Carg11524-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11524-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ethylene-responsive transcription factor
Location	Cucurbita_argyrosperma_scaffold_083 : 417301 .. 417726 (+)
Sequence length	426

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAAGAAAACAGGAAATGGAGGGAAGAGGTCGACAAACGAAGCTCGTTACCGAGGGATACGGCGGCGTCCATGGGGGAAATTTGCGGCGGAGATTCGTGATCCGTCGAGGAACGGCGCTCGGCTGTGGTTAGGGACATTCGACACGGCGGAGGAAGCGGCAAGAGCGTACGATCAAGCGGCGTATGCGTTCAGAGGACATTTGGCGATTCTGAATTTTCCGAATGAGTACCAAAGTGGAAACCCTCATTTCGCGGCGGCGCCTTCTTCATCAGCGACGACGATCTCTTTCGCCGGAAATTACTCCGTCAACAATGCTAACTATCGATCGGGGGAAGTGATAGAATTCGAGTATTTGGATAATGAACTCTTGGAGGAACTCTTGCAGTCGGAAGGAGAAGGATTTGATCGGAACAATTGA

mRNA sequence

ATGGAAGGAAAGAAAACAGGAAATGGAGGGAAGAGGTCGACAAACGAAGCTCGTTACCGAGGGATACGGCGGCGTCCATGGGGGAAATTTGCGGCGGAGATTCGTGATCCGTCGAGGAACGGCGCTCGGCTGTGGTTAGGGACATTCGACACGGCGGAGGAAGCGGCAAGAGCGTACGATCAAGCGGCGTATGCGTTCAGAGGACATTTGGCGATTCTGAATTTTCCGAATGAGTACCAAAGTGGAAACCCTCATTTCGCGGCGGCGCCTTCTTCATCAGCGACGACGATCTCTTTCGCCGGAAATTACTCCGTCAACAATGCTAACTATCGATCGGGGGAAGTGATAGAATTCGAGTATTTGGATAATGAACTCTTGGAGGAACTCTTGCAGTCGGAAGGAGAAGGATTTGATCGGAACAATTGA

Coding sequence (CDS)

ATGGAAGGAAAGAAAACAGGAAATGGAGGGAAGAGGTCGACAAACGAAGCTCGTTACCGAGGGATACGGCGGCGTCCATGGGGGAAATTTGCGGCGGAGATTCGTGATCCGTCGAGGAACGGCGCTCGGCTGTGGTTAGGGACATTCGACACGGCGGAGGAAGCGGCAAGAGCGTACGATCAAGCGGCGTATGCGTTCAGAGGACATTTGGCGATTCTGAATTTTCCGAATGAGTACCAAAGTGGAAACCCTCATTTCGCGGCGGCGCCTTCTTCATCAGCGACGACGATCTCTTTCGCCGGAAATTACTCCGTCAACAATGCTAACTATCGATCGGGGGAAGTGATAGAATTCGAGTATTTGGATAATGAACTCTTGGAGGAACTCTTGCAGTCGGAAGGAGAAGGATTTGATCGGAACAATTGA

Protein sequence

MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFAGNYSVNNANYRSGEVIEFEYLDNELLEELLQSEGEGFDRNN

Homology

[Close]

BLAST of Carg11524-RA vs. NCBI nr
Match: XP_022953322.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita moschata])

HSP 1 Score: 276.2 bits (705), Expect = 6.3e-71
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFAGNYSVNNANYRSGEVIEFEY 120
           QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISF GNYS +NANYRSGEVIEFEY
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEY 120

Query: 121 LDNELLEELLQSEGEGFDRNN 142
           LDNELLEELLQSEGEGFDRNN
Sbjct: 121 LDNELLEELLQSEGEGFDRNN 141

[Close]

BLAST of Carg11524-RA vs. NCBI nr
Match: XP_011659259.1 (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus] >KGN44741.1 hypothetical protein Csa_7G375830 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 3.0e-57
Identity = 120/148 (81.08%), Postives = 126/148 (85.14%), Query Frame = 0


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGK+TGN GKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSS-------SATTISFAGNYSVNNANYRSG 120
           QAAYAFRGHLAILNFPNEYQSGNP+F A   S            SF GNYS NNA+  SG
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSXXXXXXXXXXXXSFGGNYSGNNASRGSG 120

