CmaCh19G003990.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G003990.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Expansin-related protein 1
Location	Cma_Chr19 : 4771494 .. 4773711 (+)
Sequence length	1191

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGTTGGCCTCAAAATCTCACACTTATAAATAAAGGCTCTCTCAACCCAAATGTTCCCAACAATCTCATCTTTTCCTAAATTCTTTTAACTCCTAAACCATTTTCTTTGAGGATTTTCACAAACACTTTGCTTTTGAGGCCTATACTTAATGGAGATCTCAGTTAAATGTCCCATTTTTGGCTGCCTCTTGCTCGTGCTCTTGCCTATGCTATGCTCCTCTCAAGACAACTTTGTATACTCTAGAGCCACTTATTATGGCAGCCCTGATTGCTATGGGACACCATGTATGCCCCTTTCAATTCTACCATTTTCGGTTTCTATTTTTGAAAATTGTGCACGTTTTCACATCTTTTTAAAGAACAATTTGAATTCTCTACTTAATTTCATAAACGAAAATAAGTTATAAGATCCCACATTGGTGGGGGAGGAGAACGAAACACTCTTTATAAGATTATGGAAACATTTCCTTAGCCGACGTGTTTTAAAAATTTTGAGGGGAAGCTCAAAAGAAAAAGCTCAAAGAGGTCAATATCTGCTAGCAGTGGACCTGAGCCGTTACATAAATGATTTTAGAACGCTAACATGCAATTTTTTAAAACATTAACGAGGTATGATTAAGGTACTAAACATTCTTTCAGCTGGGGCTTGTGGATTTGGTGACTTCGGAAGGACTGTGAATGATGGCAATGTTGCTGCCGTTTCTTATCTCTATAGGAATGGTTCTGGTTGTGGTGCATGCTACCAGGTATCATTCATTATTATGTTAGCTCACTTTCTAATAAACTATTAGCATAAGTTTAATTTAAGATGTAATTTAGTGTTAATGGTGGTTCAGGTTAGGTGCACTAATCCAACATATTGCAGTGATAGTGGAGCCTATGTAGTGGTGACTGACCATGGTGAAGGGGATTACACTGACTTTATCTTGAGCCCACGAGCCTTTGCAAAATTGGCTCATCCAAACACAGCCTTTGAATTGTTCTCTTATGGTGTGGTTGATGTACAATTCAGAAGGGTTTCATGCCAATACCCAAATTACAACACGGTCAAGTTCAAGGTTCATGAGCATAGTAGGTACCCGGACTACTTGGCGATTGTCATCATTTATGTCGGTGGCCAAAACGATATCACCGTCGTTGAATTGTGGCAGGTTTGTTTATTCGTTTCAGTAAACCCTAAATATCTCGTGATCGTTTTAGTATATAATTTACTCTTGTTAGAATGTATACTTCTCTCGTAATGCAACGAACTTTAGGTTTAGGATTATTGCTGGTAGTAGAGATATCCATTTATGTGAGATCTCATTTGATTGGAGAAGAGAACGAAACATTCTTTATAAGGGTATGGAAACCTCTCCCTAGTAGACACATTTTAAAAACCTTGAGGGAAAGCTTGAAAGGGAAAGTTCAAATAGGACCATATCTGCTAGTGGTGGGCTTGAGCTGTTACAATTTAACTTGTGGAGCTCTGTAAAAACCCACCTCAAACACGACGGAGAATAAGAGAGGGAGTAGGGAGAGATTTCTCCATATTAGTTAAATTGAGTTAAGGACATCCGATCTCTGTGAATACTCTGCCTCTAGGCTGACTCGTGCAAAAATAAAAGGAGAATCTTGTAGATTTAGGAACATAAAGGTTTCCCGTCTCTATTTCAAGGACTTCTGATGTTATAAGATGTCGTACTTGTTATGGGTTGTTTCTCTAACTAGGGTTTGTGATATGGTTTGTTGTAGGAGGATTGCAATGAATGGAAGGGGATGAGGAGATCTCATGGAGCTGTTTGGGACATGGCAAACCCACCTAAAGGAGACATCAAATTGAGGTTTCAAGTGAGTGGAAGTGTGGGATATGGAAGGTGGGTGATGGTAACCAATGCTCTCCCAAGCTATTGGAAGGCAGGAATTGCTTATGATACTGACATTCACCTCTATTAACCCTTTAATTAAGCATACCCGTGTTGTATTATGCATATCATAGTATACGTTATTCATATTGCTGATGTAAACGTTCTTATGAAAATTGAAATCGTTCTTATGAAAATTGGAATGTTGGTATCAGTGTAAGAATGATAACGTTGTATGAAATATGTGGTCCTAATGATGTTCTTATCAGTAAGACCTCGAGCATATGTATGATCATGAAAGAGATTACTGTAAACTTGTCGATATGAACACGAGGAAGATCAATAATATGACCCCCTATGTTTCGTGGCGA

