Carg27010-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27010-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein phosphatase 2C family protein
Location	Cucurbita_argyrosperma_scaffold_374 : 75172 .. 80434 (-)
Sequence length	906

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCGGTAGGTTTCAGCCGTTTGTCTCTCTCTCCGCCGCCTTGGCTCGCCCGGATTTCGCCGGAGGTTCGTAGTTCCGGTCAATGTTTCAGATTCCGGTGCTCTAGCTTCCATTTTCCTGTTCCAGTTCGTGTTCTGTTCATTTTCCCGGAAAATCAAGGTTCTTTTCTATTTTTCATTACTGTTTTTTTTTTTTTTCTTTTTCTCTTAGCTATTTTGGATTTGTCGTTTATTATAACTCAACCTTGTTAGACGAACACGACTCTCCACAATCGTATGATATTGTTCACTTTGAGCATAAGCTTTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCGTCATCCTAATGGAGAGTGTATTCTTAGATTATAAACCCATGACCATACCCTAAATTAACGAACGTGGAACACTCTCATCTAACACCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTGACTGCCTTCGAGGAGGCTTGACTTCCTTTTTTTTCTTTTTTGGAGTCCTTTGTTCGACATTCGAGGATTTGACAATCTATTGACACGGCTAAGTTTAGGGCATGACTCTGATACCATGTTAGACGAACACGACTCTCTACAATAGTATAATATTGTCCACTTTGAGGCCTCTTGGGAAGCCCAAAGCAAAACCAAAACCACGAGAGCTTAGGCTCAAAGTGGACAATATCATACTATTGTGGAGAGTCGTGTTCGTCTAACAAACCGATTTTAAGGGTATTTTTTATAAATTTTAAGGGTATTTTTTAAACAAAAGGTTAACCATAAGAATGAAGGGTAATAATATGTTTTAAAATTATTTTTGAAAGTTTTAGAGTATTATTGAAATTTTTAAAAATTTAAAGATATTTTTGGTGACTAATGGTAAAGCAAAAGACATTTTTAGCCCTAATTCTTTTTATAGTTGGTGATGTTTTAAATGAGGTCAACACGATTTGGTAGAAACATTGTCGTACTTTTTGTCGTGAAAGTCATGAAAGCTTATACTCAAATTAGACGATCTCATACTATTGTGAAAGGTGAGTTGTTTTATTAGCGGAATTCGAGTCATACCCTTTTTGAATAAAGGAGTTGCAAGCCTTGAAGGAATGGTTATAATGAAGATCGCCCTTGTAATAGCCTAAGCCGGTAGTGGAAATTGTCTTCTTTGAGCTATCCTTTTCGAGCTTTCTCTAAGGTTTTTAAAACATATCTGCTAGAGAGAGGTTTTCCACACCTTTATAAGGAATGTTTCGTTTTCCTCTCCAATCGATGTGGGATCTCACAATCTGTGATGTCTCACGTTGGTTAGAGTCCACACCTTTATAAGGAATGTTTCGTTTTCCTCTCCAATCGATGTGGGATCTCACAATCTGTGATGTCTCACGTTGGTTAGAGTGGAGAACAAACCACCATTTGTAAGGGTGTGGAAACCTTCCCCTATTAGACGCGTTTTGAAGCCTTGAGAGAAAGCCCGAAAGGGAAAGCCCAAAGAGAACAATATCTGCTAGCGGTAGATTTGGGCGTTACACAATCCACCCCCTTCGAGGCTCAGTGTCCACGCTGGCACTCGTTTCACTCTCCAATCGATGTGAGATTTCACAATCCACCTCCCTTGGCGTCCTCGCTAGCACATCGCCCAGTGTCCACCCCCTTTCGAGACTCATCATTCTCGCTAGCACATCACTCGGTGTCTGCCTCTGATATCATTTGTAACAGCCCAAGCCCACCGCTAATATTATCCTCTTTGGGCTTTTCCTTCCAAACTTTCCCTCAAGATTTTTAAAATGCTTCTACTAGAGAGAGGTTTCCACACCCTTATAAGAAATGTTTCATTCCCCTCTCCAAACGATGTGGGATCTCACAACCCTTATTAGGTTAATAGAATCCTCAAGTATTGAACAAAAAGATTGTGAGTCTCGAGAGCGTAGTCCTAGTGAAAATTTGTAGTAGAGTTCTATTAGATTAGTAATGTGCTCCGAAGAAGAGGTGTCATCGAGATAGTGCTAGATGGATAGATGACCATTTAATGAGAGGCTCTATGGTCTAATTTGTTCGAGAAAACGATAGACAAGAGGTACATCGTCCCTATCAATGTATTTGGTTCAAAATTTAAAATTTGAGACAGCAAACCTTTTGAGTCAGATTCTGTCATATACTCTCCAACAGCATTCCTTTTGGTTCTGAATACATGACGTTGTACAAACAAAAACCAAACAAAATAATGAATGTTTGTTTATTTCCACTTGTATTATCCAAATCTTTTATTAGATTCTATCTGATCTGTTCCAAATTTTCATTGAATAGAACTCGGGGAAGAACGACGAGCACAAGAAACCGACCATACCTCGAAAAGGCAATGGAGCACTTGTTCATGAAGCTCAAGAAATGGAAGAACTCTGAAAATGCTTCTGCTGCTGAAGCAATGGCAAAGTCTGCAAAGAAGAAGGATTTGATCATTCGTGGCTCGGGGACTATACATATCGACGGTTCAAGCAACTTCGTCTCGAGTTTCTCGAAGCGGGGCGAGAAGGGTATCAATCAGGACTGCTGCATTGTGTGGGAGGTATGCAAATATAGCTTAAAAACATGAACTTTTGTTCATAATGATTATTGTAACAACCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGTTTTCCCTTTCAGGCTTCCTCTCAAGGGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGTTTTGTTCTCCTCTCCAACCAATGTGGGACATTACAATCCACCCCCTTCAGGGCCCAGTGCCCTCGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACCGACCCCAAATCCACCCCCTTTGGGGCCCAGCGTCCTTATTGGCACACCGCTTCGTGTCTACCCCTCTTTGGGGAACAGCGAAAAGGTTGGCACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACGACCCAGATCCACCGTTAGCATATATTGTCTTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGTGTCTGCTAGGGAAAGGTTTCCACACTCTTATAAATGATGGTTTGTTTTCCTCTCCAACCAACGTAGGACATCACAGATATTGACGAATGGCTTTGATTATAGGGATTTGGATGTCAAAAGGATATGATGTTTTGTGGTGTTTTTGATGGGCATGGACCATGGGGCCATTTTGTTGCAAAGAAGGTTAGAGAATCAATGCCAATAGCTTTGCTCTACAATTGGCAAGAAGCACTTGTTCAAGCTTCTCTTCACTCACATTTGGAACTCAACTTAGCCAAAACACATCTAAAGTTCAATTTATGGGAGCATTCTTATATACAAGCTTGTGCTATGGTGGATCGAGAGCTCGAACGACACCGTAAAATCGACACGTTTCATAGTGGAACGACGGCGCTTTCCATCGTTCGACAAGTAATGTTATAGTTGTTATGTTACTCTCTTTTATATGTGTGAGATCTCACATTTGTTGGAGAGGGGAACGAAACATTTTTTATAAGGGTGTGGAAACCTCTCCCTAATAGACGCGGTTTAAAAAAAATCGTGAGGTTGATGGTGATGCGTAACGGGCCGAAGCGGACAATATCTGTTAACGGTGGGTTTGGGCTGTTACAAATTGTATCAGAGCCAGGCACTAGGCTGTGCCAGCGAGAATGGTGGCCCCCAAGGAGGGTGGATTATGAAATCCCACCTCGGTTGGAGAGGAGAATGAAGCATTCTTTATAAGAGTGTGGAAACCTCTCCCTAATAGATGAGTTTTAAAAAAACTGTGAGGCTGACGGTGATACGTAATGGGCCAAAGTGGACAATATCTGCTAAGGGTGAGCTTGGGTTGTTACAAATTGTATTAGAGTCAGACACCGGGCGATGTGCCAGCGAGGATGTTGGGCCTCCAAGGAGGGTAGATTGTGAGATCCCACATCGGTTGGACAACGAGGACGTTGGGCCTCCAAGGAGGGTAGATTGTGAGATCCCACATAGGTTGGACAACGAGGACGTGGGTCTCCAAGGACGGTAGATTGTGAGATCCCAGATAGGTTGGACAACGAGGACGTTGGGCCTCCAAGGAGGGTAGACTGTGAGATCCCACATCGGTTGGACAGCGAGGATATTAGGCCTCCAAGGAGGCTAGATTGTGAGATCCCACATCGGTTGGACAATGAGGACGTTGGACTTCCAAGGAGGGTAGATTGTGAGATCCCACATCGGTTGGACAACGAGGACGTTGGGCCTCCAAGGAGGGTAGATTGTGAGATCCCACCTCGGTTAGGGAGGGGAACAAAACATTCCTTATAAGGGTGTGGAAACCTCTCACTAACAAACCCGTTTTAAAATTATGAGGAAGACAGCGATAAGCAACGGGCCAAAGCGAACAATGTCCGCTAGATGTGGACTTGGACTGTTACCATATGATTTCTAGTGCTCATTTTCTTTATCAAGCTTTTTATATGAACTTGTGATTTATCAGGGTGATACAATTATCATTGCAAACCTCGGTGACTCCCGCGCCGTGTTGGCTACAACTTCTAACGATGGAAACTCGATGCCGACACCAATTCAGCTCACTATCGATTTCAAGCCGAATCTACCTCGTTCGTTCCTCTCTTTGTATATAAACGAGTATTGAAAAGGGAAAGCACAAAGCTCTAACATGTTTGTTATTTGTTATGCTTAGAGGAGGCCGAGAGGATAGCACAATGCAACGGGCGGGTTTTCTGCTTGCAAGATGAACCCGGGACGCACCGTATTTGGTTGCCGAACGGGGAAACGCCGGGGCTATCATTGTCGAGATCGTTCGGAGATTTTTGTGTTAAGCATTTCGGTCTCATTTCCATGCCTGATGTAACACAAAGAAGTGTAACCAACCAAGACTTGTTTGTTGTACTTGCAACAGATGGGGTAAGGCTCTTCACACTTGTTTTTCTCACCTAAATGCATGAGTGTGGTATCAAATGCTTCATCTATGTGTATCAGATATGGGACGTGGTGTCGAATCAAGAGGCGGTACAAATCGTACATTCGACCGTCGATAGAGAAAAATCAGCTCGACGTCTAGTCGATTATGCTACCGGTGCATGGAAGCGGAGGAGGCCGGGAATTGCAGCGGACGACATGTCGGTTATTGTCCTCTTTCTCCATTCTTCACCTTTGCATCATTAACCTCTTGCTCTAATGTAGCTTTACGAGCTTTAATCATACCACATGACATGG

