Cp4.1LG02g04780.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g04780.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Plant/F12B17-70 protein
Location	Cp4.1LG02 : 2143857 .. 2145426 (-)
Sequence length	911

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTATTTGAAGGGGGAAGAGAGTGGGATAATTATAAGAATAATAATAAAGAAAAATAATAATAATGGTGGCGGAGTGGAGGAGCTGTTATTTGGATGTAATATTGGTTCCTTTGGGGTCATTGATAAGCTGTGGATATCATGCATGGCTTTGGCACCGAGTTCGGACTCAGCCTTTCACAACTCTCATTGGTATTAACACTAATGCTAGGCGTTTTTGGATCTCTACCATTTTACAGGTCTTTATCTCTTATCTCTTTCCTTTCTCTCTTTTTTAACTTTATATTAACTTCTTCCTCCTCTCTCGGTTCACGTTCGTCTGTTCTTGATAAAATTAGCCTTATGTTCTTAAGCTTGTTCCTGTTCGTTCGTTCGAGATGAGGAAGATAGCTCTCATTGATGAAAAAGAAGAAAACTCAATTTTTGTTGATTTGTGTTAGGATCTTATTGGTGAAATTAACTTTACGATCTTTAGCTTGTTCCTGTTCATCTGTTCGGGATGAAGTAGACAACTCTCGTAGATGAAAAGAAGAATACCCCATTTTGTTGATTCATGTTAGGGTCTTATTGGTAAAATTAACCTTACGATCTTTAGTTTGTTCCGGTTCATCTGTTTGGGATGACTTAAACAACTATCATAGATGAAGAGAAGAAGATAAACGACGGATTCCTTGATATTAAGGCGTCCAGACGATCAAAGAAGCTCTAATCTTTTATAAATAGATATGTATGATCAGATGGGTCACAGTCGATCAATTTGAGTTTCTGTGTATTCTTGGAATTAAAAAAAAAAAATAGTTTTTAAACGTTCAAATTATATATTAATAGTTATAAGCTTATAGCTAGAATTAGAGGTTTTTTAAAAAAATATAATTATTTTTGGGTTGAAAATTGGCAGGATAATGAGAAGAAGAACATCCTAGCCGTCCAATCACTGAGGAACACGATAATGGGATGCACCCTAATGGCCACCACTTCCATTCTTCTCTGTACGGGCTTAGCGGCAGTTCTCAGCAGTACGTACAGCATAAAAAAGCCTTTAAACGACGCCGTTTACGGGGCCCACGGCGAATTCATGTTAGCCCTTAAATACGTGACTTTGCTCACACTATTCCTCTTCTCCTTCTTCTGCCATTCCCTCTCCATCAGATTCATAAACCAGGTTAATATTCTGATCAACATTCCCGCCGGCGCCACCGCCGTCACTCCCGATTACATCTCCGATCTCCTCGACAAAGGCTTCCTTCTCAACACCGTCGGAAACCGCCTCTTCTACGGCGCCCTGCCGTTGCTTCTCTGGATTTTTGGCCCTGTTTTGGTCTTCGTTTGCTCTGTTTCCATGGTGCCTGTGCTTTACAATCTCGACATCGTTTGCTACGCCGCCGCCGCCGGGAAACGGAATACGCTCGCCGCCGGTGAAGCTAACGGTGATCTCAATAATGTTTAGGGCTTCGTAAATGGTTGATTTGATATATGTACGTAAATTGATCGGAGCGCTTAATTTAGGGCAAGCTGGCTGTCTCTCTTAGGCTTTGAAATAGACTTTTGACTGCGAATAATTGATGTGCCAA

