Carg19330-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGCAGCGGTGCTGATACAGACGGCAACGAGTTCAAGAATGCAAAGGAGATGTGGATGGAGCAGGTCGGAGATACCACTAAGCGTACCCAGTGGTATCGTGAAGGCGTAGGGTATTGGCAAGGTGTAGAGGCATCGGTGAATGGGGTTTTGGGTGGCTATGGTCATGTTAGCGACGGCGATATCTTGGGCAGTGAAGTCTTTCTCAAATCAATTTTGGCCGAACGTTTCCCTCTTGCTGGAAAAGACCGCCCTCTTGTCGCTCTTGGTATGTCTGTCTGTTTATATCCACTTCTTAATTTTTTTGAATTCCAGATTTTTGTTTATGACCTGCTTTCAGTACATGCTCTACTTCTTTTCTTACAATTTAGTCTTCTTTTACTTTTATTCCTACTCGAGTTTGTTTAGTTCGTGCATATGATGAGTTGTACTACTTTGTCGTTAATGCTCTATATCTGAGCACGTAGTTTTACTAATGCCGGAGCTGCCTGCTATTCCAGATTGTGGTTCTGGCATTGGGAGAGTCACGAAGAATCTTCTTATCAGATATTTTAATGAGGTAAGATAACACAAGTTACTTTATTGTTGCTGCCATATTACTTTCTTGCTTTTTATCTGTCTATCTTGGGATTTGTCGAGTAAAATTTATGAAATGGTGCTTGCTTTGGTTTTTGGATTGTGCAATCTGATCAGACAGTTGGAAAGATTCGTTCATCTCTCCGGATACCATTATTGAGGTTCAGCTATTTGTTTCATTTCCTTGACTTCAATAAATGGTTTTCTGGTGATTGATGTTTCATATTATGCTTTGATATAGATTTTCATGATTCTGGAATCAATGCGACGCCTTCAATTTGAAAAAAATATTATAACATCTACTTTTCTTATTTGTAATTTCTTTGGTCTACTAGTATACAAACTTACCCCTACAAAAAAGTCTATTTATTTATTTATCCTTTTTTGAGCCTTAGGTTGATCTTCTTGAACCTGTATCACATTTCCTAGAGGCTGCCCGTGAAAGCTTGGCTCCTGAAAATAATGGGGCCTCTGATCTGCACAAAGCCACTAACTTCTTTTGCGTGCCGCTACAGGTAGTATGTAATGTAGTGATATCCAACAAATGCAAAATTAGCAAATTTGTTATATTCTGTGGTTCTGTATGCTGAAGATCTTCTCTTTGCTGCTTTAGGTGGTACTTGGTAATCTATGTACCTTTTTGGATGAGAAAGGAATTCTGCTTTTTGTATAAAGAGCCTATTCTTAAACTTTTTCCTCCAACTCACACCATCCTCTAGTATGCGACTGAAAAGGAAAGAGTTATAAGAAAATGGAAAACAATTGCAAACATGGGTATAGCTAGATGGCTTAGACAGTACTTCTGTCTCTTGAGGTCGGAGGTTTAATCCCCACGCCCTGTATTTCTTGAAATTAAATAAATAATAAACAAGTAAAAAAACTGGAAAACAACTTTTAATATGTCTAGATGTCACATAATACATGTACAATGCCCAGTAGGTAAGACATTGTATTGAGGAGTTTTATGTGATAAGTTGCTATAGTATTGTAGTAGATGCTACTGCGCCATTGGATCTTCTCCATTTTCCTGTCTGTTTATATTTGATCTCCAGCGGTAAACTTTGAATGCTAAATGCCTATATGTCTGAATTATCTTTGACATTCATGTATTTGGCTGGATGTTTCTTGATTTTGTAACTGGCTCAACCCGTTGTCGCTCTTTTAAAACATCTAGATTTTACTCTACCGTTAGGAATTCACGCCAGATGCAGGAAGATATGATGTTATTTGGGTTCAGTGGTGTATTGGACATCTCACTGATGAGGACTTTATCTCGTTCTTTAAAAGAGCCAAGGTAAGTTTTTCTCTTTTTCTTGAATCAAGCTCTGAAGAATTTTGTTAGTTGAGTTATTTACCATTTCTTGGGGCCTTTTGGCTGTAAAGTGGTCTAGCTGTCAGTAACCCTTGAGATATTTAGATCTTCTAATTTTTTTCTGACATTAGCCCTTACCTTTTTCTTTTCTTTTTTTTTTTTTTGCCACCTTTATTTGTTGTGTGGTTCTTCTAATGTGGATGATATATTTTGAATTAGTTACTAAAATGTCAATATAATGTTCACATTAGAGACTAAGATGTGAAAATGTCAATAGACATACTGCCGACAAAATTTACTGTTAATGGAAGCTTGAAGGCTCTATTTGGATTCAAACTTAAAATTCTGTAACCAAGGCTAAATACTCATCTAAACTCCGTCTGTGTCTTGTCTAACATGTTACTAATATATATACATATATAGTTTAAGAAAGATCCCAAATAACTTTATGCATGAAAATTTCAATATTTCAATTAATATCAAAGGGAAATATCTTTTTGATCATTTATACTGAACATAGAAATCCTTAATATTGTATCGGTAATCAACAAAGGAAGTCGTTTCTCACAAGAAAGTGGGAAACACAAGGATAGACAAGATATATCCACCTAGGTCAAGGTTTGTTTACAAAAAGGACTTTGAGTTGGCGTTGACGAGAAAATCGTCATTATTGCAAAAGGAAAAAAAGGTGCAAACTGGCATTTGTAGTTTTCAAACCTCCTCTGGATCTCTTGCCTTTTGTTCAAGTATACTTTTTCCTTTTGTTCAAACTTCCCAAGAATTGCTTTGAACTGATTTCCTGAAAAAAAAAACTTAAGACACAGTAACACAAAAAGATGAAATGATCATTATATTGTTGGTCTTGGCTTGAAAATCATTCTAAGTGAGTCTTATGGTGCTTCTTGTAAATGATAAGGTCGTTTCTGAACATTAATTATTGTGGTTCTATTTTTTTCTTACTGTTTCAGTTTTCCTTTCACATCGATAGTCGTTCATGTTTCTGATAGCATCATCTTACAATTAATCAACTTCTCATGTCTCTGAAACACCTTGCAATCAATCAAAAGTTTCATGTTTCTGATTACTCTTATTAAAAAAAAATTGATAGCTGGATTTAACTCTTAAGAATTAAGAATGCTATGAATGCTGTCATCAGGTAGACTTATGACCTATCTTGGCTCTTTACTTTCAGTTGGGCCTAAAAGCTGGCGGAATTTTCATTCTGAAGGAAAATATTGCAAGATCTGGTACCTGCCATTTTCAGTTCTTTTTGTTATGAATATTATGCTGTCTAGTTACAAAGATTTATTATCTCAATTTCAATACCTGATATCTGCATTCAATGAAAATGATTTTCATTCTTCTATTTTCATTGAAGTTTCTGTTTCTTTCCAGAAAAAGAAAAACCTTTGTATTTAAAGAGCATGTCTGCCTCATCGACCTTTCCAGTGGGACCATTCTAGCTGAAAATTAAAATGAACATATCAAAACTCAAGTATTTTATCTTGTTGCAGGATTCATATTAGATAAAGAAGATCGAAGCATCACAAGATCTGATCCATACTATAAAGATCTATTCAATCAGTGCGGACTCTATCCATTTAAATCAAGGGTAAAGTGACTATGCATTTGGTTTAGTCTATTCAATGCTACTTTTATTGATTTTTTTTTTTTTTTTTTTCCATCTGTTCCATCATCAAACCAGATTGCAAAATGATTTTCTCGGTTGTTATTTTATTTTAATCGATTTTTGTTTCATAAATACATCTGTGGAAGTCACTTCAAATATCAAGGCATTAATTATAAATGAGACTCATCTGGCTATGTTCATAAGAGGCTCTTAGATTTCTATCCTTCCAGTCAGGATGCCTTCTGATCTCAAAATATTGGAATTGAGTTATTAGTTCTATGAAGTTGTAAACTAGTGCTATCAACATTCCTGCTTTACCTCACTATACTTGGTGGTTTATTCACTACCCTAAAGAAATGAACAAAAGCGGTTGTTTGCTAAGAATTGGAGAGGGTAGCCACTTTTCAACTAGCATGCAGTTGATAGGTAGTGCACCTTTTATGGTTCACACGTTCACATTGCTATTTACCACGATTGACAGGTCTTAGTAGCTTACCTTGCAACTTGCTCGCAAATTCATACTGGACTCCGGAACTTATTCCATAAAGGAATTTAATTTGCATTTATTTGATGGAAAAAATAAAATGAAATGTGAACTAGTTAGCCAATTCAATAGCAGTGTGAAGAGAAGCTTACCTTGCTTATAAAGGATTGGGTTACATAGATTGAATATGAATAAACTTGTAACCAGCACGTCCCAACTCAATCCATTAACACTCCTTATAACTGGGTATAATTCTATTACATGTGCACTCACTTTCCTTGCAAACTTGAACCCTGTGTTATTCCTCCTCTCAAATACCGAGTTTCTTCTACTTTATTGTGCTCATGATTTTAGGACCAAAAGGGATTTCCCGAGGAATTATTTCCTGTGAAGATGTATGCATTAACTACGGAGGTGCCCAGGAGGATTTCTCGTACCAGAAGGGAACAAATCAATAGACCTGGAGTTATCAAGTGAGGATCTTGATCTCATTTCTATCCTTTCTGAATGAGTCAGTTGCTGTGATTTGGCTAGCAATGATACATTTGTGTTCGGTTACTTTTGAACCTTATTTGTTTGTACAGATTTCATGTTTTAGATATCTTGAAGTGATAAGTATGACCTCTCTTAGTCTTTGTTAACTGCCTGTTATTGATTGTTGAATACTCTCGTTTGAAAGATATGAACAAAAGAAAATTCCAAAACCCAAGCTAGTTTTAGAGAATGGTTTCTTGGACCAACTTTGTATTCCTATTTTTCCATTTCAAGAATTGTTTCAAAAGATATTTGCCCGATCTGCAGTGAACTAAATCCCTATTATTTATACAAACTTACAAAATCTAGTTACCACATAGCTAAGGCAACTAATGGGATAATTAAGCTTAATTGCTCAAATCCCTGAGATAATTTAGGTACGAACCCCAGAAGAAAGGGAAAGGGACGTTTTTGCATTTTAGTGTAGTAGAAGATGGATC