mRNA sequence

AAAAAGTTGGCCTCAAAATCTCACACTTATAAATAAAGGCTCTCTCAACCCAAATGTTCCCAACAATCTCATCTTTTCCTAAATTCTTTTAACTCCTAAACCATTTTCTTTGAGGATTTTCACAAACACTTTGCTTTTGAGGCCTATACTTAATGGAGATCTCAGTTAAATGTCCCATTTTTGGCTGCCTCTTGCTCGTGCTCTTGCCTATGCTATGCTCCTCTCAAGACAACTTTGTATACTCTAGAGCCACTTATTATGGCAGCCCTGATTGCTATGGGACACCATCTGGGGCTTGTGGATTTGGTGACTTCGGAAGGACTGTGAATGATGGCAATGTTGCTGCCGTTTCTTATCTCTATAGGAATGGTTCTGGTTGTGGTGCATGCTACCAGGTTAGGTGCACTAATCCAACATATTGCAGTGATAGTGGAGCCTATGTAGTGGTGACTGACCATGGTGAAGGGGATTACACTGACTTTATCTTGAGCCCACGAGCCTTTGCAAAATTGGCTCATCCAAACACAGCCTTTGAATTGTTCTCTTATGGTGTGGTTGATGTACAATTCAGAAGGGTTTCATGCCAATACCCAAATTACAACACGGTCAAGTTCAAGGTTCATGAGCATAGTAGGTACCCGGACTACTTGGCGATTGTCATCATTTATGTCGGTGGCCAAAACGATATCACCGTCGTTGAATTGTGGCAGGAGGATTGCAATGAATGGAAGGGGATGAGGAGATCTCATGGAGCTGTTTGGGACATGGCAAACCCACCTAAAGGAGACATCAAATTGAGGTTTCAAGTGAGTGGAAGTGTGGGATATGGAAGGTGGGTGATGGTAACCAATGCTCTCCCAAGCTATTGGAAGGCAGGAATTGCTTATGATACTGACATTCACCTCTATTAACCCTTTAATTAAGCATACCCGTGTTGTATTATGCATATCATAGTATACGTTATTCATATTGCTGATGTAAACGTTCTTATGAAAATTGAAATCGTTCTTATGAAAATTGGAATGTTGGTATCAGTGTAAGAATGATAACGTTGTATGAAATATGTGGTCCTAATGATGTTCTTATCAGTAAGACCTCGAGCATATGTATGATCATGAAAGAGATTACTGTAAACTTGTCGATATGAACACGAGGAAGATCAATAATATGACCCCCTATGTTTCGTGGCGA

Coding sequence (CDS)

ATGGAGATCTCAGTTAAATGTCCCATTTTTGGCTGCCTCTTGCTCGTGCTCTTGCCTATGCTATGCTCCTCTCAAGACAACTTTGTATACTCTAGAGCCACTTATTATGGCAGCCCTGATTGCTATGGGACACCATCTGGGGCTTGTGGATTTGGTGACTTCGGAAGGACTGTGAATGATGGCAATGTTGCTGCCGTTTCTTATCTCTATAGGAATGGTTCTGGTTGTGGTGCATGCTACCAGGTTAGGTGCACTAATCCAACATATTGCAGTGATAGTGGAGCCTATGTAGTGGTGACTGACCATGGTGAAGGGGATTACACTGACTTTATCTTGAGCCCACGAGCCTTTGCAAAATTGGCTCATCCAAACACAGCCTTTGAATTGTTCTCTTATGGTGTGGTTGATGTACAATTCAGAAGGGTTTCATGCCAATACCCAAATTACAACACGGTCAAGTTCAAGGTTCATGAGCATAGTAGGTACCCGGACTACTTGGCGATTGTCATCATTTATGTCGGTGGCCAAAACGATATCACCGTCGTTGAATTGTGGCAGGAGGATTGCAATGAATGGAAGGGGATGAGGAGATCTCATGGAGCTGTTTGGGACATGGCAAACCCACCTAAAGGAGACATCAAATTGAGGTTTCAAGTGAGTGGAAGTGTGGGATATGGAAGGTGGGTGATGGTAACCAATGCTCTCCCAAGCTATTGGAAGGCAGGAATTGCTTATGATACTGACATTCACCTCTATTAA

Protein sequence

MEISVKCPIFGCLLLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIHLY

Homology

[Close]

BLAST of CmaCh19G003990.1 vs. Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2)

HSP 1 Score: 296.2 bits (757), Expect = 3.4e-79
Identity = 137/239 (57.32%), Postives = 179/239 (74.90%), Query Frame = 1


Query: 14  LLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSY-LYRN 73
           ++VLLP+LC S D+FV SRATYYGSPDC   P G CG+G+FGR +N+G V+ VS+ L+ N
Sbjct: 14  VIVLLPLLCLS-DDFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNN 73

Query: 74  GSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSY 133
           G+GCGACYQVRC  P +CS+ G YVV TD GEGD TDFILSP+A+ ++A P T  +L+S+
Sbjct: 74  GTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLYSF 133

Query: 134 GVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEW 193
           GVV+V+++R+ C+Y  YN V +K+HE S  P YLAI+++YVGG NDI  VE+WQEDC EW
Sbjct: 134 GVVNVEYQRIPCRYAGYNLV-YKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEW 193

Query: 194 KGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIHL 252
           + MRR  GAV D+ NPP+G + LRF V GS G   W+   NA+P+ W AG  YD++I L
Sbjct: 194 RRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGI-NWIQSPNAIPADWTAGATYDSNILL 249

[Close]

BLAST of CmaCh19G003990.1 vs. Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2)

HSP 1 Score: 214.2 bits (544), Expect = 1.7e-54
Identity = 109/242 (45.04%), Postives = 147/242 (60.74%), Query Frame = 1


Query: 13  LLLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSYLYRN 72
           L L+L     ++  NF  SRA YY + D  GT +GAC +G FG T+N+G+V+A + LYR+
Sbjct: 13  LSLILFLSKATADANFTVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSASASLYRD 72

Query: 73  GSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTA-FELFS 132
           G GCGACYQVRCTNP YCS +G  +V+TD G  D TDFILS  AF ++A    A   L +
Sbjct: 73  GVGCGACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTALLT 132

Query: 133 YGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNE 192
            GVV +++RRVSC YPN N V FK+ E S +P+YL   I Y  G  DI  V+L +     
Sbjct: 133 LGVVGIEYRRVSCTYPNKNIV-FKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLT 192