mRNA sequence

TGTTATTTGAAGGGGGAAGAGAGTGGGATAATTATAAGAATAATAATAAAGAAAAATAATAATAATGGTGGCGGAGTGGAGGAGCTGTTATTTGGATGTAATATTGGTTCCTTTGGGGTCATTGATAAGCTGTGGATATCATGCATGGCTTTGGCACCGAGTTCGGACTCAGCCTTTCACAACTCTCATTGGTATTAACACTAATGCTAGGCGTTTTTGGATCTCTACCATTTTACAGGATAATGAGAAGAAGAACATCCTAGCCGTCCAATCACTGAGGAACACGATAATGGGATGCACCCTAATGGCCACCACTTCCATTCTTCTCTGTACGGGCTTAGCGGCAGTTCTCAGCAGTACGTACAGCATAAAAAAGCCTTTAAACGACGCCGTTTACGGGGCCCACGGCGAATTCATGTTAGCCCTTAAATACGTGACTTTGCTCACACTATTCCTCTTCTCCTTCTTCTGCCATTCCCTCTCCATCAGATTCATAAACCAGGTTAATATTCTGATCAACATTCCCGCCGGCGCCACCGCCGTCACTCCCGATTACATCTCCGATCTCCTCGACAAAGGCTTCCTTCTCAACACCGTCGGAAACCGCCTCTTCTACGGCGCCCTGCCGTTGCTTCTCTGGATTTTTGGCCCTGTTTTGGTCTTCGTTTGCTCTGTTTCCATGGTGCCTGTGCTTTACAATCTCGACATCGTTTGCTACGCCGCCGCCGCCGGGAAACGGAATACGCTCGCCGCCGGTGAAGCTAACGGTGATCTCAATAATGTTTAGGGCTTCGTAAATGGTTGATTTGATATATGTACGTAAATTGATCGGAGCGCTTAATTTAGGGCAAGCTGGCTGTCTCTCTTAGGCTTTGAAATAGACTTTTGACTGCGAATAATTGATGTGCCAA

Coding sequence (CDS)

ATGGTGGCGGAGTGGAGGAGCTGTTATTTGGATGTAATATTGGTTCCTTTGGGGTCATTGATAAGCTGTGGATATCATGCATGGCTTTGGCACCGAGTTCGGACTCAGCCTTTCACAACTCTCATTGGTATTAACACTAATGCTAGGCGTTTTTGGATCTCTACCATTTTACAGGATAATGAGAAGAAGAACATCCTAGCCGTCCAATCACTGAGGAACACGATAATGGGATGCACCCTAATGGCCACCACTTCCATTCTTCTCTGTACGGGCTTAGCGGCAGTTCTCAGCAGTACGTACAGCATAAAAAAGCCTTTAAACGACGCCGTTTACGGGGCCCACGGCGAATTCATGTTAGCCCTTAAATACGTGACTTTGCTCACACTATTCCTCTTCTCCTTCTTCTGCCATTCCCTCTCCATCAGATTCATAAACCAGGTTAATATTCTGATCAACATTCCCGCCGGCGCCACCGCCGTCACTCCCGATTACATCTCCGATCTCCTCGACAAAGGCTTCCTTCTCAACACCGTCGGAAACCGCCTCTTCTACGGCGCCCTGCCGTTGCTTCTCTGGATTTTTGGCCCTGTTTTGGTCTTCGTTTGCTCTGTTTCCATGGTGCCTGTGCTTTACAATCTCGACATCGTTTGCTACGCCGCCGCCGCCGGGAAACGGAATACGCTCGCCGCCGGTGAAGCTAACGGTGATCTCAATAATGTTTAG

Protein sequence

MVAEWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKYVTLLTLFLFSFFCHSLSIRFINQVNILINIPAGATAVTPDYISDLLDKGFLLNTVGNRLFYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGKRNTLAAGEANGDLNNV

Homology

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BLAST of Cp4.1LG02g04780.1 vs. TrEMBL
Match: A0A0A0LEJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G888520 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.7e-114
Identity = 211/240 (87.92%), Postives = 222/240 (92.50%), Query Frame = 1


Query: 1   MVAEWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDN 60
           M  EWRSCYLD+ILVPLG LIS GYHAWLWHRVRTQPFTTLIGINTNARRFWIS+ILQDN
Sbjct: 1   MRGEWRSCYLDIILVPLGFLISSGYHAWLWHRVRTQPFTTLIGINTNARRFWISSILQDN 60

Query: 61  EKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLA 120
           EKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHG+FML 
Sbjct: 61  EKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGDFMLG 120

Query: 121 LKYVTLLTLFLFSFFCHSLSIRFINQVNILINIPAGATAVTPDYISDLLDKGFLLNTVGN 180
           LKYVTLLTLFLFSFFCHSLSIRFINQVNILINIP GA ++T DYISDLLDKGF+LNTVGN
Sbjct: 121 LKYVTLLTLFLFSFFCHSLSIRFINQVNILINIPPGAASITTDYISDLLDKGFILNTVGN 180

