CmoCh03G010900.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGCCTCAAACTCGCGAAAATTTCGCCCAAAATCCATCACTTTCACCACTCTCCCGCTCCTCTTTCTCCGCCGCCGATCCAGATCCCGGCGAACGTCCTCTAGCTCCAACTACTGTCGCCGTCTCGGCCGCCGCGGACTTCAGTGATGTAGGCATCGAGGATCCCGATTTGATTCGAGAACCTAAACGGCGGAAGCACTGTCCGTCAGCTCTGGAGAATCTCGACGAGTTGACGTCGGCGTCGAACTCCAGCTTTGGCTTCACTTTCGACACCAAATTTTGCGGAGTCTCAGCCGAGATCACTCCGAAATTCGGATCGTTCAACTCGATCGTTTCGGAAATGGAGTCGACGAAGAAGGAGAAGAAAGAGCAGAGGTCGGTTCTCGATTCGGCGAGTAAAACGAGAGGAGACGAAGAAAGAGAAGAGTCCGTAAATCGAGGTAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGAAAAGGAAGTCGCCGATGCGTTGCTAGAAGCAATTGAAGGAGGAGGTCTGGAATCTGTAGCGGATTGA ATGGCAGAGCCTCAAACTCGCGAAAATTTCGCCCAAAATCCATCACTTTCACCACTCTCCCGCTCCTCTTTCTCCGCCGCCGATCCAGATCCCGGCGAACGTCCTCTAGCTCCAACTACTGTCGCCGTCTCGGCCGCCGCGGACTTCAGTGATGTAGGCATCGAGGATCCCGATTTGATTCGAGAACCTAAACGGCGGAAGCACTGTCCGTCAGCTCTGGAGAATCTCGACGAGTTGACGTCGGCGTCGAACTCCAGCTTTGGCTTCACTTTCGACACCAAATTTTGCGGAGTCTCAGCCGAGATCACTCCGAAATTCGGATCGTTCAACTCGATCGTTTCGGAAATGGAGTCGACGAAGAAGGAGAAGAAAGAGCAGAGGTCGGTTCTCGATTCGGCGAGTAAAACGAGAGGAGACGAAGAAAGAGAAGAGTCCGTAAATCGAGGTAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGAAAAGGAAGTCGCCGATGCGTTGCTAGAAGCAATTGAAGGAGGAGGTCTGGAATCTGTAGCGGATTGA ATGGCAGAGCCTCAAACTCGCGAAAATTTCGCCCAAAATCCATCACTTTCACCACTCTCCCGCTCCTCTTTCTCCGCCGCCGATCCAGATCCCGGCGAACGTCCTCTAGCTCCAACTACTGTCGCCGTCTCGGCCGCCGCGGACTTCAGTGATGTAGGCATCGAGGATCCCGATTTGATTCGAGAACCTAAACGGCGGAAGCACTGTCCGTCAGCTCTGGAGAATCTCGACGAGTTGACGTCGGCGTCGAACTCCAGCTTTGGCTTCACTTTCGACACCAAATTTTGCGGAGTCTCAGCCGAGATCACTCCGAAATTCGGATCGTTCAACTCGATCGTTTCGGAAATGGAGTCGACGAAGAAGGAGAAGAAAGAGCAGAGGTCGGTTCTCGATTCGGCGAGTAAAACGAGAGGAGACGAAGAAAGAGAAGAGTCCGTAAATCGAGGTAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGAAAAGGAAGTCGCCGATGCGTTGCTAGAAGCAATTGAAGGAGGAGGTCTGGAATCTGTAGCGGATTGA
BLAST of CmoCh03G010900.1 vs. TrEMBL
Match: A0A0A0L245_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G420180 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 5.5e-41 Identity = 117/177 (66.10%), Postives = 127/177 (71.75%), Query Frame = 1
BLAST of CmoCh03G010900.1 vs. TrEMBL
Match: A0A0V0HAK9_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 9.1e-12 Identity = 67/184 (36.41%), Postives = 95/184 (51.63%), Query Frame = 1
BLAST of CmoCh03G010900.1 vs. TrEMBL
Match: W9S7C4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027885 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11 Identity = 58/138 (42.03%), Postives = 77/138 (55.80%), Query Frame = 1
BLAST of CmoCh03G010900.1 vs. TrEMBL
Match: M1CPV9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028103 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.5e-11 Identity = 66/184 (35.87%), Postives = 95/184 (51.63%), Query Frame = 1
BLAST of CmoCh03G010900.1 vs. TrEMBL
Match: K4D2Y7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.5e-09 Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = 1
BLAST of CmoCh03G010900.1 vs. NCBI nr
Match: gi|778694676|ref|XP_011653847.1| (PREDICTED: uncharacterized protein LOC105435263 isoform X1 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 7.8e-41 Identity = 117/177 (66.10%), Postives = 127/177 (71.75%), Query Frame = 1
BLAST of CmoCh03G010900.1 vs. NCBI nr
Match: gi|778694679|ref|XP_011653849.1| (PREDICTED: uncharacterized protein LOC105435263 isoform X2 [Cucumis sativus]) HSP 1 Score: 173.7 bits (439), Expect = 3.0e-40 Identity = 110/161 (68.32%), Postives = 119/161 (73.91%), Query Frame = 1
BLAST of CmoCh03G010900.1 vs. NCBI nr
Match: gi|659111461|ref|XP_008455747.1| (PREDICTED: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Cucumis melo]) HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39 Identity = 114/178 (64.04%), Postives = 128/178 (71.91%), Query Frame = 1
BLAST of CmoCh03G010900.1 vs. NCBI nr
Match: gi|970056961|ref|XP_015055124.1| (PREDICTED: uncharacterized protein LOC107001678 [Solanum pennellii]) HSP 1 Score: 80.5 bits (197), Expect = 3.4e-12 Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 1
BLAST of CmoCh03G010900.1 vs. NCBI nr
Match: gi|703155556|ref|XP_010111232.1| (hypothetical protein L484_027885 [Morus notabilis]) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-11 Identity = 58/138 (42.03%), Postives = 77/138 (55.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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