Carg22773-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTCTTTTCATTCTTTACTCTCCTGCTTTTCCTTTCCGGTTTGGTAACTTACGGAGGCCTCTCGTTTCTCTCAAAATCCTTCCTTATTACTCTAGATTTCGTCTTCTCAAATCATGTTTGAGCCCCAACATTTCGTCGATTTGCAAGATAACAATGCTTTCGCCGATAATAAATCATGGCTTTCCGGCGACCACAACTCGTCCCCGACTCCGCTCCTCAGTCTCTCTTCACTCTCCAATGCATCGATTTCAACTTCGGCAACTACTGCTGATGGCGCTAATGGAAATGTTGATCGCGAACTCTACAACAATCTCGTCGAGATGGTGCCTCTCGTCCAGTCTCTCATTGTAATCCCTCTATTTTGAACTCTCTTTCACTGTTTAGATGCAGGGGAATGATGGGGTTTGTCTGAATTTTGTTATGGTGGCACTACATGGGGCTGCGGGGTAGTTTCCCGAGTCTCGTGATCGACGGAAATTCGATTTTTGAAATCGTACTATTTTTAGGTTTGTATAAATTCTACTCACGGGGTGCGAAAGGCTGGAGTTGTTTATTTTCAGAAATGGGAACCGGGGGATTGTTAGTAAAGAAATTAATTCACCCACTCCATATTTCTGTGTTTGGGGAAGGCGTCGTCATGGTTGAAAACGTAATTCGGTCGTGTTGTTTTGTGATTTCTTGTCAATTTCGAAGTTCTTCGTTCCGTCTCTCTCTCTCTCTTTTATTTTTATTTATTTATTTATGTTTGTTGATTATGGGTTTTTGTTTTGGTTTAGGATCGGAAAGCGAGCAGTTCATTCTCGAAGCGGGGTTCCATGATTTACACGAAGACGCCTTCTAGAGAATCATTGCACAGGAAAGTTAGTATTTTTTACTCTTACGTGATTTGGTCTTCTTCTATACACTTATTCTCTGATTTTAGGAATTCAAGGGGTAGGAGTTTACTGAATTATCTGTGTCATATTCTGTTAATTTAACCGCAGAGCTCCATGACTTCCCAATTTCTTCTCATTTTGTTGCTAAGCCTATTGTCATTTTGTTTTCCTTATTCGATGAGTTTTAAACTCCTTTTGTGTGTATTTTGAAAATTGAACAGAAAGGTAGGAATATTGGCCATTCTGTTCCGACCAAGAATAAAAAAGATCATGGCGACAAGGACCAAGGTCGCGACGTTGATAATAATCCAGATGCTGATGCCTTTGCAGTGTTGTCCTCAAGTTCTTTGGCCTCTGAAAGAGACAACGAAGAGCTAACCACATTGAGAGAACAATTGGAGGATCTGCAAAAGAAATTGCTTGAAAAGGATGAACTTCTAAAATCAGCAGAGATGTCAAATGACCAGATGAACAGTGTTTATGCAAAGCTTGATGCTTTGAATCTCCAGTCTGCAGAGAAGGATTCTATGATGAAGTCTATTCATTCCCAACTTTCAGATGCAAAGGTTCCTATAAAATTGCATTTTATTTTAGATGGGTTTGTTTTGTTGAGGTCAAATATAGGTATCATGAGTAAGCAAGTTGATTGACGAATCCCTTTTGCAGTTTTCTGTTTGTAAATATTCTGGTTATGTTTCGAAGATGGATGGCTAACAACTGTTTAAATCATTACACTATGTAGATTAAGCTTGCTGATAAGCAAGCTGCCTTGGAGAAGATGCAATGGGAGGTAATGACATCGAATTCAAAAATAGAAGAACTTCAAGAAGAGCTAATGTCCTCGCAAGGAGACGTTTCATCGTTTATGCTGTTACTTGAGGGCTTGATGGAGAATGATTGCAATGAAGGCATGGAAGATTATAGTCTTTCGTTGCATCTCCCGGAGAGCTGCCCTTATATTGTAAGCACATTATGATATGCTTTTCTATATGAGTTTGTAACAGTCTGTTTTATGATATTACAGTACAAGTTGTGACACAATCAGCCGTACGTTTTATTTATTGGAAAAATTATCATGCTCATACTGTTTCTTTTAAACTCTTCAGTGTTTGCTCCTCATTGTTGCCCTTGAACAACGAAAGCTATTTCTTTTGTCCTGCAGGATGATATGGACGACCTGGAAATGCAGAAAATGGAAGAAGCAAGCCAAGCATATGTAGCTGCTGTTGCTGCTGCAAAGGCAAGGCAAGATGAAGAATCTATTGCTGCTGCTGCAACTGCAAGATCATGTCTTCAGTCATTCGTTTTCAGGACTTAAGTTTCAGACGTTTATTGGAATGATCAAATCAATCGCGCTCGCTGCATTCAGCATTCAAATGGTATCAATTGGCATTTCAGCATTCATATGGTATCAACTGGCATTTCAACATTCATATGGTATTCTTCATGGGGGGTTACTCAAGTTATTTATTTGTAATCATTTGTGGAATATGAAAAAGGGAACATTTGTTTCATTTTGTATGTATGATGTATCTAACCTTCCCCATATCT