Query: 181 RLFYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGKRNTLAAGEANGDLNNV 240
           RLFY ALP+LLWIFGPVLVFVCSVSMVPVLYNLD+VC    A KR T+ AG  NG+L+NV
Sbjct: 181 RLFYAALPMLLWIFGPVLVFVCSVSMVPVLYNLDVVCSHTTA-KRKTIVAGGGNGELSNV 239

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BLAST of Cp4.1LG02g04780.1 vs. TrEMBL
Match: A0A151RC16_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_038532 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.6e-93
Identity = 171/214 (79.91%), Postives = 194/214 (90.65%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EWR CYLDVILVPLG L S GYH WLWHRVRTQP TT+IGIN + RR W++ +++DN+KK
Sbjct: 2   EWRKCYLDVILVPLGFLTSIGYHFWLWHRVRTQPHTTIIGINASGRRNWVNAMMKDNDKK 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQSLRNTIMG TLMATTSILLC+GLAAV+SSTYS+KKPLNDAVYGAHGEFM+ALKY
Sbjct: 62  NILAVQSLRNTIMGATLMATTSILLCSGLAAVISSTYSVKKPLNDAVYGAHGEFMVALKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINIPAG-ATAVTPDYISDLLDKGFLLNTVGNRL 183
           VTLLT+FLFSFFCHSLSIRFINQVNILIN P    + VTP YI+++L+KGF+LNTVGNRL
Sbjct: 122 VTLLTIFLFSFFCHSLSIRFINQVNILINTPQDPLSLVTPQYINEILEKGFILNTVGNRL 181

Query: 184 FYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIV 217
           FY  LPLLLWIFGPVLVF+CS++MVPVLYNLD+V
Sbjct: 182 FYSGLPLLLWIFGPVLVFLCSLTMVPVLYNLDVV 215

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BLAST of Cp4.1LG02g04780.1 vs. TrEMBL
Match: W9SKA8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019887 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.6e-93
Identity = 173/223 (77.58%), Postives = 197/223 (88.34%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EWR CYLDVILVPLG LI  GYH WLWH+VRTQP +T+IGIN N RRFW+S I++DNEKK
Sbjct: 2   EWRPCYLDVILVPLGFLIVAGYHVWLWHKVRTQPESTIIGINANGRRFWVSAIVKDNEKK 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQ+LRNTIMG TLMATTSILLC+GLAAV+SSTYS+KKPLND VYGAHG+FM+ALKY
Sbjct: 62  NILAVQTLRNTIMGSTLMATTSILLCSGLAAVISSTYSVKKPLNDTVYGAHGDFMVALKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINIPAGATA-VTPDYISDLLDKGFLLNTVGNRL 183
           VTLLT+FLFSF CHSLSIRFINQVNILIN P   T+ VT  YI++LL+KG+LLNT+GNRL
Sbjct: 122 VTLLTIFLFSFLCHSLSIRFINQVNILINSPQDDTSLVTTAYIAELLEKGYLLNTIGNRL 181

Query: 184 FYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGKR 226
           FY ALPLLLWIFGPVLVF+CS++MVPVLYNLD V   +  G+R
Sbjct: 182 FYAALPLLLWIFGPVLVFLCSLTMVPVLYNLDFVFNGSGGGER 224

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BLAST of Cp4.1LG02g04780.1 vs. TrEMBL
Match: A0A0S3RN18_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G188700 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.7e-93
Identity = 173/222 (77.93%), Postives = 197/222 (88.74%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EWR CYLDVILVPLG L S GYH WLWH+VRTQP TT+IGIN + RR W++ +++DNEKK
Sbjct: 2   EWRKCYLDVILVPLGFLTSIGYHFWLWHKVRTQPHTTIIGINASGRRNWVNAMMKDNEKK 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQSLRNTIMG TLMATTSILLC+GLAAV+SSTYS+KKPL+DAVYGAHGEFM+ALKY
Sbjct: 62  NILAVQSLRNTIMGATLMATTSILLCSGLAAVISSTYSVKKPLSDAVYGAHGEFMVALKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINIPAG-ATAVTPDYISDLLDKGFLLNTVGNRL 183
           VTLLT+FLFSFFCHSLSIRFINQVNILIN P    + VTP YI+++L+KGF+LNTVGNRL
Sbjct: 122 VTLLTIFLFSFFCHSLSIRFINQVNILINTPQDPMSLVTPQYINEILEKGFILNTVGNRL 181