Query: 193 WKGMRRSHGAVWDMANPPKGDIKLRFQVSGSV--GYGRWVMVTNALPSYWKAGIAYDTDI 252
            + + R+HGAVW   +PP G + +R   S     G   W++ TN +P  W AG  YD+ +
Sbjct: 193 CQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAGATYDSGV 252

[Close]

BLAST of CmaCh19G003990.1 vs. Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.2e-45
Identity = 113/268 (42.16%), Postives = 147/268 (54.85%), Query Frame = 1


Query: 1   MEISVKCPIFGC--------LLLVLL----PMLCSSQDNFVY-SRATYYGSPDCYGTPSG 60
           M +SV+C  FG         LLLV++    P L S  D  V  SRA YY S       +G
Sbjct: 1   MAVSVRC-CFGSSSLSHHARLLLVIVALLAPRLASGCDRCVRRSRAAYYTSS--LTLTAG 60

Query: 61  ACGFGDFGRTVNDGN--VAAVSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEG 120
           +CG+G    T N G    AA   LYR G GCGACYQVRC +   CS++GA VVVTD    
Sbjct: 61  SCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRART 120

Query: 121 DYTDFILSPRAFAKLAHPNTAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDY 180
           + T  +LS  AFA +A P  A  L     VDV+++RV C+Y  + ++  +V E SR P+ 
Sbjct: 121 NRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEY-RHRSLSVRVDERSRGPNE 180

Query: 181 LAIVIIYVGGQNDITVVELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGY 240
           L I  +Y GGQ DI  V++ Q   + WK M R HG  W MAN P G +++R  V+G  GY
Sbjct: 181 LTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTG--GY 240

Query: 241 -GRWVMV-TNALPSYWKAGIAYDTDIHL 252
            G+WV      LP  W+AG  YDT + +
Sbjct: 241 DGKWVWADREVLPRRWRAGEVYDTGVQI 262

[Close]

BLAST of CmaCh19G003990.1 vs. Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.7e-43
Identity = 98/250 (39.20%), Postives = 143/250 (57.20%), Query Frame = 1


Query: 11  GCLLLVLLPMLCSSQ----DNFVYS-RATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAA 70
           G L L+ + +L SS     D  ++S +A Y+ S       SGAC +G        G++AA
Sbjct: 4   GFLFLLSVVLLFSSSAAACDRCLHSSKAAYFSSASALS--SGACAYGSMATGFFAGHIAA 63

Query: 71  -VSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHP- 130
            +  +Y++GSGCGAC+QVRC NPT CS  G  V+VTD  + + TD +LS RAF  +A P 
Sbjct: 64  ALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPV 123

Query: 131 -NTAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVV 190
                +L   G+VD+++RRV C Y N   +  +V E S+ P+YLAI ++Y GGQ ++  +
Sbjct: 124 VGADRDLLKQGIVDIEYRRVPCDYGN-KKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAI 183

Query: 191 ELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGY-GRWVMVTNALPSYWKA 250
            + Q   + W  M RSHGAVW     P G ++ RF V  + GY G+ V     LP+ W+A
Sbjct: 184 YIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVV--TAGYDGKMVWSQRVLPANWEA 243

Query: 251 GIAYDTDIHL 252
           G +YD  + +
Sbjct: 244 GKSYDAGVQI 248

[Close]

BLAST of CmaCh19G003990.1 vs. Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.8e-41
Identity = 95/249 (38.15%), Postives = 142/249 (57.03%), Query Frame = 1


Query: 13  LLLVLLPMLCSSQDNFV-----YSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAA-V 72
           L L+++  L SS  N        S+A Y+ S       SGAC +G    +   G++AA +
Sbjct: 5   LFLIVVIFLFSSSVNACDRCLHRSKAAYFSSASALS--SGACAYGSMATSFFAGHIAAAI 64

Query: 73  SYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHP--N 132
             +Y++G+GCGAC+QVRC NP  CS  G  V++TD  + + TD +LS RAF  +A P   
Sbjct: 65  PSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVG 124

Query: 133 TAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVEL 192
              +L   G+VD++++RV C Y N N +  +V E S+ P+YL I ++Y GGQ ++  +++
Sbjct: 125 ADKDLLKQGIVDIEYQRVPCDYGNKN-MNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDI 184

Query: 193 WQEDCN-EWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGY-GRWVMVTNALPSYWKAG 252
            Q   +  W  M RSHGAVW     P G I+ RF V+G  GY G+ +   + LPS W+AG
Sbjct: 185 AQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTG--GYDGKMIWSQSVLPSNWEAG 244

[Close]

BLAST of CmaCh19G003990.1 vs. TrEMBL
Match: A0A0A0LHH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G912910 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 4.7e-128
Identity = 214/254 (84.25%), Postives = 232/254 (91.34%), Query Frame = 1


Query: 1   MEISVKCPIFGCL--LLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTV 60
           ME S KC   G L  LLVLLP++C SQDNFVYSRATYYGSPDCYGTPSGACGFG+FGRTV
Sbjct: 1   MEGSTKCGFLGYLFLLLVLLPVMCYSQDNFVYSRATYYGSPDCYGTPSGACGFGEFGRTV 60

Query: 61  NDGNVAAVSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFA 120
           NDGNVAAVSYLYRNGSGCGACYQVRCTNP YCS SGA VVVTDHGEGDYTDFILSPRA+A
Sbjct: 61  NDGNVAAVSYLYRNGSGCGACYQVRCTNPKYCSGSGAIVVVTDHGEGDYTDFILSPRAYA 120

Query: 121 KLAHPNTAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQND 180
           K+AHPNTA +LFSYGVVDV+FRRVSCQYP Y+T+KFKVHEHSR+PDYLAI+IIYV G+ND
Sbjct: 121 KMAHPNTALQLFSYGVVDVEFRRVSCQYPYYSTLKFKVHEHSRFPDYLAILIIYVAGKND 180

