Carg25905-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTATGCACCGCGTTTGTGGACCTATACCGGCTAAGAGAGCGGGGCGCGGGGGTTGAGACCTATAACTGACGATTGACTTTCCCGCCGAAGAGGCCGTGGGTGGCGTAGGGAATGGCCCTAAAATATTGTTAAAAAATTAAGCCGATGGACGGGATTCGAAAAGGAAGGGTGTAGGAAGGGCATACTACGCGGGGCTTTTTATTAATGGTCCCGAGAGAGACCTATAAATGTAAACAAAATTTGACCCTACAGAGAAGGTCATTATGAGTACGACAAGGGTTATTTAGAGACATAAGGAGTTGGGAGAAGGCGAGAATTGGACGTATCCGGCCGCCCAGTTAAAACATGAAATGGTTTAGACCTGACCATGAGCCGAAAGATGATATAGGGGTTACCAGAAGATTTTGGGTGGGGTGGAAAAATGAAATAGATTTCAATGTGTATGTACTCCATCGTAGAGTCAAATTGAGATCAAGAAGTTAATTTGGTAGCGAATGATTGGTGCAATTTGCTTTTCCACAATAAGTATATTACACATCTTAAATAATAAACAAGATCACTAAGTATGTATAAAGGAGTCGTCAAATAGTAGCTGGTTGTGGAATTTTTTTAATAATAAATATTGATAATTAAAATAAATACTTAATACCCATCAAACATGAGACAAATGTCAAATAATATATATAAATCTTTTTATGTTAATATTAGATTCTTCGGAACTAATCGGTAGAGAAATCATTATATAGGGATAATTATGTGAACTAATCTGGAGCCTACACAAACAATAGTACACCTTTATTTAATTAATAAGTGTATATAAAGCATTAGATGATAGGTCTGCCGAACACTCGACGCGATATTTAAGAATATGGCATAGATTTAAACTAATTTAAGATTGTTCCTTCTTCCCACCATTCACCAATTCAAAAAGCTTAATGAAATTCTTCAACACTCTACATTAAGAACCCAATCTTCTTACTTTTTGCATGGAGTGGATGCTTCCTTCTTCTGGATCAAGTGGCTACCCGAGTACCAGAATCGACTTAAACCGGCGAGTTCACACCCCGACGGGACCTCATACCCGCGTCGTAATGCTCCTTTACAAACATTCTACATAACCTAGGCATCTTAGTCACACCAATTCGTCTCCCTAAAACCTACTTGTCACTTCTCTCAACATCGCATGACTAACAATTATCTAGCCTAGTGAAAGATCATCTCTCGGAGTCAAAACCTGCTCGGCATGGAAAAATCCCGCAGCTCTGCTTCGATGCAATCTCCCGCTCTTCTCCGAATTCTACACAACGCCTAGCTTACCTAACCGTCGGCCAACCTCAGGGCTTCACCCAGATCGAACAGTACGCGCATCTCCAGACAACGGCTGCAGCAATCGAGGGGAGGCGTCGCACGAGTGTCCACTCGCTAGGTATATGAGCCTACCGAGGGTGTAAGACGGATCTAACAGCCTGGAGGCCTCCTCTCTATGAAAGTGTATTATGCATTGTTACATTGTACGGTGAGAATATCACATCGGAAGCTTCTTATCTCAAACAGGTCGCACTCTCTTACCGGATTACTGGACAATGACAGTATGGTTCCATTTTTCCTGAAATTGGGGGTTGTTGGGTGTGTGGATAGGTGTACAAGATAGAAGGGTGTTCTCCACTCCAATGTAGGACCATGTTGATGGCGTGTTGTTGTTTGACTGGTTCTGCATATCTTCTATTCTCTCGTGGATTTGCTGCAGCGCTTCATGTGGGAATTCTCTTGGCAGTCTGTTTATCAGTTTTGCTACTCAATCGAGGATACTTCTCTCCCTCTTTTCTACTGGTTCCTTATTTCTTCTTAATTCTTCGTAACCTCCCACTCTCCCACCAATATTTCGATACTCTCTCTTTCCTACTTCATTTTTGGGTATCAGGTTGATTCCTTACTCTCACCTAAAGGCCAAAAGTATTCAATTCACAAATTAATGTTGGTAAAAAATTTATCGTTAAACGCGGTCTATACTTGTCCATCCCGTTCATATCACGTGGGTGACAGCTCAGCCGCAGGAATACTTCATAATTTGTGCATTCCCGCGGGTAGGAAAGAAGCGGAGAATATGTGATCACACTGAATGGTCACACACTGAAGAACAATTATAAAGCCACAGACGAGAATTACTGTCCTGAATGCATCTTTATACCACCGGAAAGTTAGCACTCTGCCGTAACTAGCACAAACAACGCTGGGGACGGGGTTGATGGTTTGAATTAAGGAGTGAGGTTTCAACTGGCACGGCGTGTGAATTTCGAGCTCCTTCGTCTAGCAAGGGAGGCCCGTGCGTGCGGCCGTCAGGAATTTTGATCAGCTGTGGCGCTCTAGACAGTGATTGCGAAGCATTGGATCGCTAGAGTATTGGCCTATTTGAATTCGCTTGTTGGCAGTTAGTTGAAGGATGAAGGATGCATAAGACTGCTCCCTGAATTGCTGGCGGCTCAAGGGGCCTGTTCCTTGGTTCCTGGTTCAGAGCTCTACTGGATTCCAGTTCTTTAGAATTGAAGGAGAAGGCTGTTGCTGCTATTTCCATTATTTCTACGGTGGATGGCGTTAAGAATGTAATGATTGCTGAAGGAATCGTGCTTTTGAATCACTTGCTGAGGATTCTCGATTCTGGTAGCGGTTTTGCAAAAGAGAAGTCCTGTTTAGCTCTCCAATCTCTGAGTATTTCCAAGCAAAATGCTAGGTCAATCGGTTCCAGAGGAGGGATTTCATCTCTGTTGGAGATTTGTGAGGCCGGAACTCCCGGTTCTCAAGCCTCTGCAGCTGCGGTTTTGAGAAATCTTGCATCATTTAACGAAATCAAAGAGAATTTCATCGAAGAAAATGGGGTTATAGTTCTTTTGGGGCTTTTGACCTCTGGAACTCCATTGGCTCAAGAAAATGCAATTGGTTGTTTGTGTAATTTAGTTGGAGATGATGATAATTTGAAGCTCTTGATCGTTAAAGAAGGTGGGATCGAGTTCTTGAAAATTTTCTGGGATTCGGTTCCATCAGTTCGTAGTCTTGAAGTGGCTGTGGAGCTTTTGAGCCTCTTGGCTTCTTGCTCCCCCATTGCAGAAACTCTCATTTCAGAGGGATTTCTTGATCGGCTTCTTCCAGTTTTGAGTTGCGGAGTATTAGGTGCGCGAATTGCAGCAGCTCGAGCAGTTCACGAGCTCAGCTTCTGTGCAAAAGCAAGAAAAGAAATGGGGGAATCTGGATTCATCACTCCCTTAATTAATATGTTGGATGGTAAATCTGTTGATGAGAAAACAGCAGCTGCTAAGGCGTTGTCTTCTCTATTACAATATAATGGTAACAGAAGAATTTTCCAGAAAGAGGAGAGGGGAATTGTAAGTGCAGTTCATCTCTTAGATCCTTCAATCTTGAATCTGGATAAGAAGTACCCTGTTTCATTATTAGCCTCGGTTGTGATTTCAAGCAAGTGTAGAAAGCTGATGGCTGCTGCTGGTGCTGCTTCGTATCTACAAAAGCTTGTTGAAATGAATGTTGAGGGGTCAAAGAAGCTGTTGGTAAGTCTTAGCCGTGCTAAAATCTGGGGTGTCTTTGCCAGATCTTAG ATGATGCCTAGTGAAAGATCATCTCTCGGAGTCAAAACCTGCTCGGCATGGAAAAATCCCGCAGCTCTGCTTCGATGCAATCTCCCGCTCTTCTCCGAATTCTACACAACGCCTAGCTTACCTAACCGTCGGCCAACCTCAGGGCTTCACCCAGATCGAACAGTACGCGCATCTCCAGACAACGGCTGCAGCAATCGAGGGGAGGCGTCGCACGAGTGTCCACTCGCTAGAGCTCTACTGGATTCCAGTTCTTTAGAATTGAAGGAGAAGGCTGTTGCTGCTATTTCCATTATTTCTACGGTGGATGGCGTTAAGAATGTAATGATTGCTGAAGGAATCGTGCTTTTGAATCACTTGCTGAGGATTCTCGATTCTGGTAGCGGTTTTGCAAAAGAGAAGTCCTGTTTAGCTCTCCAATCTCTGAGTATTTCCAAGCAAAATGCTAGGTCAATCGGTTCCAGAGGAGGGATTTCATCTCTGTTGGAGATTTGTGAGGCCGGAACTCCCGGTTCTCAAGCCTCTGCAGCTGCGGTTTTGAGAAATCTTGCATCATTTAACGAAATCAAAGAGAATTTCATCGAAGAAAATGGGGTTATAGTTCTTTTGGGGCTTTTGACCTCTGGAACTCCATTGGCTCAAGAAAATGCAATTGGTTGTTTGTGTAATTTAGTTGGAGATGATGATAATTTGAAGCTCTTGATCGTTAAAGAAGGTGGGATCGAGTTCTTGAAAATTTTCTGGGATTCGGTTCCATCAGTTCGTAGTCTTGAAGTGGCTGTGGAGCTTTTGAGCCTCTTGGCTTCTTGCTCCCCCATTGCAGAAACTCTCATTTCAGAGGGATTTCTTGATCGGCTTCTTCCAGTTTTGAGTTGCGGAGTATTAGGTGCGCGAATTGCAGCAGCTCGAGCAGTTCACGAGCTCAGCTTCTGTGCAAAAGCAAGAAAAGAAATGGGGGAATCTGGATTCATCACTCCCTTAATTAATATGTTGGATGGTAAATCTGTTGATGAGAAAACAGCAGCTGCTAAGGCGTTGTCTTCTCTATTACAATATAATGGTAACAGAAGAATTTTCCAGAAAGAGGAGAGGGGAATTGTAAGTGCAGTTCATCTCTTAGATCCTTCAATCTTGAATCTGGATAAGAAGTACCCTGTTTCATTATTAGCCTCGGTTGTGATTTCAAGCAAGTGTAGAAAGCTGATGGCTGCTGCTGGTGCTGCTTCGTATCTACAAAAGCTTGTTGAAATGAATGTTGAGGGGTCAAAGAAGCTGTTGGTAAGTCTTAGCCGTGCTAAAATCTGGGGTGTCTTTGCCAGATCTTAG