Query: 184 FYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGK 225
           FY  LPLLLWIFGPVLVF+CS++MVPVLYNLD V +  A GK
Sbjct: 182 FYAGLPLLLWIFGPVLVFLCSLTMVPVLYNLDFV-FTTAKGK 222

[Close]

BLAST of Cp4.1LG02g04780.1 vs. TrEMBL
Match: A0A0L9UZW3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g210400 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.7e-93
Identity = 173/222 (77.93%), Postives = 197/222 (88.74%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EWR CYLDVILVPLG L S GYH WLWH+VRTQP TT+IGIN + RR W++ +++DNEKK
Sbjct: 2   EWRKCYLDVILVPLGFLTSIGYHFWLWHKVRTQPHTTIIGINASGRRNWVNAMMKDNEKK 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQSLRNTIMG TLMATTSILLC+GLAAV+SSTYS+KKPL+DAVYGAHGEFM+ALKY
Sbjct: 62  NILAVQSLRNTIMGATLMATTSILLCSGLAAVISSTYSVKKPLSDAVYGAHGEFMVALKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINIPAG-ATAVTPDYISDLLDKGFLLNTVGNRL 183
           VTLLT+FLFSFFCHSLSIRFINQVNILIN P    + VTP YI+++L+KGF+LNTVGNRL
Sbjct: 122 VTLLTIFLFSFFCHSLSIRFINQVNILINTPQDPMSLVTPQYINEILEKGFILNTVGNRL 181

Query: 184 FYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGK 225
           FY  LPLLLWIFGPVLVF+CS++MVPVLYNLD V +  A GK
Sbjct: 182 FYAGLPLLLWIFGPVLVFLCSLTMVPVLYNLDFV-FTTAKGK 222

[Close]

BLAST of Cp4.1LG02g04780.1 vs. TAIR10
Match: AT4G31330.1 (AT4G31330.1 Protein of unknown function, DUF599)

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-87
Identity = 156/218 (71.56%), Postives = 186/218 (85.32%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EWR CYLDVILVPLG ++   YH +LWH++RTQP TT+IG N  ARRFW+++I++DN+KK
Sbjct: 2   EWRECYLDVILVPLGLMVYASYHVYLWHKLRTQPLTTIIGTNARARRFWVASIIKDNDKK 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQ+LRN IMG TLMATTSILLC GLAAVLSSTY++KKPLNDAV+GA GEFM+ALKY
Sbjct: 62  NILAVQTLRNCIMGSTLMATTSILLCAGLAAVLSSTYAVKKPLNDAVFGARGEFMVALKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINIPAGATAV-------TPDYISDLLDKGFLLN 183
           VT+LT+FLFSFF HSLSIRFINQVNILIN P     +         +Y+++LL++GF+LN
Sbjct: 122 VTILTIFLFSFFSHSLSIRFINQVNILINTPFPPEELEDEMMMTAEEYVAELLERGFILN 181

Query: 184 TVGNRLFYGALPLLLWIFGPVLVFVCSVSMVPVLYNLD 215
           TVGNRLFY ALPL+LWIFGPVLVF+CSV MVP+LYNLD
Sbjct: 182 TVGNRLFYAALPLMLWIFGPVLVFLCSVVMVPLLYNLD 219

[Close]

BLAST of Cp4.1LG02g04780.1 vs. TAIR10
Match: AT5G10580.1 (AT5G10580.1 Protein of unknown function, DUF599)