mRNA sequence

ATGGATTCCGGTAGGTTTCAGCCGTTTGTCTCTCTCTCCGCCGCCTTGGCTCGCCCGGATTTCGCCGGAGGTTCAACTCGGGGAAGAACGACGAGCACAAGAAACCGACCATACCTCGAAAAGGCAATGGAGCACTTGTTCATGAAGCTCAAGAAATGGAAGAACTCTGAAAATGCTTCTGCTGCTGAAGCAATGGCAAAGTCTGCAAAGAAGAAGGATTTGATCATTCGTGGCTCGGGGACTATACATATCGACGGTTCAAGCAACTTCGTTAGAGAATCAATGCCAATAGCTTTGCTCTACAATTGGCAAGAAGCACTTGTTCAAGCTTCTCTTCACTCACATTTGGAACTCAACTTAGCCAAAACACATCTAAAGTTCAATTTATGGGAGCATTCTTATATACAAGCTTGTGCTATGGTGGATCGAGAGCTCGAACGACACCAGGAGGCCGAGAGGATAGCACAATGCAACGGGCGGGTTTTCTGCTTGCAAGATGAACCCGGGACGCACCGTATTTGGTTGCCGAACGGGGAAACGCCGGGGCTATCATTGTCGAGATCGTTCGGAGATTTTTGTGTTAAGCATTTCGGTCTCATTTCCATGCCTGATGTAACACAAAGAAGTGTAACCAACCAAGACTTGTTTGTTGTACTTGCAACAGATGGGATATGGGACGTGGTGTCGAATCAAGAGGCGGTACAAATCGTACATTCGACCGTCGATAGAGAAAAATCAGCTCGACGTCTAGTCGATTATGCTACCGGTGCATGGAAGCGGAGGAGGCCGGGAATTGCAGCGGACGACATGTCGGTTATTGTCCTCTTTCTCCATTCTTCACCTTTGCATCATTAACCTCTTGCTCTAATGTAGCTTTACGAGCTTTAATCATACCACATGACATGG

Coding sequence (CDS)