Query: 121 EVIEFEYLDNELLEELLQSEGEGFDRNN 142
           EVIEFEYLDNELLEELLQSEGEG++R N
Sbjct: 121 EVIEFEYLDNELLEELLQSEGEGYNRKN 148

[Close]

BLAST of Carg11524-RA vs. NCBI nr
Match: XP_022143601.1 (ethylene-responsive transcription factor ERF098-like [Momordica charantia])

HSP 1 Score: 229.6 bits (584), Expect = 6.8e-57
Identity = 122/148 (82.43%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 1   MEGKKTGNG--GKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARA 60
           MEGK+T     G+RS+NEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARA
Sbjct: 1   MEGKRTAGNELGRRSSNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARA 60

Query: 61  YDQAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSAT-----TISFAGNYSVNNANYRSG 120
           YDQAAYAFRGHLAILNFPNEYQSGNP+ AAA  SSAT     +ISFAGNYS NNA  R  
Sbjct: 61  YDQAAYAFRGHLAILNFPNEYQSGNPNLAAAFGSSATAAASSSISFAGNYSANNACRRPD 120

Query: 121 EVIEFEYLDNELLEELLQSEGEGFDRNN 142
           EVIEFEYLDNELLEELLQSEG+GF+R N
Sbjct: 121 EVIEFEYLDNELLEELLQSEGDGFNRKN 148

[Close]

BLAST of Carg11524-RA vs. NCBI nr
Match: XP_008451255.1 (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo])

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-52
Identity = 111/130 (85.38%), Postives = 114/130 (87.69%), Query Frame = 0


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE
Sbjct: 83  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 142

Query: 79  YQSGNPHF-------AAAPSSSATTISFAGNYSVNNANYRSGEVIEFEYLDNELLEELLQ 138
           YQSGNP+F       AA  SSS TTISF GNYS NNA   SGEVIEFEYLDNELLEELLQ
Sbjct: 143 YQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNNARRGSGEVIEFEYLDNELLEELLQ 202

Query: 139 SEGEGFDRNN 142
           SEGEG++R N
Sbjct: 203 SEGEGYNRKN 212

[Close]

BLAST of Carg11524-RA vs. NCBI nr
Match: XP_022959671.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita moschata])

HSP 1 Score: 213.0 bits (541), Expect = 6.6e-52
Identity = 108/145 (74.48%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGK++ N  K+S NEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPH----FAAAPSSSATTISFAGNYSVNNANYRSGEVI 120
           QAAYAFRGHLAILNFPNEYQSGNP+    F  + ++ +++ +F+GNYS +N ++ S EVI
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVI 120

Query: 121 EFEYLDNELLEELLQSEGEGFDRNN 142
           E EYLDNE+LEELLQSE EGF+R N
Sbjct: 121 ELEYLDNEVLEELLQSEDEGFNRKN 145

[Close]

BLAST of Carg11524-RA vs. TAIR10
Match: AT3G23230.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.7e-30
Identity = 70/130 (53.85%), Postives = 85/130 (65.38%), Query Frame = 0


Query: 5   KTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAY 64
           ++ N   +   +AR+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAARAYD+AA+
Sbjct: 6   RSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAF 65

Query: 65  AFRGHLAILNFPNEYQSGNPHFAAAPS-SSATTISFAGNYSVNNANYRSGEVIEFEYLDN 124
             RGHLAILNFPNEY      ++  P  +S                         EYLD+
Sbjct: 66  NLRGHLAILNFPNEYYPRMDDYSLRPPYASXXXXXXXXXXXXXXXXXXXXXXXXXEYLDD 125

Query: 125 ELLEELLQSE 134
           ++LEELL SE
Sbjct: 126 KVLEELLDSE 135

[Close]

BLAST of Carg11524-RA vs. TAIR10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-28
Identity = 68/129 (52.71%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 13  STNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAI 72
           +TNE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE+AARAYD+AA+  RG  AI
Sbjct: 8   NTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAI 67