ATGATGCCTAGTGAAAGATCATCTCTCGGAGTCAAAACCTGCTCGGCATGGAAAAATCCCGCAGCTCTGCTTCGATGCAATCTCCCGCTCTTCTCCGAATTCTACACAACGCCTAGCTTACCTAACCGTCGGCCAACCTCAGGGCTTCACCCAGATCGAACAGTACGCGCATCTCCAGACAACGGCTGCAGCAATCGAGGGGAGGCGTCGCACGAGTGTCCACTCGCTAGAGCTCTACTGGATTCCAGTTCTTTAGAATTGAAGGAGAAGGCTGTTGCTGCTATTTCCATTATTTCTACGGTGGATGGCGTTAAGAATGTAATGATTGCTGAAGGAATCGTGCTTTTGAATCACTTGCTGAGGATTCTCGATTCTGGTAGCGGTTTTGCAAAAGAGAAGTCCTGTTTAGCTCTCCAATCTCTGAGTATTTCCAAGCAAAATGCTAGGTCAATCGGTTCCAGAGGAGGGATTTCATCTCTGTTGGAGATTTGTGAGGCCGGAACTCCCGGTTCTCAAGCCTCTGCAGCTGCGGTTTTGAGAAATCTTGCATCATTTAACGAAATCAAAGAGAATTTCATCGAAGAAAATGGGGTTATAGTTCTTTTGGGGCTTTTGACCTCTGGAACTCCATTGGCTCAAGAAAATGCAATTGGTTGTTTGTGTAATTTAGTTGGAGATGATGATAATTTGAAGCTCTTGATCGTTAAAGAAGGTGGGATCGAGTTCTTGAAAATTTTCTGGGATTCGGTTCCATCAGTTCGTAGTCTTGAAGTGGCTGTGGAGCTTTTGAGCCTCTTGGCTTCTTGCTCCCCCATTGCAGAAACTCTCATTTCAGAGGGATTTCTTGATCGGCTTCTTCCAGTTTTGAGTTGCGGAGTATTAGGTGCGCGAATTGCAGCAGCTCGAGCAGTTCACGAGCTCAGCTTCTGTGCAAAAGCAAGAAAAGAAATGGGGGAATCTGGATTCATCACTCCCTTAATTAATATGTTGGATGGTAAATCTGTTGATGAGAAAACAGCAGCTGCTAAGGCGTTGTCTTCTCTATTACAATATAATGGTAACAGAAGAATTTTCCAGAAAGAGGAGAGGGGAATTGTAAGTGCAGTTCATCTCTTAGATCCTTCAATCTTGAATCTGGATAAGAAGTACCCTGTTTCATTATTAGCCTCGGTTGTGATTTCAAGCAAGTGTAGAAAGCTGATGGCTGCTGCTGGTGCTGCTTCGTATCTACAAAAGCTTGTTGAAATGAATGTTGAGGGGTCAAAGAAGCTGTTGGTAAGTCTTAGCCGTGCTAAAATCTGGGGTGTCTTTGCCAGATCTTAG MMPSERSSLGVKTCSAWKNPAALLRCNLPLFSEFYTTPSLPNRRPTSGLHPDRTVRASPDNGCSNRGEASHECPLARALLDSSSLELKEKAVAAISIISTVDGVKNVMIAEGIVLLNHLLRILDSGSGFAKEKSCLALQSLSISKQNARSIGSRGGISSLLEICEAGTPGSQASAAAVLRNLASFNEIKENFIEENGVIVLLGLLTSGTPLAQENAIGCLCNLVGDDDNLKLLIVKEGGIEFLKIFWDSVPSVRSLEVAVELLSLLASCSPIAETLISEGFLDRLLPVLSCGVLGARIAAARAVHELSFCAKARKEMGESGFITPLINMLDGKSVDEKTAAAKALSSLLQYNGNRRIFQKEERGIVSAVHLLDPSILNLDKKYPVSLLASVVISSKCRKLMAAAGAASYLQKLVEMNVEGSKKLLVSLSRAKIWGVFARS
BLAST of Carg25905-RA vs. NCBI nr
Match: XP_022994373.1 (vacuolar protein 8 [Cucurbita maxima]) HSP 1 Score: 387.5 bits (994), Expect = 6.1e-104 Identity = 313/367 (85.29%), Postives = 331/367 (90.19%), Query Frame = 0
BLAST of Carg25905-RA vs. NCBI nr
Match: XP_022955254.1 (vacuolar protein 8 [Cucurbita moschata]) HSP 1 Score: 385.6 bits (989), Expect = 2.3e-103 Identity = 313/367 (85.29%), Postives = 331/367 (90.19%), Query Frame = 0
BLAST of Carg25905-RA vs. NCBI nr
Match: XP_023542631.1 (vacuolar protein 8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382.9 bits (982), Expect = 1.5e-102 Identity = 310/367 (84.47%), Postives = 331/367 (90.19%), Query Frame = 0
BLAST of Carg25905-RA vs. NCBI nr
Match: XP_022927003.1 (vacuolar protein 8-like [Cucurbita moschata]) HSP 1 Score: 374.8 bits (961), Expect = 4.1e-100 Identity = 326/367 (88.83%), Postives = 329/367 (89.65%), Query Frame = 0
