Carg06513-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAGAGAGAAAGTCAGACATGGAGGCGTGAAGAAGACTACAGGAGGCCATAGCTCTCTCTCTCTCTCTCTCTCCTCGTTTCTCTCTCTATAAATCGCTCTGGATCGCCCCTGTCTCAATCTCTCTGTCTCCAAAGCCTTACATTCGGCGAACTTTTTGACACCCAAAATCAAAATCAAAACCCCATTTCTTTTTTCCTCTTTTTTCAAATGATTGTTTCTTCCTCCTTCGCATCTCTCTCTTCTCCGTTGTTCAGACTGTGAGAAAATTAAGAAAGCGGAAGCTTAGTTTATTTACAGAGTAAGTGGGTTTCATTTGGCTCCGTTTTGATGGCCTTTCGCCTAATGTTCTGCTGTGGAATTGGTTCGGATCGGTACGTTTACTTGATCAATATATTTAGCTTCTGGGTTGAGATTAGAATCTGTTTTTGTCTCTTTTTTTTTTTTTTTTTTTTCCCTTGAAAATCTGATGTGTATTGTATTGGATTCCAATTGTGGGCTCGGGCTGACTTTGAGCTTGTGAGAGATTGTTCAAACTTCATTGGGGAATTTTATCAAACACTTTGTGGGCATGATGTCTTTGGGGGAATGAGTGATGAGTTTCTACATGTTCGAGTTGAATTTGGGATAACATAAAAAGTTTAAGTGAATTTTACTTCATTTTGTTGATCTGATTCCAAAACTGTATGATTTGATTCGGTTTTTCTGTTTGTTCCCCTGATCCTGGCTCGTATGATAGAAAGATTTTGTAACTTTCTAGGATATTTTTGTTTGTTGACTGTTCTATTCTGCAGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTGTTTTCATTGAAGGAATTACACTCAGCCACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGAGGATTTGGTAGCGTTTATTGGGGTCAGCTATGGGACGGATCACAAGTAAATATGCCTTCATTTTTTCTTGTTTTATCCTATCAATTCATGTGGCGTAGACTTGTTTTAAATTTGGGATGTTCTTTTTCAATTTGTTTCATGGAAATTGTGCTACCATTCTTGGTTGTTTCGAACTTACCGAGTCGTTTTAGCTCCGTTTAAATGCTTGTTTCGTTAGTTTTAGAATACTAGTATGCCGATCGATCAAGTTAAGATCTTGCTTGTGCTGAATAATCTATTGAATGTACTAGAATCTTTTGAACTTCATATATGTTCTTTGTATCATGTTCATCTTATGATTGTGAAAGGACGGTGACCAAGGCTGTTCGGTACGGTTTCTGTCAATAAGATTCTTCTCTTTTTCTGTTTCGTTACCTTACCATGCCAGCAAGAATGTTACCATGGCGGTTTGGGACTTAGAGAGTGAGTTCAAGTTATAATGACCACCTACCAAAGATTTAATATCCTATATTGGGAACCAAATGTAGTAGGGTCATCTAGTTGTCTCGTGAGAATAGTTGACGTGTACGCAAGCTGACTTGGCAATCGCTCTAAAGGTTTAGAATTTTGAATTTGTTGAAGCTAGGATTGCAATAAGTTGTTGTGTAAGTTACGTATACTTTAGCTTGACACACCCCGAGCGTTCATGATAAGGAGTTAATACCATAAAGTTCAAAGAGGGAATATTGTTTGCATAATTCAAGGATTGAAATACCATATACCATGTTGACAGTGAGAGCCCACATCAGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGTAGACGTGTTTTAAAACCTTGAGGGGAAACCCGGAAGGAAAAGTCCAAAGAGGACAATATCTCATATACCATGTTGACTGTGATATTCCACAGCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAATCTCTCCCTAGCAGATACGCTTTAAAACCTTGAGGGGATAGCAGACACGCTTTAAAACCTTGAAGGGAAGCCCGAAAGAGAAAGTCTAAAAAGGACAATATCTCATATACCATGTTGACTGTAAGGTCCCACAAGGGTTGAAGAGAGGAAAGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGCGTTTTAAAACTTTGAGGGGAAGCTCAAAAGAGGAAAGTCCAAAAAGGACAATATCTGCTAGCGGTGGACTTGGGCGGTTACATTGACATTATTTGTATTTTAGAATTTTAGAAACAGCAACCTATTCTGAAATCTGAATGGCATGTCTTTGCAGATTGCAGTGAAGAGGTTGAAGGCTTGGAGCAACAAGGCAGACATGGAATTCTCTGTGGAAGTCGAGATACTGGCTCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGCGCCGAAGGGCAAGAACGCTTGATCGTGTACGACTACATGCCCAATCTAAGTCTACTCTCCCATTTACATGGACATCACGCATCAGAATGCCATCTCGATTGGAAACGTCGCATGAAAATCGCGGTTGGATCTGCCGAGGGAATTGCGTACGTAAAACCATCTTTATTTAATCTCAACATTCTCTTATGCATTTTGATCACTCCTAATTTTGTTTGATTCAGTTATCTTCACCACCAAGCAACTCCCCACATCATTCATCGAGATATCAAAGCTAGTAATGTTTTGCTAGATCCAGCTTCGGCATTCTCCTTCTTGAGCTCGCCACTGGCAAGAGACCTCTTGAGAAGTCAAGTGCAACAACAAAACGCACAATCGTAGATTGGGCGTTACCGTTAGTAGTTGAGAAAAGGATTAACGAACTTGCAGACCCAAAGCTAAATGGAGATTACAACGCAGACGAGCTAAAGAGAGTCGTCCTTGTTGCACTCAGATGCTCCCATTCACGGCCAGAGAAACGACCGATCATGGTCGAGGTGGTAGAGCTGCTAAAAGGAGAATCAAAAGAGAAGGTAGCTAAATTAGAAGATGATGAACTGTTCAAGAGCCATGAAGTAGACGCACAATCTACAGAAATAGCAGCTGGTGAAGATAGCTCAGAGTTCATATCAGAAGAAAAGGATTGA AAAAGAGAGAGAAAGTCAGACATGGAGGCGTGAAGAAGACTACAGGAGGCCATAGCTCTCTCTCTCTCTCTCTCTCCTCGTTTCTCTCTCTATAAATCGCTCTGGATCGCCCCTGTCTCAATCTCTCTGTCTCCAAAGCCTTACATTCGGCGAACTTTTTGACACCCAAAATCAAAATCAAAACCCCATTTCTTTTTTCCTCTTTTTTCAAATGATTGTTTCTTCCTCCTTCGCATCTCTCTCTTCTCCGTTGTTCAGACTGTGAGAAAATTAAGAAAGCGGAAGCTTAGTTTATTTACAGAGTAAGTGGGTTTCATTTGGCTCCGTTTTGATGGCCTTTCGCCTAATGTTCTGCTGTGGAATTGGTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTGTTTTCATTGAAGGAATTACACTCAGCCACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGAGGATTTGGTAGCGTTTATTGGGGTCAGCTATGGGACGGATCACAAATTGCAGTGAAGAGGTTGAAGGCTTGGAGCAACAAGGCAGACATGGAATTCTCTGTGGAAGTCGAGATACTGGCTCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGCGCCGAAGGGCAAGAACGCTTGATCGTGTACGACTACATGCCCAATCTAAGTCTACTCTCCCATTTACATGGACATCACGCATCAGAATGCCATCTCGATTGGAAACGTCGCATGAAAATCGCGGTTGGATCTGCCGAGGGAATTGCATCCAGCTTCGGCATTCTCCTTCTTGAGCTCGCCACTGGCAAGAGACCTCTTGAGAAGTCAAGTGCAACAACAAAACGCACAATCGTAGATTGGGCGTTACCGTTAGTAGTTGAGAAAAGGATTAACGAACTTGCAGACCCAAAGCTAAATGGAGATTACAACGCAGACGAGCTAAAGAGAGTCGTCCTTGTTGCACTCAGATGCTCCCATTCACGGCCAGAGAAACGACCGATCATGGTCGAGGTGGTAGAGCTGCTAAAAGGAGAATCAAAAGAGAAGGTAGCTAAATTAGAAGATGATGAACTGTTCAAGAGCCATGAAGTAGACGCACAATCTACAGAAATAGCAGCTGGTGAAGATAGCTCAGAGTTCATATCAGAAGAAAAGGATTGA ATGGCCTTTCGCCTAATGTTCTGCTGTGGAATTGGTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTGTTTTCATTGAAGGAATTACACTCAGCCACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGAGGATTTGGTAGCGTTTATTGGGGTCAGCTATGGGACGGATCACAAATTGCAGTGAAGAGGTTGAAGGCTTGGAGCAACAAGGCAGACATGGAATTCTCTGTGGAAGTCGAGATACTGGCTCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGCGCCGAAGGGCAAGAACGCTTGATCGTGTACGACTACATGCCCAATCTAAGTCTACTCTCCCATTTACATGGACATCACGCATCAGAATGCCATCTCGATTGGAAACGTCGCATGAAAATCGCGGTTGGATCTGCCGAGGGAATTGCATCCAGCTTCGGCATTCTCCTTCTTGAGCTCGCCACTGGCAAGAGACCTCTTGAGAAGTCAAGTGCAACAACAAAACGCACAATCGTAGATTGGGCGTTACCGTTAGTAGTTGAGAAAAGGATTAACGAACTTGCAGACCCAAAGCTAAATGGAGATTACAACGCAGACGAGCTAAAGAGAGTCGTCCTTGTTGCACTCAGATGCTCCCATTCACGGCCAGAGAAACGACCGATCATGGTCGAGGTGGTAGAGCTGCTAAAAGGAGAATCAAAAGAGAAGGTAGCTAAATTAGAAGATGATGAACTGTTCAAGAGCCATGAAGTAGACGCACAATCTACAGAAATAGCAGCTGGTGAAGATAGCTCAGAGTTCATATCAGAAGAAAAGGATTGA MAFRLMFCCGIGSDRKERGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKAWSNKADMEFSVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGHHASECHLDWKRRMKIAVGSAEGIASSFGILLLELATGKRPLEKSSATTKRTIVDWALPLVVEKRINELADPKLNGDYNADELKRVVLVALRCSHSRPEKRPIMVEVVELLKGESKEKVAKLEDDELFKSHEVDAQSTEIAAGEDSSEFISEEKD