AATTTCTTTTCATTCTTTACTCTCCTGCTTTTCCTTTCCGGTTTGGTAACTTACGGAGGCCTCTCGTTTCTCTCAAAATCCTTCCTTATTACTCTAGATTTCGTCTTCTCAAATCATGTTTGAGCCCCAACATTTCGTCGATTTGCAAGATAACAATGCTTTCGCCGATAATAAATCATGGCTTTCCGGCGACCACAACTCGTCCCCGACTCCGCTCCTCAGTCTCTCTTCACTCTCCAATGCATCGATTTCAACTTCGGCAACTACTGCTGATGGCGCTAATGGAAATGTTGATCGCGAACTCTACAACAATCTCGTCGAGATGGTGCCTCTCGTCCAGTCTCTCATTGATCGGAAAGCGAGCAGTTCATTCTCGAAGCGGGGTTCCATGATTTACACGAAGACGCCTTCTAGAGAATCATTGCACAGGAAAAAAGGTAGGAATATTGGCCATTCTGTTCCGACCAAGAATAAAAAAGATCATGGCGACAAGGACCAAGGTCGCGACGTTGATAATAATCCAGATGCTGATGCCTTTGCAGTGTTGTCCTCAAGTTCTTTGGCCTCTGAAAGAGACAACGAAGAGCTAACCACATTGAGAGAACAATTGGAGGATCTGCAAAAGAAATTGCTTGAAAAGGATGAACTTCTAAAATCAGCAGAGATGTCAAATGACCAGATGAACAGTGTTTATGCAAAGCTTGATGCTTTGAATCTCCAGTCTGCAGAGAAGGATTCTATGATGAAGTCTATTCATTCCCAACTTTCAGATGCAAAGATTAAGCTTGCTGATAAGCAAGCTGCCTTGGAGAAGATGCAATGGGAGGTAATGACATCGAATTCAAAAATAGAAGAACTTCAAGAAGAGCTAATGTCCTCGCAAGGAGACGTTTCATCGTTTATGCTGTTACTTGAGGGCTTGATGGAGAATGATTGCAATGAAGGCATGGAAGATTATAGTCTTTCGTTGCATCTCCCGGAGAGCTGCCCTTATATTGATGATATGGACGACCTGGAAATGCAGAAAATGGAAGAAGCAAGCCAAGCATATGTAGCTGCTGTTGCTGCTGCAAAGGCAAGGCAAGATGAAGAATCTATTGCTGCTGCTGCAACTGCAAGATCATGTCTTCAGTCATTCGTTTTCAGGACTTAAGTTTCAGACGTTTATTGGAATGATCAAATCAATCGCGCTCGCTGCATTCAGCATTCAAATGGTATCAATTGGCATTTCAGCATTCATATGGTATCAACTGGCATTTCAACATTCATATGGTATTCTTCATGGGGGGTTACTCAAGTTATTTATTTGTAATCATTTGTGGAATATGAAAAAGGGAACATTTGTTTCATTTTGTATGTATGATGTATCTAACCTTCCCCATATCT ATGTTTGAGCCCCAACATTTCGTCGATTTGCAAGATAACAATGCTTTCGCCGATAATAAATCATGGCTTTCCGGCGACCACAACTCGTCCCCGACTCCGCTCCTCAGTCTCTCTTCACTCTCCAATGCATCGATTTCAACTTCGGCAACTACTGCTGATGGCGCTAATGGAAATGTTGATCGCGAACTCTACAACAATCTCGTCGAGATGGTGCCTCTCGTCCAGTCTCTCATTGATCGGAAAGCGAGCAGTTCATTCTCGAAGCGGGGTTCCATGATTTACACGAAGACGCCTTCTAGAGAATCATTGCACAGGAAAAAAGGTAGGAATATTGGCCATTCTGTTCCGACCAAGAATAAAAAAGATCATGGCGACAAGGACCAAGGTCGCGACGTTGATAATAATCCAGATGCTGATGCCTTTGCAGTGTTGTCCTCAAGTTCTTTGGCCTCTGAAAGAGACAACGAAGAGCTAACCACATTGAGAGAACAATTGGAGGATCTGCAAAAGAAATTGCTTGAAAAGGATGAACTTCTAAAATCAGCAGAGATGTCAAATGACCAGATGAACAGTGTTTATGCAAAGCTTGATGCTTTGAATCTCCAGTCTGCAGAGAAGGATTCTATGATGAAGTCTATTCATTCCCAACTTTCAGATGCAAAGATTAAGCTTGCTGATAAGCAAGCTGCCTTGGAGAAGATGCAATGGGAGGTAATGACATCGAATTCAAAAATAGAAGAACTTCAAGAAGAGCTAATGTCCTCGCAAGGAGACGTTTCATCGTTTATGCTGTTACTTGAGGGCTTGATGGAGAATGATTGCAATGAAGGCATGGAAGATTATAGTCTTTCGTTGCATCTCCCGGAGAGCTGCCCTTATATTGATGATATGGACGACCTGGAAATGCAGAAAATGGAAGAAGCAAGCCAAGCATATGTAGCTGCTGTTGCTGCTGCAAAGGCAAGGCAAGATGAAGAATCTATTGCTGCTGCTGCAACTGCAAGATCATGTCTTCAGTCATTCGTTTTCAGGACTTAA MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLIDRKASSSFSKRGSMIYTKTPSRESLHRKKGRNIGHSVPTKNKKDHGDKDQGRDVDNNPDADAFAVLSSSSLASERDNEELTTLREQLEDLQKKLLEKDELLKSAEMSNDQMNSVYAKLDALNLQSAEKDSMMKSIHSQLSDAKIKLADKQAALEKMQWEVMTSNSKIEELQEELMSSQGDVSSFMLLLEGLMENDCNEGMEDYSLSLHLPESCPYIDDMDDLEMQKMEEASQAYVAAVAAAKARQDEESIAAAATARSCLQSFVFRT
BLAST of Carg22773-RA vs. NCBI nr
Match: XP_022955318.1 (protein MICROTUBULE BINDING PROTEIN 2C-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 383.6 bits (984), Expect = 6.9e-103 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0
BLAST of Carg22773-RA vs. NCBI nr
Match: XP_023541850.1 (protein MICROTUBULE BINDING PROTEIN 2C-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 345.1 bits (884), Expect = 2.7e-91 Identity = 309/345 (89.57%), Postives = 312/345 (90.43%), Query Frame = 0
BLAST of Carg22773-RA vs. NCBI nr