BLAST of Carg25905-RA vs. NCBI nr
Match: XP_023519178.1 (vacuolar protein 8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 366.7 bits (940), Expect = 1.1e-97 Identity = 323/367 (88.01%), Postives = 327/367 (89.10%), Query Frame = 0
BLAST of Carg25905-RA vs. TAIR10
Match: AT5G50900.1 (ARM repeat superfamily protein) HSP 1 Score: 223.0 bits (567), Expect = 3.6e-58 Identity = 118/188 (62.77%), Postives = 145/188 (77.13%), Query Frame = 0
BLAST of Carg25905-RA vs. TAIR10
Match: AT2G45720.1 (ARM repeat superfamily protein) HSP 1 Score: 80.9 bits (198), Expect = 2.2e-15 Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 0
BLAST of Carg25905-RA vs. TAIR10
Match: AT1G61350.1 (ARM repeat superfamily protein) HSP 1 Score: 68.9 bits (167), Expect = 8.7e-12 Identity = 55/186 (29.57%), Postives = 97/186 (52.15%), Query Frame = 0
BLAST of Carg25905-RA vs. TAIR10
Match: AT2G05810.1 (ARM repeat superfamily protein) HSP 1 Score: 51.2 bits (121), Expect = 1.9e-06 Identity = 34/111 (30.63%), Postives = 60/111 (54.05%), Query Frame = 0
BLAST of Carg25905-RA vs. TrEMBL
Match: tr|A0A0A0M0M7|A0A0A0M0M7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699580 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 9.6e-98 Identity = 291/367 (79.29%), Postives = 307/367 (83.65%), Query Frame = 0
BLAST of Carg25905-RA vs. TrEMBL
Match: tr|A0A1S3C8N4|A0A1S3C8N4_CUCME (vacuolar protein 8 OS=Cucumis melo OX=3656 GN=LOC103498236 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97 Identity = 289/367 (78.75%), Postives = 305/367 (83.11%), Query Frame = 0
BLAST of Carg25905-RA vs. TrEMBL
Match: tr|V4SQW3|V4SQW3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10031112mg PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 2.1e-81 Identity = 183/366 (50.00%), Postives = 229/366 (62.57%), Query Frame = 0
BLAST of Carg25905-RA vs. TrEMBL
Match: tr|A0A2I4FY53|A0A2I4FY53_9ROSI (uncharacterized protein LOC109003062 OS=Juglans regia OX=51240 GN=LOC109003062 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 6.2e-81 Identity = 215/365 (58.90%), Postives = 261/365 (71.51%), Query Frame = 0
BLAST of Carg25905-RA vs. TrEMBL
Match: tr|A0A2C9VRQ1|A0A2C9VRQ1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G124800 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 6.2e-81 Identity = 188/366 (51.37%), Postives = 224/366 (61.20%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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