ATGGATTCCGGTAGGTTTCAGCCGTTTGTCTCTCTCTCCGCCGCCTTGGCTCGCCCGGATTTCGCCGGAGGTTCAACTCGGGGAAGAACGACGAGCACAAGAAACCGACCATACCTCGAAAAGGCAATGGAGCACTTGTTCATGAAGCTCAAGAAATGGAAGAACTCTGAAAATGCTTCTGCTGCTGAAGCAATGGCAAAGTCTGCAAAGAAGAAGGATTTGATCATTCGTGGCTCGGGGACTATACATATCGACGGTTCAAGCAACTTCGTTAGAGAATCAATGCCAATAGCTTTGCTCTACAATTGGCAAGAAGCACTTGTTCAAGCTTCTCTTCACTCACATTTGGAACTCAACTTAGCCAAAACACATCTAAAGTTCAATTTATGGGAGCATTCTTATATACAAGCTTGTGCTATGGTGGATCGAGAGCTCGAACGACACCAGGAGGCCGAGAGGATAGCACAATGCAACGGGCGGGTTTTCTGCTTGCAAGATGAACCCGGGACGCACCGTATTTGGTTGCCGAACGGGGAAACGCCGGGGCTATCATTGTCGAGATCGTTCGGAGATTTTTGTGTTAAGCATTTCGGTCTCATTTCCATGCCTGATGTAACACAAAGAAGTGTAACCAACCAAGACTTGTTTGTTGTACTTGCAACAGATGGGATATGGGACGTGGTGTCGAATCAAGAGGCGGTACAAATCGTACATTCGACCGTCGATAGAGAAAAATCAGCTCGACGTCTAGTCGATTATGCTACCGGTGCATGGAAGCGGAGGAGGCCGGGAATTGCAGCGGACGACATGTCGGTTATTGTCCTCTTTCTCCATTCTTCACCTTTGCATCATTAA

Protein sequence

MDSGRFQPFVSLSAALARPDFAGGSTRGRTTSTRNRPYLEKAMEHLFMKLKKWKNSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNFVRESMPIALLYNWQEALVQASLHSHLELNLAKTHLKFNLWEHSYIQACAMVDRELERHQEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVDREKSARRLVDYATGAWKRRRPGIAADDMSVIVLFLHSSPLHH

Homology

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BLAST of Carg27010-RA vs. NCBI nr
Match: XP_022961500.1 (probable protein phosphatase 2C 73 [Cucurbita moschata])

HSP 1 Score: 443.7 bits (1140), Expect = 4.6e-121
Identity = 242/349 (69.34%), Postives = 242/349 (69.34%), Query Frame = 0


Query: 43  MEHLFMKLKKWKNSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF------------ 102
           MEHLFMKLKKWKNSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF            
Sbjct: 1   MEHLFMKLKKWKNSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNFVSSFSKRGEKGI 60

Query: 103 ------------------------------------VRESMPIALLYNWQEALVQASLHS 162
                                               VRESMPIALLYNWQEALVQASLHS
Sbjct: 61  NQDCCIVWEGFGCQKDMMFCGVFDGHGPWGHFVAKKVRESMPIALLYNWQEALVQASLHS 120

Query: 163 HLELNLAKTHLKFNLWEHSYIQACAMVDRELERH-------------------------- 222
           HLELNLAKTHLKFNLWEHSYIQACAMVDRELERH                          
Sbjct: 121 HLELNLAKTHLKFNLWEHSYIQACAMVDRELERHRKIDTFHSGTTALSIVRQGDTIIIAN 180

Query: 223 ---------------------------------QEAERIAQCNGRVFCLQDEPGTHRIWL 282
                                            QEAERIAQCNGRVFCLQDEPGTHRIWL
Sbjct: 181 LGDSRAVLATTSNDGNSMPTPIQLTIDFKPNLPQEAERIAQCNGRVFCLQDEPGTHRIWL 240

Query: 283 PNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQ 285
           PNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQ
Sbjct: 241 PNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQ 300

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BLAST of Carg27010-RA vs. NCBI nr
Match: XP_023516780.1 (probable protein phosphatase 2C 73 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.3 bits (1113), Expect = 6.2e-118
Identity = 236/349 (67.62%), Postives = 239/349 (68.48%), Query Frame = 0


Query: 43  MEHLFMKLKKWKNSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF------------ 102
           MEHLFMKLK WKNSENASAAEAMAKSAKKKDLIIRGSG+IHIDGSSNF            
Sbjct: 1   MEHLFMKLKNWKNSENASAAEAMAKSAKKKDLIIRGSGSIHIDGSSNFVSSFSKRGEKGI 60

Query: 103 ------------------------------------VRESMPIALLYNWQEALVQASLHS 162
                                               VRESMPIALLYNWQEALVQAS HS
Sbjct: 61  NQDCCIVWEEFGCQKDMMFCGVFDGHGPWGHFVAKKVRESMPIALLYNWQEALVQASPHS 120

Query: 163 HLELNLAKTHLKFNLWEHSYIQACAMVDRELERH-------------------------- 222
           HLELNLAKTHLKFNLWEHSYIQACAMVDRELERH                          
Sbjct: 121 HLELNLAKTHLKFNLWEHSYIQACAMVDRELERHRKIDTFHSGTTALSIVRQGDTIIIAN 180

Query: 223 ---------------------------------QEAERIAQCNGRVFCLQDEPGTHRIWL 282
                                            QEAERIAQCNGRVFCLQDEPGTHRIWL
Sbjct: 181 LGDSRAVLATTSNDGNSMPTPIQLTIDFKPNLPQEAERIAQCNGRVFCLQDEPGTHRIWL 240

Query: 283 PNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQ 285
           PNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQ
Sbjct: 241 PNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQ 300

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BLAST of Carg27010-RA vs. NCBI nr
Match: XP_022968748.1 (probable protein phosphatase 2C 73 [Cucurbita maxima])

HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100
Identity = 212/352 (60.23%), Postives = 219/352 (62.22%), Query Frame = 0


Query: 43  MEHLFMKL---KKWKNSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF--------- 102
           MEHLFMKL                      KKKDLII GSG++HIDGSSNF         
Sbjct: 1   MEHLFMKLXXXXXXXXXXXXXXXXXXXXXXKKKDLIIHGSGSMHIDGSSNFVSSFSKRGE 60

Query: 103 ---------------------------------------VRESMPIALLYNWQEALVQAS 162
                                                  VRESMPIALLYNWQEALVQAS
Sbjct: 61  KGINQDCCIVWEEFGCQKDMMFCGVFDGHGPWGHFVAKKVRESMPIALLYNWQEALVQAS 120

