Carg10561-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGAAGACTCGTCGGAGGAGGTACTGGTTGCGGCGCAGCTATTGATGCAGCTGAGCATCGAGGATGACGACGACGACGACAACTGTGGTAGCAATGTCGTTGTGGCGGCGGAGAACAAGAAGAACAAGAAGCTGAAAAAGGGTCACGGCGGCGACCGCGGTGACGGTGGGGAGGAGGAGGAGGTTGATCAGAAGAGATACCAAATTGAGACGTCAATTTGGTTGAAAATCGAAGAGATTTTCGGGAAAGATGATGAAGAAGAAGATTTCAATTCCATTTGTCGGCCTAAGAAGAGACGATTTCGATCCCTCCAAAGCATATATATCACCACCAAACCCATCGGTAATGGTAGATTCCCGGCAAGGGGATCGTCAGAACTTGAACACGGCGGCGATGGCGGTGGCTAA ATGGGAGAAGACTCGTCGGAGGAGGTACTGGTTGCGGCGCAGCTATTGATGCAGCTGAGCATCGAGGATGACGACGACGACGACAACTGTGGTAGCAATGTCGTTGTGGCGGCGGAGAACAAGAAGAACAAGAAGCTGAAAAAGGGTCACGGCGGCGACCGCGGTGACGGTGGGGAGGAGGAGGAGGTTGATCAGAAGAGATACCAAATTGAGACGTCAATTTGGTTGAAAATCGAAGAGATTTTCGGGAAAGATGATGAAGAAGAAGATTTCAATTCCATTTGTCGGCCTAAGAAGAGACGATTTCGATCCCTCCAAAGCATATATATCACCACCAAACCCATCGGTAATGGTAGATTCCCGGCAAGGGGATCGTCAGAACTTGAACACGGCGGCGATGGCGGTGGCTAA ATGGGAGAAGACTCGTCGGAGGAGGTACTGGTTGCGGCGCAGCTATTGATGCAGCTGAGCATCGAGGATGACGACGACGACGACAACTGTGGTAGCAATGTCGTTGTGGCGGCGGAGAACAAGAAGAACAAGAAGCTGAAAAAGGGTCACGGCGGCGACCGCGGTGACGGTGGGGAGGAGGAGGAGGTTGATCAGAAGAGATACCAAATTGAGACGTCAATTTGGTTGAAAATCGAAGAGATTTTCGGGAAAGATGATGAAGAAGAAGATTTCAATTCCATTTGTCGGCCTAAGAAGAGACGATTTCGATCCCTCCAAAGCATATATATCACCACCAAACCCATCGGTAATGGTAGATTCCCGGCAAGGGGATCGTCAGAACTTGAACACGGCGGCGATGGCGGTGGCTAA MGEDSSEEVLVAAQLLMQLSIEDDDDDDNCGSNVVVAAENKKNKKLKKGHGGDRGDGGEEEEVDQKRYQIETSIWLKIEEIFGKDDEEEDFNSICRPKKRRFRSLQSIYITTKPIGNGRFPARGSSELEHGGDGGG
BLAST of Carg10561-RA vs. NCBI nr
Match: XP_022950712.1 (uncharacterized protein LOC111453726 [Cucurbita moschata]) HSP 1 Score: 146.0 bits (367), Expect = 9.5e-32 Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0
BLAST of Carg10561-RA vs. NCBI nr
Match: XP_022133223.1 (uncharacterized protein LOC111005872 [Momordica charantia]) HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14 Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Carg10561-RA vs. NCBI nr
Match: KGN48398.1 (hypothetical protein Csa_6G486710 [Cucumis sativus]) HSP 1 Score: 58.5 bits (140), Expect = 2.0e-05 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of Carg10561-RA vs. NCBI nr
Match: XP_008232192.1 (PREDICTED: uncharacterized protein LOC103331352 [Prunus mume]) HSP 1 Score: 55.5 bits (132), Expect = 1.7e-04 Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Carg10561-RA vs. NCBI nr
Match: ONI01820.1 (hypothetical protein PRUPE_6G161200 [Prunus persica]) HSP 1 Score: 54.7 bits (130), Expect = 2.9e-04 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of Carg10561-RA vs. TrEMBL
Match: tr|A0A0A0KFU1|A0A0A0KFU1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.3e-05 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of Carg10561-RA vs. TrEMBL
Match: tr|M5WYT3|M5WYT3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppb022962mg PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.9e-04 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of Carg10561-RA vs. TrEMBL
Match: tr|A0A251NSY7|A0A251NSY7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G161200 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.9e-04 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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