HSP 1 Score: 304.3 bits (778), Expect = 6.7e-83
Identity = 153/222 (68.92%), Postives = 180/222 (81.08%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EW   YLD +LVP   L+  GYH +LW++VRT PF T++G N+ ARR W++ I++DNEKK
Sbjct: 2   EWEKWYLDAVLVPSALLMMFGYHIYLWYKVRTDPFCTIVGTNSRARRSWVAAIMKDNEKK 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQ+LRNTIMG TLMATT ILLC GLAAVLSSTYSIKKPLNDAVYGAHG+F +ALKY
Sbjct: 62  NILAVQTLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHGDFTVALKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINIPAG---------ATAVTPDYISDLLDKGFL 183
           VT+LT+FLF+FF HSLSIRFINQVNILIN P            + VTP+Y+S+LL+K FL
Sbjct: 122 VTILTIFLFAFFSHSLSIRFINQVNILINAPQEPFSDDFGEIGSFVTPEYVSELLEKAFL 181

Query: 184 LNTVGNRLFYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIV 217
           LNTVGNRLFY  LPL+LWIFGPVLVF+ S  ++PVLYNLD V
Sbjct: 182 LNTVGNRLFYMGLPLMLWIFGPVLVFLSSALIIPVLYNLDFV 223

[Close]

BLAST of Cp4.1LG02g04780.1 vs. TAIR10
Match: AT5G24790.1 (AT5G24790.1 Protein of unknown function, DUF599)

HSP 1 Score: 268.1 bits (684), Expect = 5.3e-72
Identity = 133/219 (60.73%), Postives = 171/219 (78.08%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EW+  YLD ILVPL  ++   YH +L   VRT PF+TL+GIN++ RR WIS +++DN+K 
Sbjct: 2   EWKKWYLDAILVPLALMMMICYHIYLSFMVRTNPFSTLLGINSHGRRIWISAMIKDNQKT 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQ+LRN +MG TLMATT +LLC GLAAVLSSTYSIKKPLNDAV+GAHG+F +++KY
Sbjct: 62  NILAVQTLRNIVMGATLMATTCVLLCAGLAAVLSSTYSIKKPLNDAVFGAHGDFAISIKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINI------PAGATAVTPDYISDLLDKGFLLNT 183
           +T+LT+F+FSFF HSLSIRF+NQV IL+NI      P+G   +T +++S++ +KG  LNT
Sbjct: 122 LTILTIFIFSFFFHSLSIRFLNQVAILVNIPNLDPNPSGCVFLTSEHVSEMFEKGIFLNT 181

Query: 184 VGNRLFYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIV 217
           VGNRLFY    L+LWIFGP+LVF   + MV VL +LD V
Sbjct: 182 VGNRLFYAGFSLMLWIFGPILVFFSVLVMVLVLSHLDFV 220

[Close]

BLAST of Cp4.1LG02g04780.1 vs. TAIR10
Match: AT5G24600.1 (AT5G24600.1 Protein of unknown function, DUF599)

HSP 1 Score: 141.4 bits (355), Expect = 7.5e-34
Identity = 78/220 (35.45%), Postives = 129/220 (58.64%), Query Frame = 1


Query: 9   YLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKKNILAV 68
           YLD  LVPLG  +   YH WL +R+  +P +T++G+N   RR W+  +++D+ K  +LAV
Sbjct: 5   YLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNGVLAV 64

Query: 69  QSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKYVTLLT 128
           Q+LRN IM  TL+A+T+I+LC+ +A +++S    +      V+G   +   +LK+  +L 
Sbjct: 65  QTLRNNIMASTLLASTAIMLCSLIAVLMTSATGERSVW--FVFGDKSDRAFSLKFFAILV 124

Query: 129 LFLFSFFCHSLSIRFINQVNILINIP-------------AGATAVTPDYISDLLDKGFLL 188
            FL +F  +  SIR+ +  +ILIN+P              G+  +  DY++  +++G   
Sbjct: 125 CFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVAATVNRGSYF 184

Query: 189 NTVGNRLFYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDI 216
            ++G R FY + PL LWIFGP+ +F+    +V  LY LD+
Sbjct: 185 WSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLDL 222

[Close]

BLAST of Cp4.1LG02g04780.1 vs. TAIR10
Match: AT3G18215.1 (AT3G18215.1 Protein of unknown function, DUF599)

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33
Identity = 74/211 (35.07%), Postives = 120/211 (56.87%), Query Frame = 1


Query: 5   WRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKKN 64
           W    LD++LVP G ++   YH WL + +  +P  T+I +N  +RR W+ +++ +  K  
Sbjct: 2   WTEESLDLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNG 61

