTAACACTAAATCTAAAGATAAGGCCGTTGCTGTTCCGGTATCCAACGATGTCACTAAATCTAAAGACGGTGGAGCGAGCGAGCCAATGGAAGTGTGTGCGCTTGAAAAGAGTACAGCTGCTGACGAAGGTGGTCCGGCCAATGTGGTTGAGAAGAGTGACCATGCCAAGGTTAAGGAGACTCTTAGGTTGTTCAACAAGTACTATCTTCATTTTGTACAGAAGGCGGCTCCTGAAGAAGACACAAAAAGCAAACGCAAGCGGCCAGATTTGAAGGCAATCACAAAGGCAAGTTGTTATTGA ATGGTTGTGAAGTCACGAGTTCTCCGCTCTGCTACTAATGGAGAGCTGCATTCTTCAGTAACTCCTGAGGAGAAGCCGAAGCGTGCTAAAGGAGCTACGCGTGGGCGGAAGAATGTTAAAGCTGCCGCAGTGAAGGGAGATGCAGAGGAGCCATCTCCTTCTCCTCAGAGGAGGACGAGTGCTCGAATCCAGATAAAACAGCTGGCTGAGAAGGAGCTCCTAGTGCGTCAAAGAGTAGAGATCCTTGATGAAACCGACAGTCCGAGCAAAAGGAAGAAGAAGAACGGTCCAGTAAGGAGTAAGCGTAACACTAAATCTAAAGATAAGGCCGTTGCTGTTCCGGTATCCAACGATGTCACTAAATCTAAAGACGGTGGAGCGAGCGAGCCAATGGAAGTGTGTGCGCTTGAAAAGAGTACAGCTGCTGACGAAGGTGGTCCGGCCAATGTGGTTGAGAAGAGTGACCATGCCAAGGTTAAGGAGACTCTTAGGTTGTTCAACAAGTACTATCTTCATTTTGTACAGAAGGCGGCTCCTGAAGAAGACACAAAAAGCAAACGCAAGCGGCCAGATTTGAAGGCAATCACAAAGGCAAGTTGTTATTGA MVVKSRVLRSATNGELHSSVTPEEKPKRAKGATRGRKNVKAAAVKGDAEEPSPSPQRRTSARIQIKQLAEKELLVRQRVEILDETDSPSKRKKKNGPVRSKRNTKSKDKAVAVPVSNDVTKSKDGGASEPMEVCALEKSTAADEGGPANVVEKSDHAKVKETLRLFNKYYLHFVQKAAPEEDTKSKRKRPDLKAITKASCY
BLAST of Cp4.1LG04g06420.1 vs. TrEMBL
Match: A0A0A0L8H9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G599480 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.1e-58 Identity = 145/232 (62.50%), Postives = 160/232 (68.97%), Query Frame = 1
BLAST of Cp4.1LG04g06420.1 vs. TrEMBL
Match: A0A061EKW7_THECC (SET domain protein OS=Theobroma cacao GN=TCM_017347 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 6.8e-13 Identity = 69/179 (38.55%), Postives = 88/179 (49.16%), Query Frame = 1
BLAST of Cp4.1LG04g06420.1 vs. TrEMBL
Match: W9R0J9_9ROSA (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Morus notabilis GN=L484_008681 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 8.9e-13 Identity = 90/239 (37.66%), Postives = 110/239 (46.03%), Query Frame = 1
BLAST of Cp4.1LG04g06420.1 vs. TrEMBL
Match: A0A059BF39_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01930 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12 Identity = 87/219 (39.73%), Postives = 104/219 (47.49%), Query Frame = 1
BLAST of Cp4.1LG04g06420.1 vs. TrEMBL
Match: A0A067L3Q8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26876 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.0e-12 Identity = 72/189 (38.10%), Postives = 97/189 (51.32%), Query Frame = 1
BLAST of Cp4.1LG04g06420.1 vs. NCBI nr
Match: gi|659098129|ref|XP_008449991.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Cucumis melo]) HSP 1 Score: 241.1 bits (614), Expect = 1.6e-60 Identity = 150/232 (64.66%), Postives = 164/232 (70.69%), Query Frame = 1
BLAST of Cp4.1LG04g06420.1 vs. NCBI nr
Match: gi|778681843|ref|XP_011651591.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 4.5e-58 Identity = 145/232 (62.50%), Postives = 160/232 (68.97%), Query Frame = 1
BLAST of Cp4.1LG04g06420.1 vs. NCBI nr
Match: gi|700203122|gb|KGN58255.1| (hypothetical protein Csa_3G599480 [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 4.5e-58 Identity = 145/232 (62.50%), Postives = 160/232 (68.97%), Query Frame = 1
BLAST of Cp4.1LG04g06420.1 vs. NCBI nr
Match: gi|702430163|ref|XP_010068638.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Eucalyptus grandis]) HSP 1 Score: 83.2 bits (204), Expect = 5.7e-13 Identity = 84/202 (41.58%), Postives = 100/202 (49.50%), Query Frame = 1
BLAST of Cp4.1LG04g06420.1 vs. NCBI nr
Match: gi|590647901|ref|XP_007032028.1| (SET domain protein [Theobroma cacao]) HSP 1 Score: 82.4 bits (202), Expect = 9.8e-13 Identity = 69/179 (38.55%), Postives = 88/179 (49.16%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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