Query: 73  LNFPNEYQSGNPHFAAAPSSSATTISFAGNYSVNNANYRSGEVIEFEYLDNELLEELLQS 132
           LNFP+EYQ        +  ++                 R  EVIEFEYLD+ LLEELL  
Sbjct: 68  LNFPHEYQMMKDGPNGSHENAVXXXXXXXXXXXXXXXXR--EVIEFEYLDDSLLEELL-D 127

Query: 133 EGEGFDRNN 142
            GE  +++N
Sbjct: 128 YGERSNQDN 133

[Close]

BLAST of Carg11524-RA vs. TAIR10
Match: AT1G04370.1 (Ethylene-responsive element binding factor 14)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26
Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           G+ +G+GG     + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE+AARAYD+A
Sbjct: 5   GRSSGSGG-GGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRA 64

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFAGNYSVNNANYRSGEVIEFEYLD 122
           AY+ RG  AILNFP+EY  G                                V EFEYLD
Sbjct: 65  AYSMRGKAAILNFPHEYNMGT----------------GSXXXXXXXXXXXXXVFEFEYLD 124

Query: 123 NELLEELLQSEGEGFDRNN 142
           + +L+ELL+  GE +++ +
Sbjct: 125 DSVLDELLE-YGENYNKTH 125

[Close]

BLAST of Carg11524-RA vs. TAIR10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.4e-24
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 18 RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPN 77
          +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAEEAARAYDQAAY+ RG  AILNFP+
Sbjct: 14 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 78 EYQSG 83
          EY  G
Sbjct: 74 EYNMG 78

[Close]

BLAST of Carg11524-RA vs. TAIR10
Match: AT4G17500.1 (ethylene responsive element binding factor 1)

HSP 1 Score: 104.0 bits (258), Expect = 7.8e-23
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE+AA AYD+AA+  RG  A+LNFP  
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207

Query: 79  YQSGNP 85
             SG P
Sbjct: 208 VNSGEP 213

[Close]

BLAST of Carg11524-RA vs. Swiss-Prot
Match: sp|Q9LTC5|ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-29
Identity = 70/130 (53.85%), Postives = 85/130 (65.38%), Query Frame = 0


Query: 5   KTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAY 64
           ++ N   +   +AR+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAARAYD+AA+
Sbjct: 6   RSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAF 65

Query: 65  AFRGHLAILNFPNEYQSGNPHFAAAPS-SSATTISFAGNYSVNNANYRSGEVIEFEYLDN 124
             RGHLAILNFPNEY      ++  P  +S                         EYLD+
Sbjct: 66  NLRGHLAILNFPNEYYPRMDDYSLRPPYASXXXXXXXXXXXXXXXXXXXXXXXXXEYLDD 125

Query: 125 ELLEELLQSE 134
           ++LEELL SE
Sbjct: 126 KVLEELLDSE 135

[Close]

BLAST of Carg11524-RA vs. Swiss-Prot
Match: sp|Q9LTC6|ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-27
Identity = 68/129 (52.71%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 13  STNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAI 72
           +TNE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE+AARAYD+AA+  RG  AI
Sbjct: 8   NTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAI 67

Query: 73  LNFPNEYQSGNPHFAAAPSSSATTISFAGNYSVNNANYRSGEVIEFEYLDNELLEELLQS 132
           LNFP+EYQ        +  ++                 R  EVIEFEYLD+ LLEELL  
Sbjct: 68  LNFPHEYQMMKDGPNGSHENAVXXXXXXXXXXXXXXXXR--EVIEFEYLDDSLLEELL-D 127

Query: 133 EGEGFDRNN 142
            GE  +++N
Sbjct: 128 YGERSNQDN 133

[Close]

BLAST of Carg11524-RA vs. Swiss-Prot
Match: sp|P93822|ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.7e-25
Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           G+ +G+GG     + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE+AARAYD+A
Sbjct: 5   GRSSGSGG-GGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRA 64

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFAGNYSVNNANYRSGEVIEFEYLD 122
           AY+ RG  AILNFP+EY  G                                V EFEYLD
Sbjct: 65  AYSMRGKAAILNFPHEYNMGT----------------GSXXXXXXXXXXXXXVFEFEYLD 124

Query: 123 NELLEELLQSEGEGFDRNN 142
           + +L+ELL+  GE +++ +
Sbjct: 125 DSVLDELLE-YGENYNKTH 125

[Close]