BLAST of Carg06513-RA vs. NCBI nr
Match: XP_023528800.1 (PTI1-like tyrosine-protein kinase At3g15890 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 528.9 bits (1361), Expect = 1.1e-146 Identity = 280/355 (78.87%), Postives = 281/355 (79.15%), Query Frame = 0
BLAST of Carg06513-RA vs. NCBI nr
Match: XP_022955805.1 (PTI1-like tyrosine-protein kinase At3g15890 [Cucurbita moschata]) HSP 1 Score: 526.6 bits (1355), Expect = 5.4e-146 Identity = 279/355 (78.59%), Postives = 280/355 (78.87%), Query Frame = 0
BLAST of Carg06513-RA vs. NCBI nr
Match: XP_022980110.1 (PTI1-like tyrosine-protein kinase At3g15890 [Cucurbita maxima]) HSP 1 Score: 526.2 bits (1354), Expect = 7.0e-146 Identity = 278/355 (78.31%), Postives = 280/355 (78.87%), Query Frame = 0
BLAST of Carg06513-RA vs. NCBI nr
Match: XP_008454209.1 (PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Cucumis melo]) HSP 1 Score: 483.8 bits (1244), Expect = 4.0e-133 Identity = 254/355 (71.55%), Postives = 266/355 (74.93%), Query Frame = 0
BLAST of Carg06513-RA vs. NCBI nr
Match: XP_022153479.1 (PTI1-like tyrosine-protein kinase At3g15890 [Momordica charantia]) HSP 1 Score: 479.2 bits (1232), Expect = 9.8e-132 Identity = 252/355 (70.99%), Postives = 266/355 (74.93%), Query Frame = 0
BLAST of Carg06513-RA vs. TAIR10
Match: AT1G52540.1 (Protein kinase superfamily protein) HSP 1 Score: 333.2 bits (853), Expect = 1.6e-91 Identity = 181/348 (52.01%), Postives = 220/348 (63.22%), Query Frame = 0
BLAST of Carg06513-RA vs. TAIR10
Match: AT3G15890.1 (Protein kinase superfamily protein) HSP 1 Score: 325.5 bits (833), Expect = 3.3e-89 Identity = 171/349 (49.00%), Postives = 221/349 (63.32%), Query Frame = 0
BLAST of Carg06513-RA vs. TAIR10
Match: AT1G68690.1 (Protein kinase superfamily protein) HSP 1 Score: 161.8 bits (408), Expect = 6.3e-40 Identity = 107/332 (32.23%), Postives = 154/332 (46.39%), Query Frame = 0
BLAST of Carg06513-RA vs. TAIR10
Match: AT3G24540.1 (Protein kinase superfamily protein) HSP 1 Score: 158.7 bits (400), Expect = 5.3e-39 Identity = 97/290 (33.45%), Postives = 144/290 (49.66%), Query Frame = 0
BLAST of Carg06513-RA vs. TAIR10
Match: AT2G20300.1 (Protein kinase superfamily protein) HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38 Identity = 95/288 (32.99%), Postives = 137/288 (47.57%), Query Frame = 0