Query: 181 ITVVELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSY 240
           IT VELWQEDC EWKGMRRSHGAVWDMANPPK +IKLRFQVSGS+GYG WV+  NALP+Y
Sbjct: 181 ITAVELWQEDCKEWKGMRRSHGAVWDMANPPKDNIKLRFQVSGSMGYGNWVVANNALPNY 240

Query: 241 WKAGIAYDTDIHLY 253
           WK G+AYDTDI+LY
Sbjct: 241 WKPGVAYDTDINLY 254

[Close]

BLAST of CmaCh19G003990.1 vs. TrEMBL
Match: D7U6Z9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1455g00010 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 4.3e-97
Identity = 163/237 (68.78%), Postives = 194/237 (81.86%), Query Frame = 1


Query: 15  LVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSYLYRNGS 74
           +VLLP+LC  +D F YSRATYYGSPDC GTP+GACGFG++GR+VN GNV AVS LYRNG+
Sbjct: 15  IVLLPLLCKCEDTFTYSRATYYGSPDCLGTPTGACGFGEYGRSVNGGNVGAVSRLYRNGT 74

Query: 75  GCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSYGV 134
           GCGACYQVRC  P  C+D+G  VVVTDHGEGDYTDFILSPR F+ LA PN A +LF+YGV
Sbjct: 75  GCGACYQVRCKVPNLCADNGMKVVVTDHGEGDYTDFILSPRGFSMLARPNMAADLFAYGV 134

Query: 135 VDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEWKG 194
           V +++RRV CQYP  N + FKVHEHSR+PDYLAIV++Y  G +DIT V++WQEDC EWKG
Sbjct: 135 VGIEYRRVPCQYPGSN-IFFKVHEHSRFPDYLAIVMLYQAGLSDITAVDIWQEDCQEWKG 194

Query: 195 MRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIHL 252
           MR+S+GAVWDMANPPKG + LRFQVSG  G  +WV + N +PS WKAG+AYD+   L
Sbjct: 195 MRKSYGAVWDMANPPKGPVGLRFQVSGRGGQ-KWVQLMNVIPSDWKAGVAYDSAFQL 249

[Close]

BLAST of CmaCh19G003990.1 vs. TrEMBL
Match: A0A0D2PER7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G192500 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 8.1e-96
Identity = 163/252 (64.68%), Postives = 201/252 (79.76%), Query Frame = 1


Query: 1   MEISVKCPIFGCLLLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVND 60
           M  S+K       ++VLLP +C SQD FV SRATYYGSPDC GTPSGACGFG++GR+VND
Sbjct: 40  MGFSLKLQYCLVSVMVLLPAVCYSQDYFVKSRATYYGSPDCLGTPSGACGFGEYGRSVND 99

Query: 61  GNVAAVSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKL 120
            NVA VS LY+NG+GCGACYQVRCTNP  C+D+G  +VVTD+GEGD TDFILSPRA+A++
Sbjct: 100 ANVAGVSRLYKNGTGCGACYQVRCTNPQICADNGVNIVVTDYGEGDNTDFILSPRAYARM 159

Query: 121 AHPNTAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDIT 180
           A P+T   LF+YGVVDV+++R+ CQY  Y T + KVHEHS+YP+YLAIV++Y  G+++I 
Sbjct: 160 AQPDTGAHLFAYGVVDVEYQRIPCQYSGYKT-QVKVHEHSKYPNYLAIVVLYQAGKSEIL 219

Query: 181 VVELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWK 240
            V++WQEDC EW GMRR++GAV+DMANPP GDI LRFQV GS G   WV   N +P YWK
Sbjct: 220 SVDIWQEDCKEWIGMRRAYGAVFDMANPPSGDISLRFQVRGSAGL-TWVQAPNVIPKYWK 279

Query: 241 AGIAYDTDIHLY 253
           AG+AY+TDI LY
Sbjct: 280 AGVAYETDIQLY 289

[Close]

BLAST of CmaCh19G003990.1 vs. TrEMBL
Match: U5GMC9_POPTR (Expansin-related protein 1 OS=Populus trichocarpa GN=POPTR_0003s08140g PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 8.1e-96
Identity = 161/238 (67.65%), Postives = 191/238 (80.25%), Query Frame = 1


Query: 14  LLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSYLYRNG 73
           ++ LLP +  SQD + +SRATYYGSPDC GTPSGACGFG++GRTVND NVA VS LY+NG
Sbjct: 14  IMALLPAISYSQD-YTFSRATYYGSPDCLGTPSGACGFGEYGRTVNDANVAGVSRLYKNG 73

Query: 74  SGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSYG 133
           +GCG CYQVRC  P  C+D G  VVVTD+GEGD TDFILSPRA+A++AHPN A EL +YG
Sbjct: 74  TGCGGCYQVRCKAPNLCTDDGVNVVVTDYGEGDKTDFILSPRAYARMAHPNMAVELIAYG 133

Query: 134 VVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEWK 193
           VVDV+FRR+ C+Y  YN + FKVHEHSR+PDYLAI+++Y  GQN+I  VELWQEDC EW+
Sbjct: 134 VVDVEFRRIPCRYSGYN-LMFKVHEHSRFPDYLAIILLYQAGQNEILAVELWQEDCKEWR 193

Query: 194 GMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIHL 252
           GMRR++GAVWDM NPPKG I LRFQVSGS G   W    N +PS WKAGIAYD+ + L
Sbjct: 194 GMRRAYGAVWDMPNPPKGAISLRFQVSGSAGVTYWAQAANVIPSDWKAGIAYDSTVQL 249

[Close]

BLAST of CmaCh19G003990.1 vs. TrEMBL
Match: B9SZ01_RICCO (Major pollen allergen Ory s 1, putative OS=Ricinus communis GN=RCOM_0120910 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.8e-94
Identity = 164/238 (68.91%), Postives = 192/238 (80.67%), Query Frame = 1


