Cla009255.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009255
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Serine/threonine-protein phosphatase 4 regulatory subunit 3 (AHRD V1 **-- F4WCE5_ACREC)
Location	Chr6 : 5029953 .. 5032539 (-)
Sequence length	381

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGCGCCAGATAGATCTCCGGCGACCTCCAATTCTATGCAGGTAAGTTATTTATTGTATCGGGAAGCTTGCTCGCTACTTTGACACTGAAAGCTACTAAGCGTTGACGTTTAGTTTAGCCTTGTAATTTCGTGGCTGAGGTTGGGTTTCTGAATGCTGGTATTTAGTTATTTAGTTGAGATTAAGTATTGTACTTCTCTCTTGCTGTAATTTGCATCTGTTTGAGAGCTTGTTCGAGTTCTGGCATTGCTCGATTTTACATTTATGGAAATTTAGCTTGCTCTGCAACCCAGAATTTATTTCTCGAAGTAGTACGAACCAAGAAGCAAATACTGTCGTCAAATTACTCACTCTGCACTACGTTTTCAGTAAATTTGTCTATGACTATGAGTAACTACTTTAAGCTTAACTACCGAGTTTGATGAGTTTACAAAAAATTAAACACCACAGGGCACTGAGAAACTGTATAGCTACCGAGAAACTCTGGAGGTAGTCGTAATCATTTAATTGAGTATTTAATAACTTCAAAAGTTTGAGGGTAATCCACTTAAAATTCAATTGGCTAAGACATATTCCTTCGGCTAAGAGGTTAGAGTGTTGAATCCTCACACCCCATATGTCTTCGATCTCTCAAAAATTTACATTAAGAGATTGGTGTCCTCAGTGTGAACTGGGGAGGACTTTTGGAAGAAAAATGCTTTTACGTAAAAGTATTTATAATGTAACTGTCAACACTTTTTGAAGAAATATTAATTAAATGCTACAATTCAAAGCACTTTGATCATTTTTGTCGCACTGCCTGGTCGTGCATCAAACGGCTTAAATATAATGCTGGAGCTATCACAGATTCGCAACAAAGACTCCTAATGCACAATATATATTGATAACTTAGTTTTCTGAAATAGTGAGCTAGCACTTAACTTGTGATTAAATTTATTGGATAATTTAGAAGTTTAAATCTTCTCATTTACAACTCCTGCCAATAAAACAAAGAGGCCACAGATTTCATGGATCCACATTCCTAGCAACAAAATTTCAGCTTTTTGAAACAGCCAACATATTTTAGTGAACATCTCCATGTACTCAAGGGATACTCACATACAATAGAATGCTACAGGTTTCCTGGTTCTTGATAAATTCTCACCCATTTTGGGATTAGTGAAATATTCATCTTCCTCCTGAATGTATTGAGATCACATCTGCTACTTTAGGTGAAGGGAGGCAATATTCCAGCTTCTAAGGCAACTTCCTCATCTAACACCTTCCCCTGTTCAATGAAAGTCTCTAATCTTTTGTTCCAATGTTTGGGGGACTATATTAGGTTGTCTTTTGAAAAGACAGAAAATATGGTGGGATTCTACAAAAAATAGATTGGATTGAGGTCAACTTGGGTTCTTTAGGCCAACATAAAGATGACCAAAAGGTCCAGGGTTTGAAGCCTCACCCCACATGTTGTTGAACTCACAACATGTCTCTGTTAGATAATCACATTTCTCTACTTTTGTTTTACAAGTTTCTTCCACCACTGGATCCAAGAATTCAGGTTTATTTGGGTTTCTCCATTTGGTCGTTAGAAAATAGGATGCCATCCATCCCCCTAGTTAGACGCCAGTCCAGCCGCTTGTGGTTCATCTCCTGCTGGTCAATATGTTTCTTACAATAACTGCCCTGCTCATGTTTCTAGCAGTTGACTGTTGCATGTATGCGGATTGTCCATTAATTGACTTGCTACATATTCAATGGCTTTATGATGATCTTGGAGAAGTTCAAACTCACTCAATTTTTATGTTATCAATTTCATTTGTTGTAAGATGTTGTACTTGATCCTTATTGTTTTACCATCAAATTTCAGCGTGTCAAAGTATATCGTTTGAATGATGATGGAAAATGGGATGATCAAGGCACTGGGCATGTTACTGTTGACTATTTGGAGGTTTGTGACTGACTTTTCCCCCTTTTATTTGTGTTGGATTGGATGAGAAACGTTGAGCTCTCCAGAAAGAGAATAATAGAAAAGAGGTTGTGCAATCTCTCAATGAAGTTTAGTTAACATGTTCTTCACTGATATGAATGTAAATTTAATTCTACTCAGAGATCGGAGGAATTGGGGTTGTGTGTTGTTGATGAAGAGGACAACGAGACTCTACTTCTACACCGTATTAGTTCAGACGACATTTACAGAAAGCAAGAAGGTTTTTCTTTCTTTTCTTATATACTTTAACAGTATCGTCGACACGAGTCTTCTTTGCAATGCGTACCTGCACTATTTTAAATTCCTGGTTGGTTTGGATGGAGGCTTATGTTGACTTTTGAAGTACTAACAAAAGTTAGCTTCTTAAATATGCAGATACTATAATCTCGTGGAGAGATCCAGAATATTCTACAGAGTTAGCTCTTAGCTTTCAAGAGACAACTGGATGCTCATACATATGGTAACTATCGAATATCTACTAGTCACTGTTTAATGTTTTTTCCCCACGATAGACTAGCTGAAAGTTGGCTTATTTTATTTAGGGATCACATCTGCAATGCGCAAAGGAATCTCCATTTTAATTCTCTCAACAGTAAGTACACAGTTATTTGA