BLAST of Carg11524-RA vs. Swiss-Prot
Match: sp|Q9LSX0|ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-23
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 18 RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPN 77
          +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAEEAARAYDQAAY+ RG  AILNFP+
Sbjct: 14 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 78 EYQSG 83
          EY  G
Sbjct: 74 EYNMG 78

[Close]

BLAST of Carg11524-RA vs. Swiss-Prot
Match: sp|O80337|EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE+AA AYD+AA+  RG  A+LNFP  
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207

Query: 79  YQSGNP 85
             SG P
Sbjct: 208 VNSGEP 213

[Close]

BLAST of Carg11524-RA vs. TrEMBL
Match: tr|A0A0A0KAA6|A0A0A0KAA6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375830 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.0e-57
Identity = 120/148 (81.08%), Postives = 126/148 (85.14%), Query Frame = 0


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGK+TGN GKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSS-------SATTISFAGNYSVNNANYRSG 120
           QAAYAFRGHLAILNFPNEYQSGNP+F A   S            SF GNYS NNA+  SG
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSXXXXXXXXXXXXSFGGNYSGNNASRGSG 120

Query: 121 EVIEFEYLDNELLEELLQSEGEGFDRNN 142
           EVIEFEYLDNELLEELLQSEGEG++R N
Sbjct: 121 EVIEFEYLDNELLEELLQSEGEGYNRKN 148

[Close]

BLAST of Carg11524-RA vs. TrEMBL
Match: tr|A0A1S3BR43|A0A1S3BR43_CUCME (ethylene-responsive transcription factor ERF098-like OS=Cucumis melo OX=3656 GN=LOC103492603 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.9e-52
Identity = 111/130 (85.38%), Postives = 114/130 (87.69%), Query Frame = 0


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE
Sbjct: 83  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 142

Query: 79  YQSGNPHF-------AAAPSSSATTISFAGNYSVNNANYRSGEVIEFEYLDNELLEELLQ 138
           YQSGNP+F       AA  SSS TTISF GNYS NNA   SGEVIEFEYLDNELLEELLQ
Sbjct: 143 YQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNNARRGSGEVIEFEYLDNELLEELLQ 202

Query: 139 SEGEGFDRNN 142
           SEGEG++R N
Sbjct: 203 SEGEGYNRKN 212

[Close]

BLAST of Carg11524-RA vs. TrEMBL
Match: tr|A0A061DPX1|A0A061DPX1_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_004061 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.1e-38
Identity = 91/136 (66.91%), Postives = 106/136 (77.94%), Query Frame = 0


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           GK TGN GK +  E RYRGIRRRPWGKFAAEIRDP+RNGARLWLGTF+TAEEAARAYD+A
Sbjct: 8   GKNTGNNGKGNA-EVRYRGIRRRPWGKFAAEIRDPTRNGARLWLGTFETAEEAARAYDRA 67

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFAGNYSVNNAN---YRSGEVIEFE 122
           A+AFRGH AILNFPNEYQS NP F  + +SS+T       Y V   N    R  EVIEFE
Sbjct: 68  AFAFRGHSAILNFPNEYQSHNPIFPPSLASSST-------YGVGRGNPPRGRGSEVIEFE 127

Query: 123 YLDNELLEELLQSEGE 136
           YLD++LLE+LL+++ +
Sbjct: 128 YLDDKLLEDLLETQDD 135

[Close]

BLAST of Carg11524-RA vs. TrEMBL
Match: tr|A0A0D2NAN9|A0A0D2NAN9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G176700 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-37
Identity = 87/135 (64.44%), Postives = 102/135 (75.56%), Query Frame = 0


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           ME  + G     +  E RYRGIRRRPWGKFAAEIRDP+RNGARLWLGTF+TAEEAARAYD
Sbjct: 1   MEASQEGKNRGNNNGEVRYRGIRRRPWGKFAAEIRDPTRNGARLWLGTFETAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFAGNYSVNNANYRSGEVIEFEY 120
           +AA+AFRGH AILNFPNEYQ  NP F  +  SS+T  +  GN     AN    EVIEFEY
Sbjct: 61  RAAFAFRGHTAILNFPNEYQYQNPSFPPSSVSSSTYSAGRGNPQRGGAN----EVIEFEY 120