Query: 163 LHSHLELNLAKTHLKFNLWEHSYIQACAMVDRELERH----------------------- 222
           LH HLELNLAKTHLKFNLWEHSY QACAMVD ELERH                       
Sbjct: 121 LHPHLELNLAKTHLKFNLWEHSYEQACAMVDGELERHRKIDTFHSGTTALSIVRQGDTII 180

Query: 223 ------------------------------------QEAERIAQCNGRVFCLQDEPGTHR 282
                                               QEAERIAQC+GRVFCLQDEPGTHR
Sbjct: 181 IANLGDSRAVLATTSNDRNSMPTPIQLTIDFKPNLPQEAERIAQCSGRVFCLQDEPGTHR 240

Query: 283 IWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQE 285
           IWLPNG+TPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQE
Sbjct: 241 IWLPNGKTPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQE 300

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BLAST of Carg27010-RA vs. NCBI nr
Match: XP_008450566.1 (PREDICTED: probable protein phosphatase 2C 34 [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 1.3e-99
Identity = 211/366 (57.65%), Postives = 230/366 (62.84%), Query Frame = 0


Query: 40  EKAMEHLFMKL---------KKWKNSENAS------AAEAMAKSAKKKDLIIRGSGTIHI 99
           EKAM+HLF K          KKW+NSENAS      AAEAMAKSAKKKDLII GSG+I+I
Sbjct: 3   EKAMKHLFFKFNELTKSITSKKWRNSENASVVSGREAAEAMAKSAKKKDLIIHGSGSINI 62

Query: 100 DGSSNF------------------------------------------------VRESMP 159
           DGSSNF                                                VRESMP
Sbjct: 63  DGSSNFVSSFSKRGEKGINQDCCIVWEEFGCQKDMIFCGVFDGHGPWGHFVAKKVRESMP 122

Query: 160 IALLYNWQEALVQASLHSHLELNLAKTHLKFNLWEHSYIQACAMVDRELERH-------- 219
           IALL NW+EALVQ SLH  LELN  KT+L FNLWE SYI+ACA+VD+ELERH        
Sbjct: 123 IALLCNWEEALVQTSLHQQLELNSTKTNLHFNLWERSYIEACAVVDQELERHRKIDTFHS 182

Query: 220 ---------------------------------------------------QEAERIAQC 279
                                                              QEAERI QC
Sbjct: 183 GTTALSIVRQGDTIVIANLGDSRAVLATTSNDGNSMLSPIQLTIDFKPNLPQEAERITQC 242

Query: 280 NGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFV 284
           NGRVFCLQDEPGT R+WLPNG+TPGLS+SRSFGDFCVKHFGLISMPDVTQRSVTN+DLFV
Sbjct: 243 NGRVFCLQDEPGTQRLWLPNGKTPGLSISRSFGDFCVKHFGLISMPDVTQRSVTNKDLFV 302

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BLAST of Carg27010-RA vs. NCBI nr
Match: KGN66023.1 (hypothetical protein Csa_1G568520 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 1.9e-95
Identity = 206/368 (55.98%), Postives = 227/368 (61.68%), Query Frame = 0


Query: 39  LEKAMEHLFMKL---------KKWKNSENAS------AAEAMAKSAKKKDLIIRGSGTIH 98
           +E+AM+HLF+K          KKW+NSENAS      +AEAMAKSAKKKDLII GSG+I+
Sbjct: 2   IEQAMKHLFLKFNKLTKSLTPKKWRNSENASVVSGRESAEAMAKSAKKKDLIIHGSGSIN 61

Query: 99  IDGSSNF------------------------------------------------VRESM 158
           IDGSSNF                                                VRESM
Sbjct: 62  IDGSSNFVSSFSKRGEKGINQDCCIVWEEFGCQKDMIFCGVFDGHGPWGHFVAKEVRESM 121

Query: 159 PIALLYNWQEALVQAS-LHSHLELNLAKTHLKFNLWEHSYIQACAMVDRELERH------ 218
           PIALL NW+EALVQ S LH HLELN  KT+L FNLWE SYI+ACA+VD ELERH      
Sbjct: 122 PIALLCNWEEALVQTSLLHPHLELNSTKTNLHFNLWERSYIEACAVVDPELERHPKIDTF 181

Query: 219 -----------------------------------------------------QEAERIA 278
                                                                QEAERI 
Sbjct: 182 HSGTTALSIVRQGETIVIANLGDSRAVLATSSNDGNSMLSPIQLTIDFKPNLPQEAERIT 241

Query: 279 QCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDL 284
           QCNGRVFCLQDEPGT R+WLPNG+ PGLS+SRSFGDFC KHFGLISM DVTQRSVTN+DL
Sbjct: 242 QCNGRVFCLQDEPGTQRLWLPNGKMPGLSISRSFGDFCFKHFGLISMSDVTQRSVTNKDL 301

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BLAST of Carg27010-RA vs. TAIR10
Match: AT5G27930.1 (Protein phosphatase 2C family protein)

HSP 1 Score: 227.3 bits (578), Expect = 1.2e-59
Identity = 126/338 (37.28%), Postives = 179/338 (52.96%), Query Frame = 0


Query: 50  LKKWKNS----ENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF--------------- 109
           +KK KN+    +   AA+ MA  AKKK+LI++ SG +++ GS+N                
Sbjct: 17  IKKVKNNNGNCDAKEAADEMASEAKKKELILKSSGYVNVQGSNNLASLFSKRGEKGVNQD 76

Query: 110 ---------------------------------VRESMPIALLYNWQEALVQASLHSHLE 169
                                            VR SMP++LL NWQ+ L QA+L   L+
Sbjct: 77  CALVWEGFGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLCNWQKILAQATLEPELD 136

Query: 170 LNLAKTHL-KFNLWEHSYIQACAMVDRELERH---------------------------- 229
           L  +   + +F++W+ SY++ CA VD+ELE H                            
Sbjct: 137 LEGSNKKISRFDIWKQSYLKTCATVDQELEHHRKIDSYYSGTTALTIVRQGEVIYVANVG 196

Query: 230 -----------------------------QEAERIAQCNGRVFCLQDEPGTHRIWLPNGE 278
                                        QE ERI  C GRVFCL DEPG HR+W P+ E
Sbjct: 197 DSRAVLAMESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFCLDDEPGVHRVWQPDAE 256

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BLAST of Carg27010-RA vs. TAIR10
Match: AT3G05640.1 (Protein phosphatase 2C family protein)