BLAST of Carg06513-RA vs. Swiss-Prot
Match: sp|Q9LSC2|Y3589_ARATH (PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 5.9e-88 Identity = 171/349 (49.00%), Postives = 221/349 (63.32%), Query Frame = 0
BLAST of Carg06513-RA vs. Swiss-Prot
Match: sp|Q9SX31|PERK9_ARATH (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38 Identity = 107/332 (32.23%), Postives = 154/332 (46.39%), Query Frame = 0
BLAST of Carg06513-RA vs. Swiss-Prot
Match: sp|Q1PEM5|PERK3_ARATH (Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana OX=3702 GN=PERK3 PE=2 SV=2) HSP 1 Score: 158.7 bits (400), Expect = 9.6e-38 Identity = 97/290 (33.45%), Postives = 144/290 (49.66%), Query Frame = 0
BLAST of Carg06513-RA vs. Swiss-Prot
Match: sp|Q8RWW0|ALE2_ARATH (Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=3702 GN=ALE2 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.1e-37 Identity = 95/288 (32.99%), Postives = 137/288 (47.57%), Query Frame = 0
BLAST of Carg06513-RA vs. Swiss-Prot
Match: sp|Q93ZS4|NIK3_ARATH (Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 4.8e-37 Identity = 101/289 (34.95%), Postives = 140/289 (48.44%), Query Frame = 0
BLAST of Carg06513-RA vs. TrEMBL
Match: tr|A0A1S3BYV2|A0A1S3BYV2_CUCME (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucumis melo OX=3656 GN=LOC103494685 PE=3 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 2.6e-133 Identity = 254/355 (71.55%), Postives = 266/355 (74.93%), Query Frame = 0
BLAST of Carg06513-RA vs. TrEMBL
Match: tr|A0A0A0KTN0|A0A0A0KTN0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006200 PE=3 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 5.5e-131 Identity = 249/355 (70.14%), Postives = 264/355 (74.37%), Query Frame = 0
BLAST of Carg06513-RA vs. TrEMBL
Match: tr|A0A2C9UYV5|A0A2C9UYV5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G057300 PE=3 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 1.0e-116 Identity = 222/355 (62.54%), Postives = 251/355 (70.70%), Query Frame = 0
BLAST of Carg06513-RA vs. TrEMBL
Match: tr|A0A067KLE8|A0A067KLE8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06127 PE=3 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 2.9e-116 Identity = 223/355 (62.82%), Postives = 250/355 (70.42%), Query Frame = 0
BLAST of Carg06513-RA vs. TrEMBL
Match: tr|A0A2K2B0W0|A0A2K2B0W0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G032100v3 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.2e-114 Identity = 220/342 (64.33%), Postives = 248/342 (72.51%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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