ATGGAGGGCAGCGGTGCTGATACAGACGGCAACGAGTTCAAGAATGCAAAGGAGATGTGGATGGAGCAGGTCGGAGATACCACTAAGCGTACCCAGTGGTATCGTGAAGGCGTAGGGTATTGGCAAGGTGTAGAGGCATCGGTGAATGGGGTTTTGGGTGGCTATGGTCATGTTAGCGACGGCGATATCTTGGGCAGTGAAGTCTTTCTCAAATCAATTTTGGCCGAACGTTTCCCTCTTGCTGGAAAAGACCGCCCTCTTGTCGCTCTTGATTGTGGTTCTGGCATTGGGAGAGTCACGAAGAATCTTCTTATCAGATATTTTAATGAGGTTGATCTTCTTGAACCTGTATCACATTTCCTAGAGGCTGCCCGTGAAAGCTTGGCTCCTGAAAATAATGGGGCCTCTGATCTGCACAAAGCCACTAACTTCTTTTGCGTGCCGCTACAGGAATTCACGCCAGATGCAGGAAGATATGATGTTATTTGGGTTCAGTGGTGTATTGGACATCTCACTGATGAGGACTTTATCTCGTTCTTTAAAAGAGCCAAGTTGGGCCTAAAAGCTGGCGGAATTTTCATTCTGAAGGAAAATATTGCAAGATCTGGATTCATATTAGATAAAGAAGATCGAAGCATCACAAGATCTGATCCATACTATAAAGATCTATTCAATCAGTGCGGACTCTATCCATTTAAATCAAGGGACCAAAAGGGATTTCCCGAGGAATTATTTCCTGTGAAGATGTATGCATTAACTACGGAGGTGCCCAGGAGGATTTCTCGTACCAGAAGGGAACAAATCAATAGACCTGGAGTTATCAAGTGAGGATCTTGATCTCATTTCTATCCTTTCTGAATGAGTCAGTTGCTGTGATTTGGCTAGCAATGATACATTTGTGTTCGGTTACTTTTGAACCTTATTTGTTTGTACAGATTTCATGTTTTAGATATCTTGAAGTGATAAGTATGACCTCTCTTAGTCTTTGTTAACTGCCTGTTATTGATTGTTGAATACTCTCGTTTGAAAGATATGAACAAAAGAAAATTCCAAAACCCAAGCTAGTTTTAGAGAATGGTTTCTTGGACCAACTTTGTATTCCTATTTTTCCATTTCAAGAATTGTTTCAAAAGATATTTGCCCGATCTGCAGTGAACTAAATCCCTATTATTTATACAAACTTACAAAATCTAGTTACCACATAGCTAAGGCAACTAATGGGATAATTAAGCTTAATTGCTCAAATCCCTGAGATAATTTAGGTACGAACCCCAGAAGAAAGGGAAAGGGACGTTTTTGCATTTTAGTGTAGTAGAAGATGGATC ATGGAGGGCAGCGGTGCTGATACAGACGGCAACGAGTTCAAGAATGCAAAGGAGATGTGGATGGAGCAGGTCGGAGATACCACTAAGCGTACCCAGTGGTATCGTGAAGGCGTAGGGTATTGGCAAGGTGTAGAGGCATCGGTGAATGGGGTTTTGGGTGGCTATGGTCATGTTAGCGACGGCGATATCTTGGGCAGTGAAGTCTTTCTCAAATCAATTTTGGCCGAACGTTTCCCTCTTGCTGGAAAAGACCGCCCTCTTGTCGCTCTTGATTGTGGTTCTGGCATTGGGAGAGTCACGAAGAATCTTCTTATCAGATATTTTAATGAGGTTGATCTTCTTGAACCTGTATCACATTTCCTAGAGGCTGCCCGTGAAAGCTTGGCTCCTGAAAATAATGGGGCCTCTGATCTGCACAAAGCCACTAACTTCTTTTGCGTGCCGCTACAGGAATTCACGCCAGATGCAGGAAGATATGATGTTATTTGGGTTCAGTGGTGTATTGGACATCTCACTGATGAGGACTTTATCTCGTTCTTTAAAAGAGCCAAGTTGGGCCTAAAAGCTGGCGGAATTTTCATTCTGAAGGAAAATATTGCAAGATCTGGATTCATATTAGATAAAGAAGATCGAAGCATCACAAGATCTGATCCATACTATAAAGATCTATTCAATCAGTGCGGACTCTATCCATTTAAATCAAGGGACCAAAAGGGATTTCCCGAGGAATTATTTCCTGTGAAGATGTATGCATTAACTACGGAGGTGCCCAGGAGGATTTCTCGTACCAGAAGGGAACAAATCAATAGACCTGGAGTTATCAAGTGA MEGSGADTDGNEFKNAKEMWMEQVGDTTKRTQWYREGVGYWQGVEASVNGVLGGYGHVSDGDILGSEVFLKSILAERFPLAGKDRPLVALDCGSGIGRVTKNLLIRYFNEVDLLEPVSHFLEAARESLAPENNGASDLHKATNFFCVPLQEFTPDAGRYDVIWVQWCIGHLTDEDFISFFKRAKLGLKAGGIFILKENIARSGFILDKEDRSITRSDPYYKDLFNQCGLYPFKSRDQKGFPEELFPVKMYALTTEVPRRISRTRREQINRPGVIK