Query: 14  LLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSYLYRNG 73
           L+VLLP +  SQD F  SRATYYGSPDC GTP+GACGFG++GRTVND NVA VS LY+NG
Sbjct: 12  LVVLLPAIAYSQD-FTGSRATYYGSPDCLGTPTGACGFGEYGRTVNDANVAGVSRLYKNG 71

Query: 74  SGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSYG 133
           +GCG CYQVRC  P  CSD G  VVVTD+GEGD TDFILS RA+A+LA PN A ELF+YG
Sbjct: 72  TGCGGCYQVRCKAPQICSDDGVNVVVTDYGEGDKTDFILSSRAYARLARPNMAAELFAYG 131

Query: 134 VVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEWK 193
           VVD+++RR+SC+Y  YN V FKVHEHSR+P+YLAIV++Y GGQNDI  V++WQEDC EW 
Sbjct: 132 VVDIEYRRISCRYAGYN-VMFKVHEHSRFPEYLAIVVLYQGGQNDILAVQIWQEDCKEWI 191

Query: 194 GMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIHL 252
           GMR+++GAVWDM NPPKG I LRFQVSGS G   WV   NA+PS WK G+AYD+ I L
Sbjct: 192 GMRKAYGAVWDMPNPPKGYITLRFQVSGSAGL-TWVQAKNAIPSEWKVGVAYDSAIQL 246

[Close]

BLAST of CmaCh19G003990.1 vs. TAIR10
Match: AT4G17030.1 (AT4G17030.1 expansin-like B1)

HSP 1 Score: 296.2 bits (757), Expect = 1.9e-80
Identity = 137/239 (57.32%), Postives = 179/239 (74.90%), Query Frame = 1


Query: 14  LLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSY-LYRN 73
           ++VLLP+LC S D+FV SRATYYGSPDC   P G CG+G+FGR +N+G V+ VS+ L+ N
Sbjct: 14  VIVLLPLLCLS-DDFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNN 73

Query: 74  GSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSY 133
           G+GCGACYQVRC  P +CS+ G YVV TD GEGD TDFILSP+A+ ++A P T  +L+S+
Sbjct: 74  GTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLYSF 133

Query: 134 GVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEW 193
           GVV+V+++R+ C+Y  YN V +K+HE S  P YLAI+++YVGG NDI  VE+WQEDC EW
Sbjct: 134 GVVNVEYQRIPCRYAGYNLV-YKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEW 193

Query: 194 KGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIHL 252
           + MRR  GAV D+ NPP+G + LRF V GS G   W+   NA+P+ W AG  YD++I L
Sbjct: 194 RRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGI-NWIQSPNAIPADWTAGATYDSNILL 249

[Close]

BLAST of CmaCh19G003990.1 vs. TAIR10
Match: AT4G38400.1 (AT4G38400.1 expansin-like A2)

HSP 1 Score: 175.6 bits (444), Expect = 3.8e-44
Identity = 98/250 (39.20%), Postives = 143/250 (57.20%), Query Frame = 1


Query: 11  GCLLLVLLPMLCSSQ----DNFVYS-RATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAA 70
           G L L+ + +L SS     D  ++S +A Y+ S       SGAC +G        G++AA
Sbjct: 4   GFLFLLSVVLLFSSSAAACDRCLHSSKAAYFSSASALS--SGACAYGSMATGFFAGHIAA 63

Query: 71  -VSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHP- 130
            +  +Y++GSGCGAC+QVRC NPT CS  G  V+VTD  + + TD +LS RAF  +A P 
Sbjct: 64  ALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPV 123

Query: 131 -NTAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVV 190
                +L   G+VD+++RRV C Y N   +  +V E S+ P+YLAI ++Y GGQ ++  +
Sbjct: 124 VGADRDLLKQGIVDIEYRRVPCDYGN-KKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAI 183

Query: 191 ELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGY-GRWVMVTNALPSYWKA 250
            + Q   + W  M RSHGAVW     P G ++ RF V  + GY G+ V     LP+ W+A
Sbjct: 184 YIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVV--TAGYDGKMVWSQRVLPANWEA 243

Query: 251 GIAYDTDIHL 252
           G +YD  + +
Sbjct: 244 GKSYDAGVQI 248

[Close]

BLAST of CmaCh19G003990.1 vs. TAIR10
Match: AT3G45970.1 (AT3G45970.1 expansin-like A1)

HSP 1 Score: 169.5 bits (428), Expect = 2.7e-42
Identity = 95/249 (38.15%), Postives = 142/249 (57.03%), Query Frame = 1


Query: 13  LLLVLLPMLCSSQDNFV-----YSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAA-V 72
           L L+++  L SS  N        S+A Y+ S       SGAC +G    +   G++AA +
Sbjct: 5   LFLIVVIFLFSSSVNACDRCLHRSKAAYFSSASALS--SGACAYGSMATSFFAGHIAAAI 64

Query: 73  SYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHP--N 132
             +Y++G+GCGAC+QVRC NP  CS  G  V++TD  + + TD +LS RAF  +A P   
Sbjct: 65  PSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVG 124

Query: 133 TAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVEL 192
              +L   G+VD++++RV C Y N N +  +V E S+ P+YL I ++Y GGQ ++  +++
Sbjct: 125 ADKDLLKQGIVDIEYQRVPCDYGNKN-MNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDI 184

Query: 193 WQEDCN-EWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGY-GRWVMVTNALPSYWKAG 252
            Q   +  W  M RSHGAVW     P G I+ RF V+G  GY G+ +   + LPS W+AG
Sbjct: 185 AQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTG--GYDGKMIWSQSVLPSNWEAG 244

[Close]