Query: 65  ILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKYV 124
            LAVQ++RN IM  TL+ATT+I LC+ +   +S++ S K    + +YG+    + + K  
Sbjct: 62  TLAVQTIRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNF 121

Query: 125 TLLTLFLFSFFCHSLSIRFINQVNILINIPAG-ATAVTPDYISDLLDKGFLLNTVGNRLF 184
            +L  FL +F C+  SIR+   V+ L+ +P         +Y+S  L++     ++G R F
Sbjct: 122 AILICFLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREHCEYVSRNLNRASYFWSLGLRAF 181

Query: 185 YGALPLLLWIFGPVLVFVCSVSMVPVLYNLD 215
           Y + PL LW FGP+ +FVC   M  +LY LD
Sbjct: 182 YFSFPLFLWTFGPIPMFVCCCMMSSILYFLD 212

[Close]

BLAST of Cp4.1LG02g04780.1 vs. NCBI nr
Match: gi|449437314|ref|XP_004136437.1| (PREDICTED: uncharacterized protein LOC101209101 [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 5.3e-114
Identity = 211/240 (87.92%), Postives = 222/240 (92.50%), Query Frame = 1


Query: 1   MVAEWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDN 60
           M  EWRSCYLD+ILVPLG LIS GYHAWLWHRVRTQPFTTLIGINTNARRFWIS+ILQDN
Sbjct: 1   MRGEWRSCYLDIILVPLGFLISSGYHAWLWHRVRTQPFTTLIGINTNARRFWISSILQDN 60

Query: 61  EKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLA 120
           EKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHG+FML 
Sbjct: 61  EKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGDFMLG 120

Query: 121 LKYVTLLTLFLFSFFCHSLSIRFINQVNILINIPAGATAVTPDYISDLLDKGFLLNTVGN 180
           LKYVTLLTLFLFSFFCHSLSIRFINQVNILINIP GA ++T DYISDLLDKGF+LNTVGN
Sbjct: 121 LKYVTLLTLFLFSFFCHSLSIRFINQVNILINIPPGAASITTDYISDLLDKGFILNTVGN 180

Query: 181 RLFYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGKRNTLAAGEANGDLNNV 240
           RLFY ALP+LLWIFGPVLVFVCSVSMVPVLYNLD+VC    A KR T+ AG  NG+L+NV
Sbjct: 181 RLFYAALPMLLWIFGPVLVFVCSVSMVPVLYNLDVVCSHTTA-KRKTIVAGGGNGELSNV 239

[Close]

BLAST of Cp4.1LG02g04780.1 vs. NCBI nr
Match: gi|659132569|ref|XP_008466268.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103503728 [Cucumis melo])

HSP 1 Score: 417.2 bits (1071), Expect = 2.0e-113
Identity = 207/240 (86.25%), Postives = 222/240 (92.50%), Query Frame = 1


Query: 1   MVAEWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDN 60
           M  EWRSCYLD+ILVPLG LIS GYHAWLWHRVRTQPFTTLIGINTNARRFWI++ILQDN
Sbjct: 1   MGGEWRSCYLDIILVPLGFLISSGYHAWLWHRVRTQPFTTLIGINTNARRFWIASILQDN 60

Query: 61  EKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLA 120
           EKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHG+FML 
Sbjct: 61  EKKNILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGDFMLG 120

Query: 121 LKYVTLLTLFLFSFFCHSLSIRFINQVNILINIPAGATAVTPDYISDLLDKGFLLNTVGN 180
           LKYVTLLTLFLFSFFCHSLSIRFINQVNILINIP GA ++T +YISDLLDKGF+LNTVGN
Sbjct: 121 LKYVTLLTLFLFSFFCHSLSIRFINQVNILINIPXGAASITTNYISDLLDKGFILNTVGN 180

Query: 181 RLFYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGKRNTLAAGEANGDLNNV 240
           RLFY ALP+LLWIFGPVLVFVCSVSMVPVLYNLD+VC  A   ++ T+ AG  NG+L+NV
Sbjct: 181 RLFYAALPMLLWIFGPVLVFVCSVSMVPVLYNLDVVCSDATGKQKTTIVAGGGNGELSNV 240

[Close]