BLAST of Carg19330-RA vs. NCBI nr
Match: XP_022925690.1 (alpha N-terminal protein methyltransferase 1 [Cucurbita moschata]) HSP 1 Score: 570.1 bits (1468), Expect = 4.1e-159 Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 0
BLAST of Carg19330-RA vs. NCBI nr
Match: XP_023544586.1 (alpha N-terminal protein methyltransferase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 569.3 bits (1466), Expect = 7.0e-159 Identity = 273/275 (99.27%), Postives = 274/275 (99.64%), Query Frame = 0
BLAST of Carg19330-RA vs. NCBI nr
Match: XP_022977477.1 (alpha N-terminal protein methyltransferase 1-like [Cucurbita maxima]) HSP 1 Score: 564.3 bits (1453), Expect = 2.3e-157 Identity = 271/275 (98.55%), Postives = 272/275 (98.91%), Query Frame = 0
BLAST of Carg19330-RA vs. NCBI nr
Match: XP_008439521.1 (PREDICTED: alpha N-terminal protein methyltransferase 1 isoform X1 [Cucumis melo]) HSP 1 Score: 521.5 bits (1342), Expect = 1.7e-144 Identity = 249/275 (90.55%), Postives = 260/275 (94.55%), Query Frame = 0
BLAST of Carg19330-RA vs. NCBI nr
Match: XP_008439522.1 (PREDICTED: alpha N-terminal protein methyltransferase 1 isoform X2 [Cucumis melo]) HSP 1 Score: 521.5 bits (1342), Expect = 1.7e-144 Identity = 249/275 (90.55%), Postives = 260/275 (94.55%), Query Frame = 0
BLAST of Carg19330-RA vs. TAIR10
Match: AT5G44450.1 (methyltransferases) HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-111 Identity = 189/279 (67.74%), Postives = 231/279 (82.80%), Query Frame = 0
BLAST of Carg19330-RA vs. Swiss-Prot
Match: sp|Q5PP70|NTM1_ARATH (Alpha N-terminal protein methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=At5g44450 PE=2 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 5.4e-110 Identity = 189/279 (67.74%), Postives = 231/279 (82.80%), Query Frame = 0
BLAST of Carg19330-RA vs. Swiss-Prot
Match: sp|A2XMJ1|NTM1_ORYSI (Alpha N-terminal protein methyltransferase 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_13745 PE=3 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.6e-93 Identity = 171/308 (55.52%), Postives = 208/308 (67.53%), Query Frame = 0
BLAST of Carg19330-RA vs. Swiss-Prot
