CSPI03G18850.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAAAGGAGACGATAACAATAATCTGAATCTCCAAAACAAACAATTGATTGAACAACCTATTTATATTTAGAGAGATAGATAAGAAATGGGTGAGGGAATAAGAGGCTGTTCAATGGTGGGGAAAGTGGTGTTTTGTTTGTTGTTGCTGCAACAATTGAAGATGGGTTATGCAACCATTTACAATGTTGGAGAAGAGCTTGGTTGGACCTTTAATGTCTCCTCTTGGCCCATTGGAAAGAACTTTCATGCTGGAGATATTCTTGGTATTTGCCTATTCTTTTCTGAATTCTCATGGCATTGGATCATAATTGGTGTTGACTGTTTAATGTCTTCCATGTTAATTTAAAGAAATAAATTTACTTATAAATATATAGAATTAAAAGCATTGTTAATTAATTTGTATGTTTAAAAAATGCAGCATTCAGCTACAACCCGTCGATGCACAATGTGGTAGTAGTTGACAAAGTGGGTTACAATTGGTGTTTGACCCATCCGATAGAAGCAACTGTTCATCGTTCAGGAAAGGATCAAATCAAGCTTGTTGAGGGCATGAATTATTATATCTGCAGCCGTCCTGGCCATTGTCAAATGGGAATGAAACTTGCTATTAATGCTACTTCTTGATCATATATATATCATTAATAATAAAAAAATTAATGAGCTTTATAT ATGGGTGAGGGAATAAGAGGCTGTTCAATGGTGGGGAAAGTGGTGTTTTGTTTGTTGTTGCTGCAACAATTGAAGATGGGTTATGCAACCATTTACAATGTTGGAGAAGAGCTTGGTTGGACCTTTAATGTCTCCTCTTGGCCCATTGGAAAGAACTTTCATGCTGGAGATATTCTTGCATTCAGCTACAACCCGTCGATGCACAATGTGGTAGTAGTTGACAAAGTGGGTTACAATTGGTGTTTGACCCATCCGATAGAAGCAACTGTTCATCGTTCAGGAAAGGATCAAATCAAGCTTGTTGAGGGCATGAATTATTATATCTGCAGCCGTCCTGGCCATTGTCAAATGGGAATGAAACTTGCTATTAATGCTACTTCTTGA ATGGGTGAGGGAATAAGAGGCTGTTCAATGGTGGGGAAAGTGGTGTTTTGTTTGTTGTTGCTGCAACAATTGAAGATGGGTTATGCAACCATTTACAATGTTGGAGAAGAGCTTGGTTGGACCTTTAATGTCTCCTCTTGGCCCATTGGAAAGAACTTTCATGCTGGAGATATTCTTGCATTCAGCTACAACCCGTCGATGCACAATGTGGTAGTAGTTGACAAAGTGGGTTACAATTGGTGTTTGACCCATCCGATAGAAGCAACTGTTCATCGTTCAGGAAAGGATCAAATCAAGCTTGTTGAGGGCATGAATTATTATATCTGCAGCCGTCCTGGCCATTGTCAAATGGGAATGAAACTTGCTATTAATGCTACTTCTTGA
BLAST of CSPI03G18850.1 vs. Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 9.6e-30 Identity = 58/95 (61.05%), Postives = 72/95 (75.79%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.9e-26 Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2) HSP 1 Score: 116.7 bits (291), Expect = 1.9e-25 Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 6.7e-15 Identity = 39/100 (39.00%), Postives = 54/100 (54.00%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12 Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TrEMBL
Match: A0A0A0L6J3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214590 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 1.6e-71 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TrEMBL
Match: A0A0A0LC13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G215590 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 3.4e-34 Identity = 73/126 (57.94%), Postives = 95/126 (75.40%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TrEMBL
Match: M5VJM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018507mg PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 4.2e-32 Identity = 70/125 (56.00%), Postives = 86/125 (68.80%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TrEMBL
Match: W9SBG7_9ROSA (Basic blue protein OS=Morus notabilis GN=L484_024185 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 6.0e-31 Identity = 66/125 (52.80%), Postives = 83/125 (66.40%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TrEMBL
Match: B9GEY2_POPTR (Basic blue copper family protein OS=Populus trichocarpa GN=POPTR_0001s21660g PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 7.9e-31 Identity = 70/122 (57.38%), Postives = 86/122 (70.49%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TAIR10
Match: AT2G02850.1 (AT2G02850.1 plantacyanin) HSP 1 Score: 116.7 bits (291), Expect = 1.1e-26 Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein) HSP 1 Score: 81.3 bits (199), Expect = 4.9e-16 Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TAIR10
Match: AT1G17800.1 (AT1G17800.1 early nodulin-like protein 22) HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14 Identity = 44/115 (38.26%), Postives = 63/115 (54.78%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17) HSP 1 Score: 74.3 bits (181), Expect = 6.0e-14 Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19) HSP 1 Score: 71.2 bits (173), Expect = 5.1e-13 Identity = 38/121 (31.40%), Postives = 60/121 (49.59%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. NCBI nr
Match: gi|449464514|ref|XP_004149974.1| (PREDICTED: basic blue protein-like [Cucumis sativus]) HSP 1 Score: 276.6 bits (706), Expect = 2.3e-71 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. NCBI nr
Match: gi|659112156|ref|XP_008456091.1| (PREDICTED: basic blue protein-like [Cucumis melo]) HSP 1 Score: 248.4 bits (633), Expect = 6.6e-63 Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. NCBI nr
Match: gi|659131262|ref|XP_008465594.1| (PREDICTED: basic blue protein-like [Cucumis melo]) HSP 1 Score: 153.7 bits (387), Expect = 2.2e-34 Identity = 74/126 (58.73%), Postives = 95/126 (75.40%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. NCBI nr
Match: gi|449464494|ref|XP_004149964.1| (PREDICTED: basic blue protein-like [Cucumis sativus]) HSP 1 Score: 152.5 bits (384), Expect = 4.9e-34 Identity = 73/126 (57.94%), Postives = 95/126 (75.40%), Query Frame = 1
BLAST of CSPI03G18850.1 vs. NCBI nr
Match: gi|595792743|ref|XP_007200120.1| (hypothetical protein PRUPE_ppa018507mg [Prunus persica]) HSP 1 Score: 145.6 bits (366), Expect = 6.0e-32 Identity = 70/125 (56.00%), Postives = 86/125 (68.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
|