HSP 1 Score: 219.2 bits (557), Expect = 3.3e-57
Identity = 127/341 (37.24%), Postives = 172/341 (50.44%), Query Frame = 0


Query: 50  LKKWKNSENA-----SAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF-------------- 109
           +KK KN  ++      A + MA+ AKKK+LI+R SG I+ DGS+N               
Sbjct: 17  IKKAKNINSSKSYAKEATDEMAREAKKKELILRSSGCINADGSNNLASVFSRRGEKGVNQ 76

Query: 110 ----------------------------------VRESMPIALLYNWQEALVQASLHSHL 169
                                             VR SMPI+LL NW+E L Q ++    
Sbjct: 77  DCAIVWEGYGCQEDMIFCGIFDGHGPWGHFVSKQVRNSMPISLLCNWKETLSQTTI---- 136

Query: 170 ELNLAKTHLKFNLWEHSYIQACAMVDRELERH---------------------------- 229
                K   +F +W++S+++ C  VD ELE H                            
Sbjct: 137 -AEPDKELQRFAIWKYSFLKTCEAVDLELEHHRKIDSFNSGTTALTIVRQGDVIYIANVG 196

Query: 230 -----------------------------QEAERIAQCNGRVFCLQDEPGTHRIWLPNGE 281
                                        QE ERI  CNGRVFCLQDEPG HR+W P  E
Sbjct: 197 DSRAVLATVSDEGSLVAVQLTVDFKPNLPQEEERIIGCNGRVFCLQDEPGVHRVWQPVDE 256

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BLAST of Carg27010-RA vs. TAIR10
Match: AT3G16800.2 (Protein phosphatase 2C family protein)

HSP 1 Score: 166.0 bits (419), Expect = 3.4e-41
Identity = 73/132 (55.30%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 149 QEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQR 208
           +EAERI Q +GR+FCL DEPG +R+ +PNG + GL++SR+FGD+C+K FGL+S P+VT R
Sbjct: 220 EEAERIKQSDGRLFCLDDEPGVYRVGMPNGGSLGLAVSRAFGDYCLKDFGLVSEPEVTYR 279

Query: 209 SVTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVDREKSARRLVDYATGAWKRRRPGIAAD 268
            +T++D F++LATDG+WDV++N EAV+IV    +R KSA+RLV+ A   W+R+R  IA D
Sbjct: 280 KITDKDQFLILATDGMWDVMTNNEAVEIVRGVKERRKSAKRLVERAVTLWRRKRRSIAMD 339

Query: 269 DMSVIVLFLHSS 281
           D+SV+ LF   S
Sbjct: 340 DISVLCLFFRPS 351

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BLAST of Carg27010-RA vs. TAIR10
Match: AT3G02750.3 (Protein phosphatase 2C family protein)

HSP 1 Score: 158.7 bits (400), Expect = 5.4e-39
Identity = 73/136 (53.68%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 145 LERHQEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPD 204
           +E   EAERI +C GRVF L+DEP   R+WLPN ++PGL+++R+FGDFC+K FGLIS+PD
Sbjct: 296 IELAAEAERIRKCRGRVFALRDEPEVCRVWLPNCDSPGLAMARAFGDFCLKDFGLISVPD 355

Query: 205 VTQRSVTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVDREKSARRLVDYATGAWKRRRPG 264
           V+ R +T +D F+VLATDGIWDV+SN++ V IV S   R  +AR LV+ A  AW+ + P 
Sbjct: 356 VSFRQLTEKDEFIVLATDGIWDVLSNEDVVAIVASAPSRSSAARALVESAVRAWRYKYPT 415

Query: 265 IAADDMSVIVLFLHSS 281
              DD + + L+L SS
Sbjct: 416 SKVDDCAAVCLYLDSS 431

[Close]

BLAST of Carg27010-RA vs. TAIR10
Match: AT5G36250.1 (Protein phosphatase 2C family protein)

HSP 1 Score: 157.9 bits (398), Expect = 9.1e-39
Identity = 71/132 (53.79%), Postives = 95/132 (71.97%), Query Frame = 0


Query: 150 EAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRS 209
           EAERI +C GR+F L+DEPG  R+WLPN  +PGL+++R+FGDFC+K FGLIS+PDV+ R 
Sbjct: 257 EAERIKRCRGRIFALRDEPGVARLWLPNHNSPGLAMARAFGDFCLKDFGLISVPDVSYRR 316

Query: 210 VTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVDREKSARRLVDYATGAWKRRRPGIAADD 269
           +T +D FVVLATDGIWD ++N+E V+IV     R  + R LV+ A   W+ + P    DD
Sbjct: 317 LTEKDEFVVLATDGIWDALTNEEVVKIVAKAPTRSSAGRALVEAAVRNWRWKFPTSKVDD 376

Query: 270 MSVIVLFLHSSP 282
            +V+ LFL S P
Sbjct: 377 CAVVCLFLDSEP 388

[Close]

BLAST of Carg27010-RA vs. Swiss-Prot
Match: sp|Q0WRB2|P2C73_ARATH (Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana OX=3702 GN=PPC6-7 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.2e-58
Identity = 126/338 (37.28%), Postives = 179/338 (52.96%), Query Frame = 0


Query: 50  LKKWKNS----ENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF--------------- 109
           +KK KN+    +   AA+ MA  AKKK+LI++ SG +++ GS+N                
Sbjct: 17  IKKVKNNNGNCDAKEAADEMASEAKKKELILKSSGYVNVQGSNNLASLFSKRGEKGVNQD 76

Query: 110 ---------------------------------VRESMPIALLYNWQEALVQASLHSHLE 169
                                            VR SMP++LL NWQ+ L QA+L   L+
Sbjct: 77  CALVWEGFGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLCNWQKILAQATLEPELD 136

Query: 170 LNLAKTHL-KFNLWEHSYIQACAMVDRELERH---------------------------- 229
           L  +   + +F++W+ SY++ CA VD+ELE H                            
Sbjct: 137 LEGSNKKISRFDIWKQSYLKTCATVDQELEHHRKIDSYYSGTTALTIVRQGEVIYVANVG 196

Query: 230 -----------------------------QEAERIAQCNGRVFCLQDEPGTHRIWLPNGE 278
                                        QE ERI  C GRVFCL DEPG HR+W P+ E
Sbjct: 197 DSRAVLAMESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFCLDDEPGVHRVWQPDAE 256

[Close]

BLAST of Carg27010-RA vs. Swiss-Prot
Match: sp|Q9M9W9|P2C34_ARATH (Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana OX=3702 GN=At3g05640 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.0e-56
Identity = 127/341 (37.24%), Postives = 172/341 (50.44%), Query Frame = 0