BLAST of CmaCh19G003990.1 vs. TAIR10
Match: AT3G45960.2 (AT3G45960.2 expansin-like A3)

HSP 1 Score: 167.5 bits (423), Expect = 1.0e-41
Identity = 92/248 (37.10%), Postives = 140/248 (56.45%), Query Frame = 1


Query: 13  LLLVLLPMLCSSQDNFV-----YSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAA-V 72
           L L+++  L SS  N        S+A+Y+ S       SGAC +G    +   G++AA +
Sbjct: 5   LYLIVVIFLFSSSVNACDRCLHRSKASYFSSASALS--SGACAYGPMATSFFAGHIAAAI 64

Query: 73  SYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTA 132
             +Y++G+GCGAC+QVRC NP  C+  G  V+VTD    + TD +LS RAF  +A P   
Sbjct: 65  PSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVG 124

Query: 133 FE--LFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVEL 192
            +  L   G+VDV+++RV C Y   N +  +V E S+ P+YLAI ++Y GGQ ++  +++
Sbjct: 125 VDKYLLKQGIVDVEYQRVPCNYGKRN-LNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDI 184

Query: 193 WQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGY-GRWVMVTNALPSYWKAGI 252
                ++W  M RSHGAVW     P G ++ +F V+G  GY G+ V     LP+ W +G 
Sbjct: 185 APVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTG--GYDGKTVWSKRVLPANWNSGR 244

[Close]

BLAST of CmaCh19G003990.1 vs. TAIR10
Match: AT1G65680.1 (AT1G65680.1 expansin B2)

HSP 1 Score: 134.4 bits (337), Expect = 9.6e-32
Identity = 78/240 (32.50%), Postives = 135/240 (56.25%), Query Frame = 1


Query: 23  SSQDNFVYSRATYYGSPDCYGTPSGACGFGD------FGRTVNDGNVAAVSYLYRNGSGC 82
           +S  ++  + +T+YG+P  YG+  GACG+G+      F + V+ G  +    L+++G GC
Sbjct: 42  TSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPS----LFKSGKGC 101

Query: 83  GACYQVRCTNPTYCSDSGAYVVVTDHGEG---DYTDFILSPRAFAKLAHPNTAFELFSYG 142
           GACYQV+CT+ + CS +   VV+TD   G   +   F LS  AF  +A      +L + G
Sbjct: 102 GACYQVKCTSKSACSKNPVTVVITDECPGCVKESVHFDLSGTAFGAMAISGQDSQLRNVG 161

Query: 143 VVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQE-DCNEW 202
            + + +++V C Y    TV F+V + S    + A+++ YV G  +I  +EL Q  D ++W
Sbjct: 162 ELQILYKKVECNYIG-KTVTFQVDKGSNANSF-AVLVAYVNGDGEIGRIELKQALDSDKW 221

Query: 203 KGMRRSHGAVW--DMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIH 251
             M +S GAVW  D+++P +  + LR     S+  G+ V+ +N +P+ W+ G  Y ++++
Sbjct: 222 LSMSQSWGAVWKLDVSSPLRAPLSLRVT---SLESGKTVVASNVIPANWQPGAIYKSNVN 272

[Close]

BLAST of CmaCh19G003990.1 vs. NCBI nr
Match: gi|659131859|ref|XP_008465892.1| (PREDICTED: expansin-like B1 [Cucumis melo])

HSP 1 Score: 466.5 bits (1199), Expect = 3.0e-128
Identity = 215/254 (84.65%), Postives = 233/254 (91.73%), Query Frame = 1


Query: 1   MEISVKCPI--FGCLLLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTV 60
           ME S KC    +  LLLVLLP++C SQDNFVYSRATYYGSPDCYGTPSGACGFG+FGRTV
Sbjct: 1   MEGSNKCGFLEYLFLLLVLLPVMCYSQDNFVYSRATYYGSPDCYGTPSGACGFGEFGRTV 60

Query: 61  NDGNVAAVSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFA 120
           NDGNVAAVSYLYRNGSGCGACYQVRCTNP YCS SGA VVVTDHGEGDYTDFILSPRA+A
Sbjct: 61  NDGNVAAVSYLYRNGSGCGACYQVRCTNPKYCSGSGAIVVVTDHGEGDYTDFILSPRAYA 120

Query: 121 KLAHPNTAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQND 180
           K+AHPNTA +LFSYGVVDV+FRRVSCQYP YNT+KFKVHEHSR+PDYLAI+IIYV G+ND
Sbjct: 121 KMAHPNTALQLFSYGVVDVEFRRVSCQYPYYNTLKFKVHEHSRFPDYLAILIIYVAGKND 180

Query: 181 ITVVELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSY 240
           IT VELWQEDCNEWKGMRRSHGAVWDMANPPK +IKLRFQVSGS+GYG W++  NALPSY
Sbjct: 181 ITAVELWQEDCNEWKGMRRSHGAVWDMANPPKDNIKLRFQVSGSMGYGNWIVANNALPSY 240

Query: 241 WKAGIAYDTDIHLY 253
           WK G+AYDTDI+LY
Sbjct: 241 WKPGVAYDTDINLY 254

[Close]

BLAST of CmaCh19G003990.1 vs. NCBI nr
Match: gi|449461307|ref|XP_004148383.1| (PREDICTED: expansin-like B1 [Cucumis sativus])

HSP 1 Score: 465.3 bits (1196), Expect = 6.7e-128
Identity = 214/254 (84.25%), Postives = 232/254 (91.34%), Query Frame = 1


Query: 1   MEISVKCPIFGCL--LLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTV 60
           ME S KC   G L  LLVLLP++C SQDNFVYSRATYYGSPDCYGTPSGACGFG+FGRTV
Sbjct: 1   MEGSTKCGFLGYLFLLLVLLPVMCYSQDNFVYSRATYYGSPDCYGTPSGACGFGEFGRTV 60

