Carg07486-RA (mRNA) Silver-seed gourd

NameCarg07486-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_019 : 1080753 .. 1081360 (-)
Sequence length186
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAGAAGCACTAAACTTGCAGATGCTACCATGGGAGAAGGGAGGAGCAAGAAGATATCAAAATCATCCTTTCAAGGTTATATCAGACAACAAAAGGGAAGACTTTATATTATTCGTAGCTGTATCGTCATGATCCTCTGCTGGCACGACTAACTCAAAACTCACTCTTGTTTTGCTTTACTTCTTCATGCCTTCACATGTAAATAATAGAGACACATTTTAGATATTTTGCCCAATGATTTCAGACTCTTATTTACAATTTTTGTTTCTTGCCAATGAAATCATCACCAAATTCTCCGACATGTTTAAGGTAGTTATCATGATCAAATTTATCGTAACTTATCATAGTTATATGGTAGTTTATAAATTGTTCTCCGAGTGCTATAACTTAATTGTAATTATCATGACACGACATGTTAAGCATGTGAAACGATTGTAAGGTTCGACTCTCACTTAGATAATTTTTTAATTACATCTTGACTAATCATAGTCAAGATTTAGGCCTTAGCCTTCTCAACTATCATCTAACCTTCTACCGTTCTGCTCTTGATCGACTCTTGTAGGGTTTAGCCTCAAGGGTTAATGATGTGGACTCTTGGGGTTGA

mRNA sequence

ATGAGTAGAAGCACTAAACTTGCAGATGCTACCATGGGAGAAGGGAGGAGCAAGAAGATATCAAAATCATCCTTTCAAGACTCTTATTTACAATTTTTGTTTCTTGCCAATGAAATCATCACCAAATTCTCCGACATGTTTAAGGGTTTAGCCTCAAGGGTTAATGATGTGGACTCTTGGGGTTGA

Coding sequence (CDS)

ATGAGTAGAAGCACTAAACTTGCAGATGCTACCATGGGAGAAGGGAGGAGCAAGAAGATATCAAAATCATCCTTTCAAGACTCTTATTTACAATTTTTGTTTCTTGCCAATGAAATCATCACCAAATTCTCCGACATGTTTAAGGGTTTAGCCTCAAGGGTTAATGATGTGGACTCTTGGGGTTGA

Protein sequence

MSRSTKLADATMGEGRSKKISKSSFQDSYLQFLFLANEIITKFSDMFKGLASRVNDVDSWG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg07486Carg07486gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg07486-RACarg07486-RA-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg07486-RA.CDS.3Carg07486-RA.CDS.3CDS
Carg07486-RA.CDS.2Carg07486-RA.CDS.2CDS
Carg07486-RA.CDS.1Carg07486-RA.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg07486-RA.exon.3Carg07486-RA.exon.3exon
Carg07486-RA.exon.2Carg07486-RA.exon.2exon
Carg07486-RA.exon.1Carg07486-RA.exon.1exon


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23