CmoCh06G016870.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCTCGTTGTCGCTGTGGCGTTTCTGAGCAACAGTCCCGCCGTTGACGCCGCCAGAATAGTGCCCGGAGACTTTGCGAGCGCCAATCACTTGGAGATGTACCCGTCGGCGTACGAGCATGCGAAGAATACGGTGTCGTGTTGGCTCGGCCGCTTGTCGTCCGGCCCCAGCCCCAAAGGTCCCGGCCACTGATTTCTCCGCAGCCAACCGGCCGTCGTTCGCCGTACCAGCGCTTTGCTGAAGCCCATCTTCCTTTTCTCCCTCTGTTCGTTTTTTCAATTCATTTGATGTATTTATTTTATTATTTATAGTTAAGTGTCAAAAGACCAAAATGGTCAAAGGTTCTTTTATTTTAGCGACATTTAAGTATGAGAAATTCGGATATTTACGTCTTTAGATCTGAATTTTTCTATTTATTTGCAATGATATGATATTAATGAAAATTAAAAGAAGACAAATATAATAAATTTGAAATAGGAATTTTATTTATTATTTGTCCGCTATTTTATTATGATTCATGTCTAACACGTTAATATATTGATACATGAGAAATTGCTTAATGTAAGTGTATGAATTAAATTTTAATACAGTGAACGTATATTAAAATTTCGTCTTTTAAATTGATGTTCTAACTCACTTAAATACCACAAAAAATTTAAACCCGTCAAATTAATAATAGAAGAGGCTCGATAAATTGCTTACAAATTTAAAATTATTCGTAAAAAATTGATCTTTAAAGTTTTGGTTTCGAGTTTAGCAATATTTGGAGGTGGGAAATTAAAATTTTGAGCTGTTGGTTGAGATATTAAGTTTCAATGTTAAATCCAACGTGATTATATACAGAACATACAATAAGTATGGATTAACCGAAAGTGGATTAAAAATTAATGAGAGAAATGAACCAACCAGAATATGCTTGAAGGGCAGGCAAAGCCACGTAGCTGGGAAACGACCAAACAGGCTTTCATCACAATGGGGGGATAAGAGCCGAAAATGGAAACCGCCCAATTTCAGTCTGTGAAAGAAGATGTGTAGGAAAGTGCTTTGCCCACATCCGCCACTACCACTTTCATTTTCCATTGAACACAATCGGAGTGCTTGCCTACTCTAATCTGCCCATTTCTCAGCGGGTAAGTGATGATTTCTTCATGGGTTTTCATCCCCCACTTCGATTGCATCGTTTTCTTTGGATATTTGATATACCCTTTTCGTAGAATTGATATGGACGGTGTTGTTTTTGATATCATTGCTTGTCAGAGTGTAACCTAGAACCGTGGTGGCCGGAGAAGTGGATTTATTGCTCTGTGGTGTACCGTTTATGTGCTATTAGTGTCTTTTGATTTTGGTTCTGAAATTCTTGGTCTCCGTTGA ATGATCCTCGTTGTCGCTGTGGCGTTTCTGAGCAACAGTCCCGCCGTTGACGCCGCCAGAATAGTGCCCGGAGACTTTGCGAGCGCCAATCACTTGGAGATGTACCCGTCGGCGTACGAGCATGCGAAGAATACGGTGTCGTGTTGGCTCGGCCGCTTGTCGTCCGGCCCCAGCCCCAAAGGAAAGTGCTTTGCCCACATCCGCCACTACCACTTTCATTTTCCATTGAACACAATCGGAGTGCTTGCCTACTCTAATCTGCCCATTTCTCAGCGGAACCGTGGTGGCCGGAGAAGTGGATTTATTGCTCTGTGGTGTACCGTTTATGTGCTATTAGTGTCTTTTGATTTTGGTTCTGAAATTCTTGGTCTCCGTTGA ATGATCCTCGTTGTCGCTGTGGCGTTTCTGAGCAACAGTCCCGCCGTTGACGCCGCCAGAATAGTGCCCGGAGACTTTGCGAGCGCCAATCACTTGGAGATGTACCCGTCGGCGTACGAGCATGCGAAGAATACGGTGTCGTGTTGGCTCGGCCGCTTGTCGTCCGGCCCCAGCCCCAAAGGAAAGTGCTTTGCCCACATCCGCCACTACCACTTTCATTTTCCATTGAACACAATCGGAGTGCTTGCCTACTCTAATCTGCCCATTTCTCAGCGGAACCGTGGTGGCCGGAGAAGTGGATTTATTGCTCTGTGGTGTACCGTTTATGTGCTATTAGTGTCTTTTGATTTTGGTTCTGAAATTCTTGGTCTCCGTTGA
BLAST of CmoCh06G016870.1 vs. TrEMBL
Match: A0A0A0KU27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011070 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.1e-20 Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 1
BLAST of CmoCh06G016870.1 vs. TrEMBL
Match: A0A067L755_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05738 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 5.2e-11 Identity = 34/61 (55.74%), Postives = 49/61 (80.33%), Query Frame = 1
BLAST of CmoCh06G016870.1 vs. TrEMBL
Match: A0A067LI60_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05732 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.2e-10 Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 1
BLAST of CmoCh06G016870.1 vs. TrEMBL
Match: B9TBZ9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_2133810 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 4.4e-10 Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 1
BLAST of CmoCh06G016870.1 vs. TrEMBL
Match: B9IFV6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s10640g PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 7.5e-10 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1
BLAST of CmoCh06G016870.1 vs. NCBI nr
Match: gi|700197850|gb|KGN53008.1| (hypothetical protein Csa_4G011070 [Cucumis sativus]) HSP 1 Score: 106.7 bits (265), Expect = 3.0e-20 Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 1
BLAST of CmoCh06G016870.1 vs. NCBI nr
Match: gi|643738283|gb|KDP44271.1| (hypothetical protein JCGZ_05738 [Jatropha curcas]) HSP 1 Score: 75.5 bits (184), Expect = 7.4e-11 Identity = 34/61 (55.74%), Postives = 49/61 (80.33%), Query Frame = 1
BLAST of CmoCh06G016870.1 vs. NCBI nr
Match: gi|643738277|gb|KDP44265.1| (hypothetical protein JCGZ_05732 [Jatropha curcas]) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-10 Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 1
BLAST of CmoCh06G016870.1 vs. NCBI nr
Match: gi|223522026|gb|EEF26615.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 72.4 bits (176), Expect = 6.3e-10 Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 1
BLAST of CmoCh06G016870.1 vs. NCBI nr
Match: gi|224138838|ref|XP_002322914.1| (hypothetical protein POPTR_0016s10640g [Populus trichocarpa]) HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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