Match: XP_022994252.1 (protein MICROTUBULE BINDING PROTEIN 2C-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 336.7 bits (862), Expect = 9.6e-89 Identity = 294/345 (85.22%), Postives = 297/345 (86.09%), Query Frame = 0
BLAST of Carg22773-RA vs. NCBI nr
Match: XP_022955320.1 (protein MICROTUBULE BINDING PROTEIN 2C-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 296.2 bits (757), Expect = 1.4e-76 Identity = 310/345 (89.86%), Postives = 310/345 (89.86%), Query Frame = 0
BLAST of Carg22773-RA vs. NCBI nr
Match: XP_023518984.1 (protein MICROTUBULE BINDING PROTEIN 2C-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 294.3 bits (752), Expect = 5.5e-76 Identity = 219/296 (73.99%), Postives = 238/296 (80.41%), Query Frame = 0
BLAST of Carg22773-RA vs. TAIR10
Match: AT5G08120.1 (movement protein binding protein 2C) HSP 1 Score: 114.0 bits (284), Expect = 1.8e-25 Identity = 74/178 (41.57%), Postives = 105/178 (58.99%), Query Frame = 0
BLAST of Carg22773-RA vs. Swiss-Prot
Match: sp|A0A1S3X835|MBP2C_TOBAC (Protein MICROTUBULE BINDING PROTEIN 2C OS=Nicotiana tabacum OX=4097 GN=MBP2C PE=1 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.4e-29 Identity = 95/194 (48.97%), Postives = 119/194 (61.34%), Query Frame = 0
BLAST of Carg22773-RA vs. Swiss-Prot
Match: sp|Q9LEZ4|MBP2C_ARATH (Protein MICROTUBULE BINDING PROTEIN 2C OS=Arabidopsis thaliana OX=3702 GN=MBP2C PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.3e-24 Identity = 74/178 (41.57%), Postives = 105/178 (58.99%), Query Frame = 0
BLAST of Carg22773-RA vs. TrEMBL
Match: tr|A0A1S3BYW3|A0A1S3BYW3_CUCME (uncharacterized protein LOC103494547 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494547 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 3.5e-63 Identity = 229/304 (75.33%), Postives = 254/304 (83.55%), Query Frame = 0
BLAST of Carg22773-RA vs. TrEMBL
Match: tr|A0A1S3BXC6|A0A1S3BXC6_CUCME (uncharacterized protein LOC103494547 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494547 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 4.6e-63 Identity = 273/353 (77.34%), Postives = 298/353 (84.42%), Query Frame = 0
BLAST of Carg22773-RA vs. TrEMBL
Match: tr|A0A067K8P9|A0A067K8P9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11764 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.7e-55 Identity = 125/198 (63.13%), Postives = 151/198 (76.26%), Query Frame = 0
BLAST of Carg22773-RA vs. TrEMBL
Match: tr|A0A0A0LVN6|A0A0A0LVN6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039950 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 2.0e-50 Identity = 253/352 (71.88%), Postives = 279/352 (79.26%), Query Frame = 0
BLAST of Carg22773-RA vs. TrEMBL
Match: tr|V4VMK1|V4VMK1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10020920mg PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 2.6e-50 Identity = 118/195 (60.51%), Postives = 143/195 (73.33%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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