Query: 61  NDGNVAAVSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFA 120
           NDGNVAAVSYLYRNGSGCGACYQVRCTNP YCS SGA VVVTDHGEGDYTDFILSPRA+A
Sbjct: 61  NDGNVAAVSYLYRNGSGCGACYQVRCTNPKYCSGSGAIVVVTDHGEGDYTDFILSPRAYA 120

Query: 121 KLAHPNTAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQND 180
           K+AHPNTA +LFSYGVVDV+FRRVSCQYP Y+T+KFKVHEHSR+PDYLAI+IIYV G+ND
Sbjct: 121 KMAHPNTALQLFSYGVVDVEFRRVSCQYPYYSTLKFKVHEHSRFPDYLAILIIYVAGKND 180

Query: 181 ITVVELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSY 240
           IT VELWQEDC EWKGMRRSHGAVWDMANPPK +IKLRFQVSGS+GYG WV+  NALP+Y
Sbjct: 181 ITAVELWQEDCKEWKGMRRSHGAVWDMANPPKDNIKLRFQVSGSMGYGNWVVANNALPNY 240

Query: 241 WKAGIAYDTDIHLY 253
           WK G+AYDTDI+LY
Sbjct: 241 WKPGVAYDTDINLY 254

[Close]

BLAST of CmaCh19G003990.1 vs. NCBI nr
Match: gi|1009157303|ref|XP_015896691.1| (PREDICTED: expansin-like B1 [Ziziphus jujuba])

HSP 1 Score: 378.6 bits (971), Expect = 8.3e-102
Identity = 176/238 (73.95%), Postives = 201/238 (84.45%), Query Frame = 1


Query: 14  LLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSYLYRNG 73
           L+VL P+LC+SQ+ F  SRATYYGSPDCYGTPSGACGFG++GRTVN GNVA VS LYRNG
Sbjct: 14  LVVLFPLLCTSQNTFTSSRATYYGSPDCYGTPSGACGFGEYGRTVNYGNVAGVSRLYRNG 73

Query: 74  SGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSYG 133
           +GCGACYQVRCTNP YCSD GA +VVTD+GEGD TDFILSPRA+AKLA  N A ELF+YG
Sbjct: 74  TGCGACYQVRCTNPQYCSDDGANIVVTDYGEGDRTDFILSPRAYAKLAKANLALELFAYG 133

Query: 134 VVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEWK 193
           VVDV++RR+SC+Y +YN + FKVHEHSRYP YLAIVI+YV GQNDIT VELWQED  EW+
Sbjct: 134 VVDVEYRRISCKYSDYN-LMFKVHEHSRYPHYLAIVILYVAGQNDITAVELWQEDYKEWR 193

Query: 194 GMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIHL 252
            MRR++GAV+D+ANPP G I LRFQVSGS GY  WV   NA+PSYWKAG  YD+ I L
Sbjct: 194 PMRRAYGAVFDLANPPPGSITLRFQVSGSAGY-TWVQSNNAIPSYWKAGAVYDSTIQL 249

[Close]

BLAST of CmaCh19G003990.1 vs. NCBI nr
Match: gi|225466785|ref|XP_002273896.1| (PREDICTED: expansin-like B1 [Vitis vinifera])

HSP 1 Score: 362.5 bits (929), Expect = 6.1e-97
Identity = 163/237 (68.78%), Postives = 194/237 (81.86%), Query Frame = 1


Query: 15  LVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSYLYRNGS 74
           +VLLP+LC  +D F YSRATYYGSPDC GTP+GACGFG++GR+VN GNV AVS LYRNG+
Sbjct: 15  IVLLPLLCKCEDTFTYSRATYYGSPDCLGTPTGACGFGEYGRSVNGGNVGAVSRLYRNGT 74

Query: 75  GCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSYGV 134
           GCGACYQVRC  P  C+D+G  VVVTDHGEGDYTDFILSPR F+ LA PN A +LF+YGV
Sbjct: 75  GCGACYQVRCKVPNLCADNGMKVVVTDHGEGDYTDFILSPRGFSMLARPNMAADLFAYGV 134

Query: 135 VDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEWKG 194
           V +++RRV CQYP  N + FKVHEHSR+PDYLAIV++Y  G +DIT V++WQEDC EWKG
Sbjct: 135 VGIEYRRVPCQYPGSN-IFFKVHEHSRFPDYLAIVMLYQAGLSDITAVDIWQEDCQEWKG 194

Query: 195 MRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIHL 252
           MR+S+GAVWDMANPPKG + LRFQVSG  G  +WV + N +PS WKAG+AYD+   L
Sbjct: 195 MRKSYGAVWDMANPPKGPVGLRFQVSGRGGQ-KWVQLMNVIPSDWKAGVAYDSAFQL 249

[Close]

BLAST of CmaCh19G003990.1 vs. NCBI nr
Match: gi|731439032|ref|XP_003635563.2| (PREDICTED: expansin-like B1 [Vitis vinifera])

HSP 1 Score: 358.6 bits (919), Expect = 8.9e-96
Identity = 162/237 (68.35%), Postives = 193/237 (81.43%), Query Frame = 1


Query: 15  LVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSYLYRNGS 74
           +VLLP+LC  +D F YSRATYYGSPDC GTP+GACGFG++GR+VN GNV AVS LYRNG+
Sbjct: 15  IVLLPLLCKCEDTFTYSRATYYGSPDCLGTPTGACGFGEYGRSVNGGNVGAVSRLYRNGT 74

Query: 75  GCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSYGV 134
           GCGACYQVRC  P  C+D+G  VVVTDHGEGDYTDFILSPR F+ LA PN A +LF+YGV
Sbjct: 75  GCGACYQVRCKVPNLCADNGMKVVVTDHGEGDYTDFILSPRGFSMLARPNMAADLFAYGV 134