Query: 121 LDNELLEELLQSEGE 136
           LD++LLE+LLQ++ +
Sbjct: 121 LDDKLLEDLLQTQDD 131

[Close]

BLAST of Carg11524-RA vs. TrEMBL
Match: tr|A0A2P5Q608|A0A2P5Q608_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD33122 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-37
Identity = 87/135 (64.44%), Postives = 102/135 (75.56%), Query Frame = 0


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           ME  + G     +  E RYRGIRRRPWGKFAAEIRDP+RNGARLWLGTF+TAEEAARAYD
Sbjct: 1   MEASQEGKNRGNNNGEVRYRGIRRRPWGKFAAEIRDPTRNGARLWLGTFETAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFAGNYSVNNANYRSGEVIEFEY 120
           +AA+AFRGH AILNFPNEYQ  NP F  +  SS+T  +  GN     AN    EVIEFEY
Sbjct: 61  RAAFAFRGHTAILNFPNEYQYQNPSFPPSSVSSSTYSAGRGNPQRGGAN----EVIEFEY 120

Query: 121 LDNELLEELLQSEGE 136
           LD++LLE+LLQ++ +
Sbjct: 121 LDDKLLEDLLQTQDD 131

The following BLAST results are available for this feature:

BLAST of Carg11524-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953322.1	6.3e-71	97.87	ethylene-responsive transcription factor ERF098-like [Cucurbita moschata]	[more]
XP_011659259.1	3.0e-57	81.08	PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus...	[more]
XP_022143601.1	6.8e-57	82.43	ethylene-responsive transcription factor ERF098-like [Momordica charantia]	[more]
XP_008451255.1	2.9e-52	85.38	PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo]	[more]
XP_022959671.1	6.6e-52	74.48	ethylene-responsive transcription factor ERF098-like [Cucurbita moschata]	[more]

BLAST of Carg11524-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23230.1	1.7e-30	53.85	Integrase-type DNA-binding superfamily protein	[more]
AT3G23220.1	2.1e-28	52.71	Integrase-type DNA-binding superfamily protein	[more]
AT1G04370.1	1.5e-26	46.04	Ethylene-responsive element binding factor 14	[more]
AT5G43410.1	1.4e-24	75.38	Integrase-type DNA-binding superfamily protein	[more]
AT4G17500.1	7.8e-23	69.70	ethylene responsive element binding factor 1	[more]

BLAST of Carg11524-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LTC5\|ERF98_ARATH	3.1e-29	53.85	Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9LTC6\|ERF95_ARATH	3.8e-27	52.71	Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|P93822\|ERF97_ARATH	2.7e-25	46.04	Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
sp\|Q9LSX0\|ERF96_ARATH	2.6e-23	75.38	Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|O80337\|EF100_ARATH	1.4e-21	69.70	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=E...	[more]

BLAST of Carg11524-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KAA6\|A0A0A0KAA6_CUCSA	2.0e-57	81.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375830 PE=4 SV=1	[more]
tr\|A0A1S3BR43\|A0A1S3BR43_CUCME	1.9e-52	85.38	ethylene-responsive transcription factor ERF098-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A061DPX1\|A0A061DPX1_THECC	2.1e-38	66.91	Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao OX=3...	[more]
tr\|A0A0D2NAN9\|A0A0D2NAN9_GOSRA	1.8e-37	64.44	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G176700 PE=4 ...	[more]
tr\|A0A2P5Q608\|A0A2P5Q608_GOSBA	1.8e-37	64.44	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD33122 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR017392	AP2/ERF-transcript_factor
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg11524	Carg11524	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg11524-RA.exon.1	Carg11524-RA.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg11524-RA.CDS.1	Carg11524-RA.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg11524-RA	Carg11524-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 19..30 score: 66.52 coord: 42..58 score: 72.94
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 18..82 e-value: 3.0E-36 score: 136.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 18..69 e-value: 2.7E-14 score: 53.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 18..76 score: 25.027
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 17..77 e-value: 2.68397E-27 score: 96.957
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 4..119 e-value: 9.2E-23 score: 79.1
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 17..78 e-value: 1.0E-31 score: 110.5
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 3..135
None	No IPR available	PANTHER	PTHR31190:SF60	SUBFAMILY NOT NAMED	coord: 3..135
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 18..77