Query: 50  LKKWKNSENA-----SAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF-------------- 109
           +KK KN  ++      A + MA+ AKKK+LI+R SG I+ DGS+N               
Sbjct: 17  IKKAKNINSSKSYAKEATDEMAREAKKKELILRSSGCINADGSNNLASVFSRRGEKGVNQ 76

Query: 110 ----------------------------------VRESMPIALLYNWQEALVQASLHSHL 169
                                             VR SMPI+LL NW+E L Q ++    
Sbjct: 77  DCAIVWEGYGCQEDMIFCGIFDGHGPWGHFVSKQVRNSMPISLLCNWKETLSQTTI---- 136

Query: 170 ELNLAKTHLKFNLWEHSYIQACAMVDRELERH---------------------------- 229
                K   +F +W++S+++ C  VD ELE H                            
Sbjct: 137 -AEPDKELQRFAIWKYSFLKTCEAVDLELEHHRKIDSFNSGTTALTIVRQGDVIYIANVG 196

Query: 230 -----------------------------QEAERIAQCNGRVFCLQDEPGTHRIWLPNGE 281
                                        QE ERI  CNGRVFCLQDEPG HR+W P  E
Sbjct: 197 DSRAVLATVSDEGSLVAVQLTVDFKPNLPQEEERIIGCNGRVFCLQDEPGVHRVWQPVDE 256

[Close]

BLAST of Carg27010-RA vs. Swiss-Prot
Match: sp|Q6L482|P2C48_ORYSJ (Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0358500 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-51
Identity = 113/252 (44.84%), Postives = 143/252 (56.75%), Query Frame = 0


Query: 91  VRESMPIALLYNWQEALVQASLHSHLELNLAKTHLKFNLWEHSYIQACAMVDRELE---- 150
           VRES+P ALL  W+EA+  A+L    E  L +   + +LW  SY+ ACA VD EL     
Sbjct: 103 VRESLPPALLRRWREAVTLAALIDGGEKRLCE--CRPDLWRQSYLAACAAVDAELRASRR 162

Query: 151 --------------RH-------------------------------------------Q 210
                         +H                                           Q
Sbjct: 163 LDAVHSGCTALSLVKHGDLLVVANVGDSRAVLATASPDDGGGARLAAVQLTVDFKPNLPQ 222

Query: 211 EAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRS 270
           E ERI +CNGRV CL DEPG HR+W P+ E PGL++SR+FGD+CVK +G+IS P+VT R 
Sbjct: 223 ERERIMECNGRVQCLADEPGVHRVWRPDREGPGLAMSRAFGDYCVKDYGVISAPEVTHRR 282

Query: 271 VTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVDREKSARRLVDYATGAWKRRRPGIAADD 282
           +T QD FV+LATDG+WDVVSN+EAVQIV S  +REK+A+RLV++A  AW+R+R GIA DD
Sbjct: 283 ITAQDHFVILATDGVWDVVSNEEAVQIVASAPEREKAAKRLVEFAVRAWRRKRRGIAVDD 342

[Close]

BLAST of Carg27010-RA vs. Swiss-Prot
Match: sp|Q9LRZ4|P2C41_ARATH (Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana OX=3702 GN=At3g16800 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.1e-40
Identity = 73/132 (55.30%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 149 QEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQR 208
           +EAERI Q +GR+FCL DEPG +R+ +PNG + GL++SR+FGD+C+K FGL+S P+VT R
Sbjct: 220 EEAERIKQSDGRLFCLDDEPGVYRVGMPNGGSLGLAVSRAFGDYCLKDFGLVSEPEVTYR 279

Query: 209 SVTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVDREKSARRLVDYATGAWKRRRPGIAAD 268
            +T++D F++LATDG+WDV++N EAV+IV    +R KSA+RLV+ A   W+R+R  IA D
Sbjct: 280 KITDKDQFLILATDGMWDVMTNNEAVEIVRGVKERRKSAKRLVERAVTLWRRKRRSIAMD 339

Query: 269 DMSVIVLFLHSS 281
           D+SV+ LF   S
Sbjct: 340 DISVLCLFFRPS 351

[Close]

BLAST of Carg27010-RA vs. Swiss-Prot
Match: sp|Q2R637|P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0417400 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.9e-38
Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 141 VDRELERHQEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLI 200
           VD + +  +EA RI +CNGRVF  QDEP   R+WLPN  +PGL+++R+FGDFC+K FGLI
Sbjct: 220 VDLKPDHPREARRIRRCNGRVFAHQDEPDVARLWLPNCNSPGLAMARAFGDFCLKDFGLI 279

Query: 201 SMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVDREKSARRLVDYATGAWKR 260
           S+PDVT R +T +D F+VLATDG+WDV+SNQE V +V S   R  +AR +VD A   W+ 
Sbjct: 280 SVPDVTYRQITEKDEFIVLATDGVWDVLSNQEVVDVVASCSGRFAAARSVVDLANETWRF 339

Query: 261 RRPGIAADDMSVIVLFLH 279
           + P    DD +V+ LFL+
Sbjct: 340 KYPTSKTDDCAVVCLFLN 357

[Close]

BLAST of Carg27010-RA vs. TrEMBL
Match: tr|A0A1S3BNV7|A0A1S3BNV7_CUCME (probable protein phosphatase 2C 34 OS=Cucumis melo OX=3656 GN=LOC103492125 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 8.6e-100
Identity = 211/366 (57.65%), Postives = 230/366 (62.84%), Query Frame = 0


Query: 40  EKAMEHLFMKL---------KKWKNSENAS------AAEAMAKSAKKKDLIIRGSGTIHI 99
           EKAM+HLF K          KKW+NSENAS      AAEAMAKSAKKKDLII GSG+I+I
Sbjct: 3   EKAMKHLFFKFNELTKSITSKKWRNSENASVVSGREAAEAMAKSAKKKDLIIHGSGSINI 62

Query: 100 DGSSNF------------------------------------------------VRESMP 159
           DGSSNF                                                VRESMP
Sbjct: 63  DGSSNFVSSFSKRGEKGINQDCCIVWEEFGCQKDMIFCGVFDGHGPWGHFVAKKVRESMP 122

Query: 160 IALLYNWQEALVQASLHSHLELNLAKTHLKFNLWEHSYIQACAMVDRELERH-------- 219
           IALL NW+EALVQ SLH  LELN  KT+L FNLWE SYI+ACA+VD+ELERH        
Sbjct: 123 IALLCNWEEALVQTSLHQQLELNSTKTNLHFNLWERSYIEACAVVDQELERHRKIDTFHS 182