Query: 135 VDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEWKG 194
           V +++RRV CQYP  N + FKVHEHSR+PDYLAIV++Y  G +DIT V++WQEDC EWKG
Sbjct: 135 VGIEYRRVPCQYPGSN-IFFKVHEHSRFPDYLAIVMLYQAGLSDITAVDIWQEDCQEWKG 194

Query: 195 MRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGIAYDTDIHL 252
           MR+S+GAVWDMANPPKG + LRFQVSG  G  +WV + N + S WKAG+AYD+   L
Sbjct: 195 MRKSYGAVWDMANPPKGPVGLRFQVSGRGGQ-KWVQLMNVILSDWKAGVAYDSAFQL 249

The following BLAST results are available for this feature:

BLAST of CmaCh19G003990.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EXLB1_ARATH	3.4e-79	57.32	Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2	[more]
EXLB1_ORYSJ	1.7e-54	45.04	Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2	[more]
EXLA1_ORYSJ	4.2e-45	42.16	Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1	[more]
EXLA2_ARATH	6.7e-43	39.20	Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1	[more]
EXLA1_ARATH	4.8e-41	38.15	Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1	[more]

BLAST of CmaCh19G003990.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHH9_CUCSA	4.7e-128	84.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G912910 PE=3 SV=1	[more]
D7U6Z9_VITVI	4.3e-97	68.78	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1455g00010 PE=3 SV=...	[more]
A0A0D2PER7_GOSRA	8.1e-96	64.68	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G192500 PE=3 SV=1	[more]
U5GMC9_POPTR	8.1e-96	67.65	Expansin-related protein 1 OS=Populus trichocarpa GN=POPTR_0003s08140g PE=3 SV=1	[more]
B9SZ01_RICCO	5.8e-94	68.91	Major pollen allergen Ory s 1, putative OS=Ricinus communis GN=RCOM_0120910 PE=3...	[more]

BLAST of CmaCh19G003990.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17030.1	1.9e-80	57.32	expansin-like B1	[more]
AT4G38400.1	3.8e-44	39.20	expansin-like A2	[more]
AT3G45970.1	2.7e-42	38.15	expansin-like A1	[more]
AT3G45960.2	1.0e-41	37.10	expansin-like A3	[more]
AT1G65680.1	9.6e-32	32.50	expansin B2	[more]

BLAST of CmaCh19G003990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131859\|ref\|XP_008465892.1\|	3.0e-128	84.65	PREDICTED: expansin-like B1 [Cucumis melo]	[more]
gi\|449461307\|ref\|XP_004148383.1\|	6.7e-128	84.25	PREDICTED: expansin-like B1 [Cucumis sativus]	[more]
gi\|1009157303\|ref\|XP_015896691.1\|	8.3e-102	73.95	PREDICTED: expansin-like B1 [Ziziphus jujuba]	[more]
gi\|225466785\|ref\|XP_002273896.1\|	6.1e-97	68.78	PREDICTED: expansin-like B1 [Vitis vinifera]	[more]
gi\|731439032\|ref\|XP_003635563.2\|	8.9e-96	68.35	PREDICTED: expansin-like B1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007112	Expansin/allergen_DPBB_dom
IPR007117	Expansin_CBD
IPR007118	Expan_Lol_pI
IPR009009	RlpA-like_DPBB

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh19G003990	CmaCh19G003990	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh19G003990.1	CmaCh19G003990.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G003990.1.exon.4	CmaCh19G003990.1.exon.4	exon
CmaCh19G003990.1.exon.3	CmaCh19G003990.1.exon.3	exon
CmaCh19G003990.1.exon.2	CmaCh19G003990.1.exon.2	exon
CmaCh19G003990.1.exon.1	CmaCh19G003990.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G003990.1.five_prime_UTR.1	CmaCh19G003990.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G003990.1.CDS.1	CmaCh19G003990.1.CDS.1	CDS
CmaCh19G003990.1.CDS.2	CmaCh19G003990.1.CDS.2	CDS
CmaCh19G003990.1.CDS.3	CmaCh19G003990.1.CDS.3	CDS
CmaCh19G003990.1.CDS.4	CmaCh19G003990.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh19G003990.1.three_prime_UTR.1	CmaCh19G003990.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007112	Expansin/pollen allergen, DPBB domain	PROFILE	PS50842	EXPANSIN_EG45	coord: 46..149 score: 21
IPR007117	Expansin, cellulose-binding-like domain	GENE3D	G3DSA:2.60.40.760		coord: 144..250 score: 5.9
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Pollen_allerg_1	coord: 152..236 score: 6.2
IPR007117	Expansin, cellulose-binding-like domain	PROFILE	PS50843	EXPANSIN_CBD	coord: 164..247 score: 18
IPR007117	Expansin, cellulose-binding-like domain	unknown	SSF49590	PHL pollen allergen	coord: 151..246 score: 1.83
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 192..206 score: 8.5E-16coord: 66..84 score: 8.5E-16coord: 132..148 score: 8.5E-16coord: 233..247 score: 8.5E-16coord: 27..42 score: 8.5
IPR009009	RlpA-like protein, double-psi beta-barrel domain	GENE3D	G3DSA:2.40.40.10		coord: 13..143 score: 3.9
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 66..138 score: 1.2
IPR009009	RlpA-like protein, double-psi beta-barrel domain	unknown	SSF50685	Barwin-like endoglucanases	coord: 14..148 score: 6.28
None	No IPR available	PANTHER	PTHR31692	FAMILY NOT NAMED	coord: 1..252 score: 3.5E
None	No IPR available	PANTHER	PTHR31692:SF10	EXPANSIN-LIKE B1	coord: 1..252 score: 3.5E