CmoCh03G014170.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAATTCCCGTATAGCAAGGTTCGTTACCGAGGTGGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACGTCAAAAGTGTTGGATACCATCAGTGAAGAGGAGAGAGATGGCAGCAAGAATGAGTATCCTGCTTCTCCAAGAAGCCTACCATCATCAACAACCCCTGCGCCTATGGTTGTTAGTGCCAATTCTATGTACTTCGTCAGAAACATAAATAGATCTTTCTCCAAATTCAATGATTGAATAATTTGTTGTCTGGAGTGAAAATTGGGACTTTGAGGCTTCATCACCATATCCTGTAGTTGAATTTTCATGTCGTTGTGGGATGAGTTCCTGAAATTTGTGCTCGCACAGTTTCCAGTGAACTTGCTAAAAGACTGTAATGCAAAATCTTATGTATAGTTTGTCGAGTTTGAAATGAGGAATTTGTAATGTTAAAATGCATAAGAATACTGTCATTCAGTCCAACGGTTTCAACGCAGATTAGTCAACAGAACATGCAAGATTAAACATTCAAATCATGCCTGCCATTTAATCTTTCCCTACACGGCCTAAACGAGTTTTTCATATGTTACGAAATGGGACATTAAACTCTCAGAGGAACTTGTTTGTTAGTACCAACCTTTTTCTTTGGAGGAGTTCGAATCTTTTCGTTTGCGCACTCTGGAAGACATGAATGTGCTTTCTTTCTGATTCAACCTTTTCCTTCAGTTTCTCTAGGGCTGTTAATCATTACAAATCAAAATAAGAAAAATGTATGGAGAACATCTATATGAACAAAAATAATAGAGGATTATTTATTTATTTATGTAACAGCTTCGCTGGAAACAACAATCCTTCCCAACAAATTAACCCAGCAACCTTCTTTACTTTTGGATAA ATGGCAAATTCCCGTATAGCAAGGTTCGTTACCGAGGTGGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACGTCAAAAGTGTTGGATACCATCAGTGAAGAGGAGAGAGATGGCAGCAAGAATGAGTATCCTGCTTCTCCAAGAAGCCTACCATCATCAACAACCCCTGCGCCTATGGTTGTTAGTGCCAATTCTATCTTCGCTGGAAACAACAATCCTTCCCAACAAATTAACCCAGCAACCTTCTTTACTTTTGGATAA ATGGCAAATTCCCGTATAGCAAGGTTCGTTACCGAGGTGGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACGTCAAAAGTGTTGGATACCATCAGTGAAGAGGAGAGAGATGGCAGCAAGAATGAGTATCCTGCTTCTCCAAGAAGCCTACCATCATCAACAACCCCTGCGCCTATGGTTGTTAGTGCCAATTCTATCTTCGCTGGAAACAACAATCCTTCCCAACAAATTAACCCAGCAACCTTCTTTACTTTTGGATAA
BLAST of CmoCh03G014170.1 vs. TrEMBL
Match: A0A0A0KI68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G524100 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 2.5e-20 Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. TrEMBL
Match: W9QKX7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011438 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.2e-11 Identity = 42/67 (62.69%), Postives = 49/67 (73.13%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. TrEMBL
Match: B9HZP8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s02600g PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-10 Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. TrEMBL
Match: V4SN09_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026747mg PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-10 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. TrEMBL
Match: A0A067E7Q8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032717mg PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-10 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. TAIR10
Match: AT1G30260.1 (AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)) HSP 1 Score: 65.5 bits (158), Expect = 1.9e-11 Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. TAIR10
Match: AT4G21060.1 (AT4G21060.1 Galactosyltransferase family protein) HSP 1 Score: 47.4 bits (111), Expect = 5.4e-06 Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. NCBI nr
Match: gi|700194216|gb|KGN49420.1| (hypothetical protein Csa_6G524100 [Cucumis sativus]) HSP 1 Score: 105.9 bits (263), Expect = 3.6e-20 Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. NCBI nr
Match: gi|659078200|ref|XP_008439600.1| (PREDICTED: uncharacterized protein LOC103484347 [Cucumis melo]) HSP 1 Score: 101.3 bits (251), Expect = 8.9e-19 Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. NCBI nr
Match: gi|703076931|ref|XP_010090460.1| (hypothetical protein L484_011438 [Morus notabilis]) HSP 1 Score: 74.7 bits (182), Expect = 8.9e-11 Identity = 42/67 (62.69%), Postives = 49/67 (73.13%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. NCBI nr
Match: gi|224116416|ref|XP_002317294.1| (hypothetical protein POPTR_0011s02600g [Populus trichocarpa]) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10 Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 1
BLAST of CmoCh03G014170.1 vs. NCBI nr
Match: gi|567868817|ref|XP_006427030.1| (hypothetical protein CICLE_v10026747mg [Citrus clementina]) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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