Query: 220 ---------------------------------------------------QEAERIAQC 279
                                                              QEAERI QC
Sbjct: 183 GTTALSIVRQGDTIVIANLGDSRAVLATTSNDGNSMLSPIQLTIDFKPNLPQEAERITQC 242

Query: 280 NGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFV 284
           NGRVFCLQDEPGT R+WLPNG+TPGLS+SRSFGDFCVKHFGLISMPDVTQRSVTN+DLFV
Sbjct: 243 NGRVFCLQDEPGTQRLWLPNGKTPGLSISRSFGDFCVKHFGLISMPDVTQRSVTNKDLFV 302

[Close]

BLAST of Carg27010-RA vs. TrEMBL
Match: tr|A0A0A0LWB3|A0A0A0LWB3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568520 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.3e-95
Identity = 206/368 (55.98%), Postives = 227/368 (61.68%), Query Frame = 0


Query: 39  LEKAMEHLFMKL---------KKWKNSENAS------AAEAMAKSAKKKDLIIRGSGTIH 98
           +E+AM+HLF+K          KKW+NSENAS      +AEAMAKSAKKKDLII GSG+I+
Sbjct: 2   IEQAMKHLFLKFNKLTKSLTPKKWRNSENASVVSGRESAEAMAKSAKKKDLIIHGSGSIN 61

Query: 99  IDGSSNF------------------------------------------------VRESM 158
           IDGSSNF                                                VRESM
Sbjct: 62  IDGSSNFVSSFSKRGEKGINQDCCIVWEEFGCQKDMIFCGVFDGHGPWGHFVAKEVRESM 121

Query: 159 PIALLYNWQEALVQAS-LHSHLELNLAKTHLKFNLWEHSYIQACAMVDRELERH------ 218
           PIALL NW+EALVQ S LH HLELN  KT+L FNLWE SYI+ACA+VD ELERH      
Sbjct: 122 PIALLCNWEEALVQTSLLHPHLELNSTKTNLHFNLWERSYIEACAVVDPELERHPKIDTF 181

Query: 219 -----------------------------------------------------QEAERIA 278
                                                                QEAERI 
Sbjct: 182 HSGTTALSIVRQGETIVIANLGDSRAVLATSSNDGNSMLSPIQLTIDFKPNLPQEAERIT 241

Query: 279 QCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDL 284
           QCNGRVFCLQDEPGT R+WLPNG+ PGLS+SRSFGDFC KHFGLISM DVTQRSVTN+DL
Sbjct: 242 QCNGRVFCLQDEPGTQRLWLPNGKMPGLSISRSFGDFCFKHFGLISMSDVTQRSVTNKDL 301

[Close]

BLAST of Carg27010-RA vs. TrEMBL
Match: tr|A0A2K1XZ88|A0A2K1XZ88_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G012200v3 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.0e-73
Identity = 146/298 (48.99%), Postives = 185/298 (62.08%), Query Frame = 0


Query: 49  KLKKWKNSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF------------------ 108
           K+K   N +   AAEAMAK AKK ++I+R SG +++DGS NF                  
Sbjct: 19  KVKSNGNGDGREAAEAMAKDAKKNEMILRSSGCVNVDGSKNFASVFSRRGEKGVNQDCCI 78

Query: 109 ------------------------------VRESMPIALLYNWQEALVQASLHSHLELNL 168
                                         VRESM  +LL NWQE L Q SL   ++L  
Sbjct: 79  VWEEFGCQADMTFCGIFDGHGQWGHFVAKKVRESMATSLLCNWQETLAQCSLDPDIDLES 138

Query: 169 AKTHLKFNLWEHSYIQACAMVDRELERH-----------------QEAERIAQCNGRVFC 228
            K H +FN+W+HSY++ CA VD+ELE+H                 QE ERI QC GRVFC
Sbjct: 139 DKKHQRFNMWKHSYLKTCAAVDQELEQHRKIDSFYSGTTALTIVRQETERILQCRGRVFC 198

Query: 229 LQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDG 282
           L DEPG HR+W P+ E+PGL++SR+FGD+CVK+FGLIS+P+VTQR +T++D FV+LATDG
Sbjct: 199 LDDEPGVHRVWQPDAESPGLAMSRAFGDYCVKNFGLISVPEVTQRHLTSEDQFVILATDG 258

[Close]

BLAST of Carg27010-RA vs. TrEMBL
Match: tr|A0A1U8KTN4|A0A1U8KTN4_GOSHI (probable protein phosphatase 2C 73 OS=Gossypium hirsutum OX=3635 GN=LOC107920566 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.7e-69
Identity = 146/333 (43.84%), Postives = 186/333 (55.86%), Query Frame = 0


Query: 55  NSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF------------------------ 114
           N +   AAEAMAK AKK DLI+R SG++++DGS+N                         
Sbjct: 26  NGDGKEAAEAMAKDAKKNDLILRSSGSVNVDGSNNLASVFSKRGRKGVNQDCAIVWEEFG 85

Query: 115 ------------------------VRESMPIALLYNWQEALVQASLHSHLELNLAKTHLK 174
                                   VRESMP +LL NWQE L QASL   ++L   K H +
Sbjct: 86  CQADMLFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAQASLDPEIDLESDKKHQR 145

Query: 175 FNLWEHSYIQACAMVDRELERH-------------------------------------- 234
           F++W+HSY++ CA VD ELE+H                                      
Sbjct: 146 FHIWKHSYLRTCAAVDHELEQHRKIDSFYSGTTALTIVRQGDLIYVANIGDSRAVLATTS 205

Query: 235 -------------------QEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSF 283
                              QEAERI QC GRVFCL DEPG HR+WLP+ E+PGL++SR+F
Sbjct: 206 DDGNLVPVQLTVDFKPNLPQEAERIVQCKGRVFCLHDEPGVHRVWLPDEESPGLAMSRAF 265

[Close]

BLAST of Carg27010-RA vs. TrEMBL
Match: tr|A0A1U8PCZ9|A0A1U8PCZ9_GOSHI (probable protein phosphatase 2C 73 OS=Gossypium hirsutum OX=3635 GN=LOC107957223 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.7e-69
Identity = 146/333 (43.84%), Postives = 187/333 (56.16%), Query Frame = 0


Query: 55  NSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNF------------------------ 114
           N +   AAEAMAK+AKK  LI+R SG++++DGS+N                         
Sbjct: 26  NGDGREAAEAMAKNAKKNYLILRSSGSVNVDGSNNLASVFSKRGRKGVNQDCAIVWEEFG 85