mRNA sequence

ATGGGCGCGCCAGATAGATCTCCGGCGACCTCCAATTCTATGCAGCGTGTCAAAGTATATCGTTTGAATGATGATGGAAAATGGGATGATCAAGGCACTGGGCATGTTACTGTTGACTATTTGGAGAGATCGGAGGAATTGGGGTTGTGTGTTGTTGATGAAGAGGACAACGAGACTCTACTTCTACACCGTATTAGTTCAGACGACATTTACAGAAAGCAAGAAGATACTATAATCTCGTGGAGAGATCCAGAATATTCTACAGAGTTAGCTCTTAGCTTTCAAGAGACAACTGGATGCTCATACATATGGGATCACATCTGCAATGCGCAAAGGAATCTCCATTTTAATTCTCTCAACAGTAAGTACACAGTTATTTGA

Coding sequence (CDS)

ATGGGCGCGCCAGATAGATCTCCGGCGACCTCCAATTCTATGCAGCGTGTCAAAGTATATCGTTTGAATGATGATGGAAAATGGGATGATCAAGGCACTGGGCATGTTACTGTTGACTATTTGGAGAGATCGGAGGAATTGGGGTTGTGTGTTGTTGATGAAGAGGACAACGAGACTCTACTTCTACACCGTATTAGTTCAGACGACATTTACAGAAAGCAAGAAGATACTATAATCTCGTGGAGAGATCCAGAATATTCTACAGAGTTAGCTCTTAGCTTTCAAGAGACAACTGGATGCTCATACATATGGGATCACATCTGCAATGCGCAAAGGAATCTCCATTTTAATTCTCTCAACAGTAAGTACACAGTTATTTGA

Protein sequence

MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETLLLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLNSKYTVI

Homology

[Close]

BLAST of Cla009255 vs. Swiss-Prot
Match: SMEK_DICDI (Suppressor of Mek1 OS=Dictyostelium discoideum GN=smkA PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-22
Identity = 47/97 (48.45%), Postives = 69/97 (71.13%), Query Frame = 1


Query: 15  QRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETLLLHRISSDDIYRKQ 74
           +RVKVY+L++ GKWDD+GTGHV+  Y++    +GL V  E DN  +L  R+S++DIY+KQ
Sbjct: 6   KRVKVYQLDNSGKWDDKGTGHVSCIYVDALCAMGLIVRSESDNSVILQTRLSAEDIYQKQ 65

Query: 75  EDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQ 112
           +D++I W +P+   +LALSFQ++ GC  IW++I   Q
Sbjct: 66  QDSLIVWTEPDSQLDLALSFQDSLGCQDIWENILQYQ 102

[Close]

BLAST of Cla009255 vs. Swiss-Prot
Match: PP4R3_XENTR (Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus tropicalis GN=ppp4r3b PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.6e-21
Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = 1


Query: 11  SNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETLLLHRISSDDI 70
           S++ +RVKVY LN+D +WDD+GTGHV+  Y+ER + + L V  E D   LL  +I+ +  
Sbjct: 2   SDTRRRVKVYTLNEDRQWDDRGTGHVSSTYVERLKGMSLLVRAESDGSLLLESKINPNTA 61

Query: 71  YRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQ 112
           Y+KQ+DT+I W + E + +LALSFQE  GC  IW+ IC  Q
Sbjct: 62  YQKQQDTLIVWSEAE-NYDLALSFQEKAGCDEIWEKICQVQ 101

[Close]

BLAST of Cla009255 vs. Swiss-Prot
Match: P4R3A_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 3-A OS=Xenopus laevis GN=ppp4r3b-a PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.6e-21
Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = 1