Match: sp|Q10CT5|NTM1_ORYSJ (Alpha N-terminal protein methyltransferase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0780900 PE=2 SV=2) HSP 1 Score: 338.2 bits (866), Expect = 8.6e-92 Identity = 169/308 (54.87%), Postives = 205/308 (66.56%), Query Frame = 0
BLAST of Carg19330-RA vs. Swiss-Prot
Match: sp|Q4KLE6|NT1AB_XENLA (N-terminal Xaa-Pro-Lys N-methyltransferase 1-B OS=Xenopus laevis OX=8355 GN=ntmt1-b PE=2 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 5.3e-49 Identity = 94/222 (42.34%), Postives = 133/222 (59.91%), Query Frame = 0
BLAST of Carg19330-RA vs. Swiss-Prot
Match: sp|Q55DH6|NTM1_DICDI (Alpha N-terminal protein methyltransferase 1 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0269658 PE=3 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 2.0e-48 Identity = 106/257 (41.25%), Postives = 155/257 (60.31%), Query Frame = 0
BLAST of Carg19330-RA vs. TrEMBL
Match: tr|A0A1S3AZL9|A0A1S3AZL9_CUCME (alpha N-terminal protein methyltransferase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484292 PE=4 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 1.1e-144 Identity = 249/275 (90.55%), Postives = 260/275 (94.55%), Query Frame = 0
BLAST of Carg19330-RA vs. TrEMBL
Match: tr|A0A1S3AYJ5|A0A1S3AYJ5_CUCME (alpha N-terminal protein methyltransferase 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484292 PE=4 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 1.1e-144 Identity = 249/275 (90.55%), Postives = 260/275 (94.55%), Query Frame = 0
BLAST of Carg19330-RA vs. TrEMBL
Match: tr|A0A1S3AYZ5|A0A1S3AYZ5_CUCME (alpha N-terminal protein methyltransferase 1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484292 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 3.2e-144 Identity = 248/274 (90.51%), Postives = 259/274 (94.53%), Query Frame = 0
BLAST of Carg19330-RA vs. TrEMBL
Match: tr|A0A0A0KIY9|A0A0A0KIY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525730 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 3.2e-144 Identity = 247/275 (89.82%), Postives = 260/275 (94.55%), Query Frame = 0
BLAST of Carg19330-RA vs. TrEMBL
Match: tr|A0A067GD14|A0A067GD14_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g018970mg PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 1.9e-120 Identity = 205/280 (73.21%), Postives = 248/280 (88.57%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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