BLAST of Cp4.1LG02g04780.1 vs. NCBI nr
Match: gi|1012195829|ref|XP_015971820.1| (PREDICTED: uncharacterized protein LOC107495218 [Arachis duranensis])

HSP 1 Score: 358.6 bits (919), Expect = 8.5e-96
Identity = 176/222 (79.28%), Postives = 204/222 (91.89%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EWR CYLDVILVPL  ++S GYH WLWH+VRT P TT+IGIN++ARR W++T+L+DN+KK
Sbjct: 2   EWRKCYLDVILVPLALIVSIGYHMWLWHKVRTHPHTTIIGINSSARRNWVNTMLKDNDKK 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQSLRNTIMG TLMATTSILLC+GLAAV+SSTYS+KKPLNDAVYGAHGEFM+ALKY
Sbjct: 62  NILAVQSLRNTIMGSTLMATTSILLCSGLAAVISSTYSVKKPLNDAVYGAHGEFMVALKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINIPAG-ATAVTPDYISDLLDKGFLLNTVGNRL 183
           VTLLTLFLFSFFCHSLSIRFINQVNILINIP    + VTP+YIS++L++GF+LNTVGNR+
Sbjct: 122 VTLLTLFLFSFFCHSLSIRFINQVNILINIPQDPMSLVTPEYISEILERGFMLNTVGNRI 181

Query: 184 FYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGK 225
           FYGALPLLLWIFGPVLVF+C+++MVPVLYNLDIV +  A GK
Sbjct: 182 FYGALPLLLWIFGPVLVFLCTITMVPVLYNLDIV-FTTAKGK 222

[Close]

BLAST of Cp4.1LG02g04780.1 vs. NCBI nr
Match: gi|694384049|ref|XP_009367953.1| (PREDICTED: uncharacterized protein LOC103957506 [Pyrus x bretschneideri])

HSP 1 Score: 351.7 bits (901), Expect = 1.0e-93
Identity = 173/234 (73.93%), Postives = 205/234 (87.61%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EWR CYLDVILVPLG L++  YHAWLWH+VRT P +T+IGINT+ RRFW+S +++DNEKK
Sbjct: 2   EWRKCYLDVILVPLGFLMTASYHAWLWHKVRTDPRSTIIGINTSGRRFWVSAMMKDNEKK 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQ+LRNTIMG TLMATTSILLC+GLAAV+SSTYS+KKPLND VYGAHGEFM+ALKY
Sbjct: 62  NILAVQTLRNTIMGSTLMATTSILLCSGLAAVISSTYSVKKPLNDTVYGAHGEFMVALKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINIPAGATA-VTPDYISDLLDKGFLLNTVGNRL 183
           VTLLT+FLFSF CHSLSIRFINQVNILIN P   T+ VTP+Y+S LL+KG+LLNT GNRL
Sbjct: 122 VTLLTIFLFSFMCHSLSIRFINQVNILINSPQEPTSLVTPEYVSALLEKGYLLNTAGNRL 181

Query: 184 FYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGKRNTLAAGEANGD 237
           FY ALPL+LWIFGPVLVF+CS +MVPVLYNLD V  ++++ ++  + +G  NGD
Sbjct: 182 FYAALPLVLWIFGPVLVFLCSATMVPVLYNLDFV--SSSSTEKTEMDSGNENGD 233

[Close]

BLAST of Cp4.1LG02g04780.1 vs. NCBI nr
Match: gi|470110052|ref|XP_004291301.1| (PREDICTED: uncharacterized protein LOC101313473 [Fragaria vesca subsp. vesca])

HSP 1 Score: 351.3 bits (900), Expect = 1.3e-93
Identity = 173/229 (75.55%), Postives = 200/229 (87.34%), Query Frame = 1


Query: 4   EWRSCYLDVILVPLGSLISCGYHAWLWHRVRTQPFTTLIGINTNARRFWISTILQDNEKK 63
           EWR CYLDVILVPLG LI  GYH WLWH VRT+P TT+IGINT  RR W+S +++DNEKK
Sbjct: 2   EWRKCYLDVILVPLGFLIMAGYHGWLWHNVRTKPETTIIGINTRGRRLWVSAMIKDNEKK 61