Query: 115 ------------------------VRESMPIALLYNWQEALVQASLHSHLELNLAKTHLK 174
                                   VRESMP +LL NWQE L QASL   ++L   K H +
Sbjct: 86  CQADMLFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAQASLDPEIDLESDKKHQR 145

Query: 175 FNLWEHSYIQACAMVDRELERH-------------------------------------- 234
           F++W+HSY++ CA VD ELE+H                                      
Sbjct: 146 FHIWKHSYLRTCAAVDHELEQHRKIDSFYSGTTALTIVRQGDLIYVANIGDSRAVLATTS 205

Query: 235 -------------------QEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSF 283
                              QEAERI QC GRVFCL DEPG HR+WLP+ E+PGL++SR+F
Sbjct: 206 DDGNLVPVQLTIDFRPNLPQEAERIVQCKGRVFCLHDEPGVHRVWLPDEESPGLAMSRAF 265

The following BLAST results are available for this feature:

BLAST of Carg27010-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961500.1	4.6e-121	69.34	probable protein phosphatase 2C 73 [Cucurbita moschata]	[more]
XP_023516780.1	6.2e-118	67.62	probable protein phosphatase 2C 73 [Cucurbita pepo subsp. pepo]	[more]
XP_022968748.1	1.5e-100	60.23	probable protein phosphatase 2C 73 [Cucurbita maxima]	[more]
XP_008450566.1	1.3e-99	57.65	PREDICTED: probable protein phosphatase 2C 34 [Cucumis melo]	[more]
KGN66023.1	1.9e-95	55.98	hypothetical protein Csa_1G568520 [Cucumis sativus]	[more]

BLAST of Carg27010-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27930.1	1.2e-59	37.28	Protein phosphatase 2C family protein	[more]
AT3G05640.1	3.3e-57	37.24	Protein phosphatase 2C family protein	[more]
AT3G16800.2	3.4e-41	55.30	Protein phosphatase 2C family protein	[more]
AT3G02750.3	5.4e-39	53.68	Protein phosphatase 2C family protein	[more]
AT5G36250.1	9.1e-39	53.79	Protein phosphatase 2C family protein	[more]

BLAST of Carg27010-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0WRB2\|P2C73_ARATH	2.2e-58	37.28	Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana OX=3702 GN=PPC6-7 PE=...	[more]
sp\|Q9M9W9\|P2C34_ARATH	6.0e-56	37.24	Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana OX=3702 GN=At3g05640 ...	[more]
sp\|Q6L482\|P2C48_ORYSJ	1.2e-51	44.84	Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]
sp\|Q9LRZ4\|P2C41_ARATH	6.1e-40	55.30	Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana OX=3702 GN=At3g16800 ...	[more]
sp\|Q2R637\|P2C75_ORYSJ	1.9e-38	53.62	Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]

BLAST of Carg27010-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BNV7\|A0A1S3BNV7_CUCME	8.6e-100	57.65	probable protein phosphatase 2C 34 OS=Cucumis melo OX=3656 GN=LOC103492125 PE=4 ...	[more]
tr\|A0A0A0LWB3\|A0A0A0LWB3_CUCSA	1.3e-95	55.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568520 PE=4 SV=1	[more]
tr\|A0A2K1XZ88\|A0A2K1XZ88_POPTR	9.0e-73	48.99	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G012200v3 PE=...	[more]
tr\|A0A1U8KTN4\|A0A1U8KTN4_GOSHI	2.7e-69	43.84	probable protein phosphatase 2C 73 OS=Gossypium hirsutum OX=3635 GN=LOC107920566...	[more]
tr\|A0A1U8PCZ9\|A0A1U8PCZ9_GOSHI	2.7e-69	43.84	probable protein phosphatase 2C 73 OS=Gossypium hirsutum OX=3635 GN=LOC107957223...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006470	protein dephosphorylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0004722	protein serine/threonine phosphatase activity
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR015655	PP2C
IPR036457	PPM-type_dom_sf
IPR001932	PPM-type_phosphatase_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004722	protein serine/threonine phosphatase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg27010	Carg27010	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg27010-RA	Carg27010-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27010-RA.three_prime_UTR.1	Carg27010-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27010-RA.CDS.5	Carg27010-RA.CDS.5	CDS
Carg27010-RA.CDS.4	Carg27010-RA.CDS.4	CDS
Carg27010-RA.CDS.3	Carg27010-RA.CDS.3	CDS
Carg27010-RA.CDS.2	Carg27010-RA.CDS.2	CDS
Carg27010-RA.CDS.1	Carg27010-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27010-RA.exon.5	Carg27010-RA.exon.5	exon
Carg27010-RA.exon.4	Carg27010-RA.exon.4	exon
Carg27010-RA.exon.3	Carg27010-RA.exon.3	exon
Carg27010-RA.exon.2	Carg27010-RA.exon.2	exon
Carg27010-RA.exon.1	Carg27010-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001932	PPM-type phosphatase domain	SMART	SM00332	PP2C_4	coord: 1..275 e-value: 2.4E-10 score: 50.4
IPR001932	PPM-type phosphatase domain	PFAM	PF00481	PP2C	coord: 142..254 e-value: 2.5E-22 score: 79.7
IPR001932	PPM-type phosphatase domain	PROSITE	PS51746	PPM_2	coord: 1..277 score: 23.079
IPR001932	PPM-type phosphatase domain	CDD	cd00143	PP2Cc	coord: 141..277 e-value: 7.45541E-32 score: 118.583
IPR036457	PPM-type phosphatase domain superfamily	GENE3D	G3DSA:3.60.40.10		coord: 137..280 e-value: 1.8E-36 score: 128.0
IPR036457	PPM-type phosphatase domain superfamily	SUPERFAMILY	SSF81606	PP2C-like	coord: 140..278
IPR015655	Protein phosphatase 2C family	PANTHER	PTHR13832	PROTEIN PHOSPHATASE 2C	coord: 149..281
IPR015655	Protein phosphatase 2C family	PANTHER	PTHR13832	PROTEIN PHOSPHATASE 2C	coord: 49..90
IPR015655	Protein phosphatase 2C family	PANTHER	PTHR13832	PROTEIN PHOSPHATASE 2C	coord: 91..149
None	No IPR available	PANTHER	PTHR13832:SF514	SUBFAMILY NOT NAMED	coord: 149..281 coord: 91..149
None	No IPR available	PANTHER	PTHR13832:SF514	SUBFAMILY NOT NAMED	coord: 49..90