Query: 11  SNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETLLLHRISSDDI 70
           S++ +RVKVY LN+D +WDD+GTGHV+  Y+ER + + L V  E D   LL  +I+ +  
Sbjct: 2   SDTRRRVKVYTLNEDRQWDDRGTGHVSSTYVERLKGMSLLVRAESDGSLLLESKINPNTA 61

Query: 71  YRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQ 112
           Y+KQ+DT+I W + E + +LALSFQE  GC  IW+ IC  Q
Sbjct: 62  YQKQQDTLIVWSEAE-NYDLALSFQEKAGCDEIWEKICQVQ 101

[Close]

BLAST of Cla009255 vs. Swiss-Prot
Match: PP4R3_XENLA (Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus laevis GN=smek1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.7e-21
Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 1


Query: 11  SNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETLLLHRISSDDI 70
           +++ +RVKVY LN+D +WDD+GTGHV+  Y+ER + + L V  E D   LL  +I+++  
Sbjct: 2   TDTRRRVKVYTLNEDRQWDDRGTGHVSSGYVERLKGMSLLVRAESDGSLLLESKINTNTA 61

Query: 71  YRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQ 112
           Y+KQ+DT+I W + E + +LALSFQE  GC  IW+ IC  Q
Sbjct: 62  YQKQQDTLIVWSEAE-NYDLALSFQEKAGCDEIWEKICQVQ 101

[Close]

BLAST of Cla009255 vs. Swiss-Prot
Match: P4R3A_HUMAN (Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Homo sapiens GN=PPP4R3A PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.0e-21
Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 1


Query: 11  SNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETLLLHRISSDDI 70
           +++ +RVKVY LN+D +WDD+GTGHV+  Y+ER + + L V  E D   LL  +I+ +  
Sbjct: 2   TDTRRRVKVYTLNEDRQWDDRGTGHVSSGYVERLKGMSLLVRAESDGSLLLESKINPNTA 61

Query: 71  YRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQ 112
           Y+KQ+DT+I W + E + +LALSFQE  GC  IW+ IC  Q
Sbjct: 62  YQKQQDTLIVWSEAE-NYDLALSFQEKAGCDEIWEKICQVQ 101

[Close]

BLAST of Cla009255 vs. TrEMBL
Match: A0A0A0KHY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G308410 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.4e-64
Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL
Sbjct: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHF+SLN
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFSSLN 120

Query: 121 S 122
           +
Sbjct: 121 N 121

[Close]

BLAST of Cla009255 vs. TrEMBL
Match: M5Y8A9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001245mg PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 8.8e-59
Identity = 108/122 (88.52%), Postives = 118/122 (96.72%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGAP++S A +NSMQRVKVYRLN+DGKWDDQGTGHVTVDY+ERSEELGL V+DEEDNETL
Sbjct: 1   MGAPEKSQANTNSMQRVKVYRLNEDGKWDDQGTGHVTVDYMERSEELGLFVIDEEDNETL 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQE+TGCSYIWDHIC+ QRNLHFNSLN
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQESTGCSYIWDHICSVQRNLHFNSLN 120

Query: 121 SK 123
           ++
Sbjct: 121 NE 122

[Close]

BLAST of Cla009255 vs. TrEMBL
Match: A0A0S3R9A6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G515500 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 9.7e-58
Identity = 105/122 (86.07%), Postives = 118/122 (96.72%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGAP++S A++NSMQRVKVYRLND+GKWDDQGTGHVTVDYLERSEELGL V DE+DNET+
Sbjct: 1   MGAPEKSQASTNSMQRVKVYRLNDEGKWDDQGTGHVTVDYLERSEELGLFVYDEDDNETI 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEY+TELALSFQET+GCSYIWDHICN QRN+HFN+LN
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYATELALSFQETSGCSYIWDHICNVQRNMHFNTLN 120

Query: 121 SK 123
           ++
Sbjct: 121 NE 122

[Close]

BLAST of Cla009255 vs. TrEMBL
Match: V7C898_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G112400g PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.8e-57
Identity = 105/122 (86.07%), Postives = 116/122 (95.08%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGAP++S A +NSMQRVKVYRLND+GKWDDQGTGHVTVDYLERSEELGL V DE+DNET+
Sbjct: 1   MGAPEKSQANTNSMQRVKVYRLNDEGKWDDQGTGHVTVDYLERSEELGLFVYDEDDNETI 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEY+TELALSFQE +GCSYIWDHICN QRN+HFN+LN
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMHFNTLN 120

Query: 121 SK 123
           S+
Sbjct: 121 SE 122

[Close]

BLAST of Cla009255 vs. TrEMBL
Match: A0A0A0L5W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G166230 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-56
Identity = 106/122 (86.89%), Postives = 116/122 (95.08%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGA DRS + SNSMQRVKVYRLNDDGKWDDQGTGHVTVDY+ERSEELGL V+DEEDNETL
Sbjct: 1   MGALDRSHSNSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYVERSEELGLFVIDEEDNETL 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQE TGCS+IWD+ICN QRNLHF++L+
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQEATGCSFIWDNICNVQRNLHFSNLS 120

Query: 121 SK 123
           ++
Sbjct: 121 NE 122

[Close]

BLAST of Cla009255 vs. NCBI nr
Match: gi|778714618|ref|XP_011657267.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform X2 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 3.4e-64
Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL
Sbjct: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHF+SLN
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFSSLN 120

Query: 121 S 122
           +
Sbjct: 121 N 121

[Close]

BLAST of Cla009255 vs. NCBI nr
Match: gi|700192177|gb|KGN47381.1| (hypothetical protein Csa_6G308410 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 3.4e-64
Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL
Sbjct: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHF+SLN
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFSSLN 120

Query: 121 S 122
           +
Sbjct: 121 N 121

[Close]

BLAST of Cla009255 vs. NCBI nr
Match: gi|659116994|ref|XP_008458368.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform X5 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 3.4e-64
Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL
Sbjct: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHF+SLN
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFSSLN 120

Query: 121 S 122
           +
Sbjct: 121 N 121

[Close]

BLAST of Cla009255 vs. NCBI nr
Match: gi|778714614|ref|XP_011657266.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform X1 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 3.4e-64
Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL
Sbjct: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHF+SLN
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFSSLN 120

Query: 121 S 122
           +
Sbjct: 121 N 121

[Close]

BLAST of Cla009255 vs. NCBI nr
Match: gi|659116982|ref|XP_008458361.1| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform X1 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 3.4e-64
Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60
           MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL
Sbjct: 1   MGAPDRSPATSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLCVVDEEDNETL 60

Query: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFNSLN 120
           LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHF+SLN
Sbjct: 61  LLHRISSDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNAQRNLHFSSLN 120

Query: 121 S 122
           +
Sbjct: 121 N 121

The following BLAST results are available for this feature:

BLAST of Cla009255 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SMEK_DICDI	1.1e-22	48.45	Suppressor of Mek1 OS=Dictyostelium discoideum GN=smkA PE=1 SV=1	[more]
PP4R3_XENTR	3.6e-21	48.51	Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus tropicali...	[more]
P4R3A_XENLA	3.6e-21	48.51	Serine/threonine-protein phosphatase 4 regulatory subunit 3-A OS=Xenopus laevis ...	[more]
PP4R3_XENLA	4.7e-21	47.52	Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus laevis GN...	[more]
P4R3A_HUMAN	8.0e-21	47.52	Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Homo sapiens GN=...	[more]

BLAST of Cla009255 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHY4_CUCSA	2.4e-64	98.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G308410 PE=4 SV=1	[more]
M5Y8A9_PRUPE	8.8e-59	88.52	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001245mg PE=4 SV=1	[more]
A0A0S3R9A6_PHAAN	9.7e-58	86.07	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G515500 PE=...	[more]
V7C898_PHAVU	2.8e-57	86.07	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G112400g PE=4 SV=1	[more]
A0A0A0L5W2_CUCSA	2.4e-56	86.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G166230 PE=4 SV=1	[more]

BLAST of Cla009255 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778714618\|ref\|XP_011657267.1\|	3.4e-64	98.35	PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform ...	[more]
gi\|700192177\|gb\|KGN47381.1\|	3.4e-64	98.35	hypothetical protein Csa_6G308410 [Cucumis sativus]	[more]
gi\|659116994\|ref\|XP_008458368.1\|	3.4e-64	98.35	PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform ...	[more]
gi\|778714614\|ref\|XP_011657266.1\|	3.4e-64	98.35	PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform ...	[more]
gi\|659116982\|ref\|XP_008458361.1\|	3.4e-64	98.35	PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011993	PH-like_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla009255	Cla009255	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla009255	Cla009255.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla009255.1.cds5	Cla009255.1.cds5	CDS
Cla009255.1.cds4	Cla009255.1.cds4	CDS
Cla009255.1.cds3	Cla009255.1.cds3	CDS
Cla009255.1.cds2	Cla009255.1.cds2	CDS
Cla009255.1.cds1	Cla009255.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011993	PH domain-like	GENE3D	G3DSA:2.30.29.30		coord: 16..103 score: 4.
IPR011993	PH domain-like	unknown	SSF50729	PH domain-like	coord: 15..111 score: 7.63
None	No IPR available	PANTHER	PTHR23318	ATP SYNTHASE GAMMA-RELATED	coord: 6..126 score: 3.6
None	No IPR available	PANTHER	PTHR23318:SF6	PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN-LIKE PROTEIN	coord: 6..126 score: 3.6