Query: 64  NILAVQSLRNTIMGCTLMATTSILLCTGLAAVLSSTYSIKKPLNDAVYGAHGEFMLALKY 123
           NILAVQ+LRNTIMG TLMATTSILLC+GLAAV+SSTYS+KKPLNDAVYGAHGEFM+ALKY
Sbjct: 62  NILAVQTLRNTIMGSTLMATTSILLCSGLAAVISSTYSVKKPLNDAVYGAHGEFMVALKY 121

Query: 124 VTLLTLFLFSFFCHSLSIRFINQVNILINIPAGATA-VTPDYISDLLDKGFLLNTVGNRL 183
           VTLLT+FLFSF CHSLSIRFINQVNILIN P   T+ VTP+Y+S+LL+KG++LNTVGNRL
Sbjct: 122 VTLLTIFLFSFMCHSLSIRFINQVNILINSPQDPTSPVTPEYVSELLEKGYILNTVGNRL 181

Query: 184 FYGALPLLLWIFGPVLVFVCSVSMVPVLYNLDIVCYAAAAGKRNTLAAG 232
           FY ALPLLLWIFGPVLVF+CS+++VP+LYNLD V  +     +N  A+G
Sbjct: 182 FYAALPLLLWIFGPVLVFLCSITLVPMLYNLDFVLRSPDQKGKNMDASG 230

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g04780.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g04780.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEJ6_CUCSA	3.7e-114	87.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G888520 PE=4 SV=1	[more]
A0A151RC16_CAJCA	1.6e-93	79.91	Uncharacterized protein OS=Cajanus cajan GN=KK1_038532 PE=4 SV=1	[more]
W9SKA8_9ROSA	1.6e-93	77.58	Uncharacterized protein OS=Morus notabilis GN=L484_019887 PE=4 SV=1	[more]
A0A0S3RN18_PHAAN	4.7e-93	77.93	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G188700 PE=...	[more]
A0A0L9UZW3_PHAAN	4.7e-93	77.93	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g210400 PE=4 SV=1	[more]

BLAST of Cp4.1LG02g04780.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31330.1	1.2e-87	71.56	Protein of unknown function, DUF599	[more]
AT5G10580.1	6.7e-83	68.92	Protein of unknown function, DUF599	[more]
AT5G24790.1	5.3e-72	60.73	Protein of unknown function, DUF599	[more]
AT5G24600.1	7.5e-34	35.45	Protein of unknown function, DUF599	[more]
AT3G18215.1	2.2e-33	35.07	Protein of unknown function, DUF599	[more]

BLAST of Cp4.1LG02g04780.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437314\|ref\|XP_004136437.1\|	5.3e-114	87.92	PREDICTED: uncharacterized protein LOC101209101 [Cucumis sativus]	[more]
gi\|659132569\|ref\|XP_008466268.1\|	2.0e-113	86.25	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103503728 [Cucumis me...	[more]
gi\|1012195829\|ref\|XP_015971820.1\|	8.5e-96	79.28	PREDICTED: uncharacterized protein LOC107495218 [Arachis duranensis]	[more]
gi\|694384049\|ref\|XP_009367953.1\|	1.0e-93	73.93	PREDICTED: uncharacterized protein LOC103957506 [Pyrus x bretschneideri]	[more]
gi\|470110052\|ref\|XP_004291301.1\|	1.3e-93	75.55	PREDICTED: uncharacterized protein LOC101313473 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006747	DUF599

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG02g04780	Cp4.1LG02g04780	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g04780.1:five_prime_utr:001	Cp4.1LG02g04780.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g04780.1:cds:001	Cp4.1LG02g04780.1:cds:001	CDS
Cp4.1LG02g04780.1:cds:002	Cp4.1LG02g04780.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g04780.1:three_prime_utr:001	Cp4.1LG02g04780.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g04780.1	Cp4.1LG02g04780.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006747	Protein of unknown function DUF599	PFAM	PF04654	DUF599	coord: 13..216 score: 8.7
None	No IPR available	PANTHER	PTHR31881	FAMILY NOT NAMED	coord: 4..217 score: 3.3E
None	No IPR available	PANTHER	PTHR31881:SF6	SUBFAMILY NOT NAMED	coord: 4..217 score: 3.3E
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..23 score: