CSPI01G34430.2 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTGATTCCTTCACTGCTTTCACCTTTTGGAAACCAACGAGCCTTTCAGGTCCCTCTCTCGCCGACGCTGTTCTATTGATTTTTTTTTTTTGTCTATTGTATTTTGATTCCACTATGAGCCTTCTGCGCATTCTCTGTTTTTTTTTTTTTTCTTTTTCTGTTGAAACTTAGATCTTTAGAGAACTATTTGAATTTAGGGTATTGAATTGGCAGTGTAGTGATCCACAGTCTTGCATTTGCTTAGGTTTTTCTTCGTTTTCTTTTCATTTGTGTGTGTGTGTGTGTGTGTTTTTTTTTTGATTTGATGATTGCTTATTGATCGTTATACTTAAGCGGATTTAATTTGATGTGAATCGAGGGGATGGGGTTTTATGATTTCTTGTGTTAGTACCTGGAAAAGTTGAAGTTATAATCTGGTTCTAATTATATACATCTTCATCAATACGACATTATTACACCCACAACATTTTACCAAAAAAATTAAGTTTTAATACGTTAACCAATAGTTGGAACCTTTTACTGGCGTATGCACTGGGACGCTTGTTCACTCTAACACATAACAGAAGTATAAAGAGTTGAAGAAATTGGGATGATGAAGAAAATTACGGCTGGATTCGTGTGAGGGAGGAAACAATTAGAGGGTTTTCAATTTCAACAGAGCAAAATCAGAGAGAGAGAGATAGCACAAGGATGAGATGCAATGAAGGATGTTTTGTTTTCACCTAGGGTGGTAAAGAGAAATCCTCTGGGAGCATTTTTTCGTTGTCAACCTATCATTTGCATCAGTTTTAATAAGTGTGTAGGTGAATAATTGGTAGGCTTGCTGGTTTTACTAGTGCCAAATCAAAGGGAGAACAATCTCCTGCCTTGTTGGGGGTCAGTTATCCTGGTGTTCATTGTCGAACTACACCAATCTTTCTGATTTTTTATTTTTTATTTTTTGTCTTTTTTCTTCAAGTTACATGATTACCCTTTATTTTCTTATCCAGTGTTTAGATTTTATGCATTATAGTTTTTGGAATTGACAGCTTTTCATTCAGATAATTAATGGGGGTTAATATGGAGAATAGTGCGCATGGGACTGTACCAGAGTGTGGTGCAATTTTTATGTCAAATTGTGTGACCAGAGCAGAATGCTTCAGAAGGAAGTTATTTGGTCTTCCATATTGGTTAGGCGACTTTGTGCTACAAATTAAATCTGGGATGATTTTATTTCTGTTTGAATACGAGAATAGAGTGCTTCATGGTGTATTTCAGGCAACTTCAGATGGTGCAATGAACATTGTGCCCCATGCTTATAGCTCATCAGGGCAGAAATTCCCTGCCCAGGTAATGCATATGTGCATAACATTTTCACGTTGTTAAATTTTCTGGTCTAAGACTTCGTTCCTTCTTTCTAATTGCTATTGTTAGGTTAAGTTCTCTATACTTTGGTCCTGCAATCCAATTTTCGAAGATCGCTTTCAAAGTGCCATAAAAGACAATTACTTTTCAGCTAAGAAATTCAACTTTGGGCTATCTAGAATGCAGGTCTGTTATTTTCCATTTTATTGTTGGATCGTTATGATTCATTGCCTACTCAAAATTTCTCTTTGTGCTTGATTCAATATGTAGGTTCATAGGCTTTTATCTCTGTTTAGTTTGACAAAATTTAGTGATCAACTCCATACGAGACAGTTAAGCAGTGATCCATTCGAGTGTTCAAGTGATTACTTGATTTGTGAAAGCCAAAGTGTTGCTGATGGTAATGGGCCTATATTGAATGAGAGGTTACAAGGGAAACTAATGGAGGGTGAAGACCAAGTTAATTCTATGCAGGAAAGTGCTCCTCTTTCCCATTATAATATCAGAAATATAATTCCTACCAAAGAAAGTGCAGTATACTGTCCTTATATGGTTACCAGAAACCCCACCTGTAGTTCTGGTTGCCTAGGCGGGGCTCAAATCACAACGCCCAGCCTCCACAGCCAATCAGACTGCATGAATAGCATGGCTCTCCAACCATCTGTATATTTTGAAAACATTACAGTTCCTTCTATAACTCAAAGTCAAATAAATGTGTCATGTTCTAATCCTAACTTACTTCCTTTGCCTATACGAGAGTTTGAACATGATGGAAGCTTGAGAAGGTCTATCGTAACTAGCGAGTACCCGTCCAATGGACTGAATGATTCCTTTTTCTCATATCAGAATGAGCAGGGCTTAACAAGGCAGGAAAACATGGAAATATATGTTCCTGTGACAAAAGAATTTCCCAGTCAATTACCTTTTGATTCTGTTGTAGTTTCAAGCATGCCCTCGATTGAGCATACAGCAGCGAACCATGGACAGGAGTGCTATGGATCTTCCAAAAGCATATATTCTGATCGTGAAAGAAAGGGCAATGTGTTTTCTCGCTTATCCTATCCATCTGATGCAAGCCTACAAGAATATAATGGCTGCAATCATGAGATGCTTTTTCTTGATCCATCTATTCTTGAAGTTAGCGGGCAATGGAAGAAAACTGACCATGAAGTGCCACGTCCAAAACCCAATGCTGGTCGGAACTTTGTGAAGAAAAAATGCACAAAATCTTTGTTAAGTTCATATAGTAATTGCTTTCAAGTGTCAGATGAACATGGGGCAATTAATGAGGACAGTATAGGTGGTAACAGTGACCATAGTGCTATAGAGATTCCATTTGTGAATTTCAAGCGGCGAAGGAAACATCTCAAAGTTGAGCACTGCACCCCAACTGGAGGGGAATTGTCAGGTCTGCAACAGAAAAGAAAAAAGTTGATTCGACCGAGCTTTGCCTGTAGTGAGTTGCATGATTCTGGAGATACCAACATTGTTTCCCCAAGTTTATGTGGACCGAGCTTTGCCTGTAGTGAGTTGGATGAATCTGGAGATACCAACAGTATTTTCACAAGTTCAGGAGGCATGTCAATGGTTAGAGTCTTACGAGGAAAGTCTAATATCAATCATATAAATGAAACAGATAAGGCAGAGAAATTATATCCAGCTGTTGAATTGCCAGATACTATTTGGCTTGTTGATGACGACGAAAAGAATATTGATATTGAAACTGTAGCGACAGCCGAGAATTGTTGCGAATTGAATAAAATCTCTGAAGATAAGATAGCATCCTCAAATTATATTAGTATCAGTGACCTAAATATTACCTCTAAAGATCTTATTGTAAAGGAGAGTTGTAAAAGTACTCATAATTGTTCAACTTCAGAGAATCACATGAAGTTCCAAAATCTGAATAATTCTGGTTTATGTCGACAAGAGTTGTCCTTGGAAAGTTCTGAAGTAAATACTGGGAATAGTTTTATAAGGTTTAATGAAGGTGGCAATAGATGCAATGCAAAGGAGTTAATTTTAAGTGTGAAAATTGCCGAACCATTTCATGGTCCTGTAGCTGTGATAGAAAGCTCAGTTAAAAGCTCAAGACCTTTGAACTCAGACTCTGAAAGTGCTTCTGAAGATATTATTGAGAGAAGGTAG ATGGGGGTTAATATGGAGAATAGTGCGCATGGGACTGTACCAGAGTGTGGTGCAATTTTTATGTCAAATTGTGTGACCAGAGCAGAATGCTTCAGAAGGAAGTTATTTGGTCTTCCATATTGGTTAGGCGACTTTGTGCTACAAATTAAATCTGGGATGATTTTATTTCTGTTTGAATACGAGAATAGAGTGCTTCATGGTGTATTTCAGGCAACTTCAGATGGTGCAATGAACATTGTGCCCCATGCTTATAGCTCATCAGGGCAGAAATTCCCTGCCCAGGTTAAGTTCTCTATACTTTGGTCCTGCAATCCAATTTTCGAAGATCGCTTTCAAAGTGCCATAAAAGACAATTACTTTTCAGCTAAGAAATTCAACTTTGGGCTATCTAGAATGCAGGTTCATAGGCTTTTATCTCTGTTTAGTTTGACAAAATTTAGTGATCAACTCCATACGAGACAGTTAAGCAGTGATCCATTCGAGTGTTCAAGTGATTACTTGATTTGTGAAAGCCAAAGTGTTGCTGATGGTAATGGGCCTATATTGAATGAGAGGTTACAAGGGAAACTAATGGAGGGTGAAGACCAAGTTAATTCTATGCAGGAAAGTGCTCCTCTTTCCCATTATAATATCAGAAATATAATTCCTACCAAAGAAAGTGCAGTATACTGTCCTTATATGGTTACCAGAAACCCCACCTGTAGTTCTGGTTGCCTAGGCGGGGCTCAAATCACAACGCCCAGCCTCCACAGCCAATCAGACTGCATGAATAGCATGGCTCTCCAACCATCTGTATATTTTGAAAACATTACAGTTCCTTCTATAACTCAAAGTCAAATAAATGTGTCATGTTCTAATCCTAACTTACTTCCTTTGCCTATACGAGAGTTTGAACATGATGGAAGCTTGAGAAGGTCTATCGTAACTAGCGAGTACCCGTCCAATGGACTGAATGATTCCTTTTTCTCATATCAGAATGAGCAGGGCTTAACAAGGCAGGAAAACATGGAAATATATGTTCCTGTGACAAAAGAATTTCCCAGTCAATTACCTTTTGATTCTGTTGTAGTTTCAAGCATGCCCTCGATTGAGCATACAGCAGCGAACCATGGACAGGAGTGCTATGGATCTTCCAAAAGCATATATTCTGATCGTGAAAGAAAGGGCAATGTGTTTTCTCGCTTATCCTATCCATCTGATGCAAGCCTACAAGAATATAATGGCTGCAATCATGAGATGCTTTTTCTTGATCCATCTATTCTTGAAGTTAGCGGGCAATGGAAGAAAACTGACCATGAAGTGCCACGTCCAAAACCCAATGCTGGTCGGAACTTTGTGAAGAAAAAATGCACAAAATCTTTGTTAAGTTCATATAGTAATTGCTTTCAAGTGTCAGATGAACATGGGGCAATTAATGAGGACAGTATAGGTGGTAACAGTGACCATAGTGCTATAGAGATTCCATTTGTGAATTTCAAGCGGCGAAGGAAACATCTCAAAGTTGAGCACTGCACCCCAACTGGAGGGGAATTGTCAGGTCTGCAACAGAAAAGAAAAAAGTTGATTCGACCGAGCTTTGCCTGTAGTGAGTTGCATGATTCTGGAGATACCAACATTGTTTCCCCAAGTTTATGTGGACCGAGCTTTGCCTGTAGTGAGTTGGATGAATCTGGAGATACCAACAGTATTTTCACAAGTTCAGGAGGCATGTCAATGGTTAGAGTCTTACGAGGAAAGTCTAATATCAATCATATAAATGAAACAGATAAGGCAGAGAAATTATATCCAGCTGTTGAATTGCCAGATACTATTTGGCTTGTTGATGACGACGAAAAGAATATTGATATTGAAACTGTAGCGACAGCCGAGAATTGTTGCGAATTGAATAAAATCTCTGAAGATAAGATAGCATCCTCAAATTATATTAGTATCAGTGACCTAAATATTACCTCTAAAGATCTTATTGTAAAGGAGAGTTGTAAAAGTACTCATAATTGTTCAACTTCAGAGAATCACATGAAGTTCCAAAATCTGAATAATTCTGGTTTATGTCGACAAGAGTTGTCCTTGGAAAGTTCTGAAGTAAATACTGGGAATAGTTTTATAAGGTTTAATGAAGGTGGCAATAGATGCAATGCAAAGGAGTTAATTTTAAGTGTGAAAATTGCCGAACCATTTCATGGTCCTGTAGCTGTGATAGAAAGCTCAGTTAAAAGCTCAAGACCTTTGAACTCAGACTCTGAAAGTGCTTCTGAAGATATTATTGAGAGAAGGTAG ATGGGGGTTAATATGGAGAATAGTGCGCATGGGACTGTACCAGAGTGTGGTGCAATTTTTATGTCAAATTGTGTGACCAGAGCAGAATGCTTCAGAAGGAAGTTATTTGGTCTTCCATATTGGTTAGGCGACTTTGTGCTACAAATTAAATCTGGGATGATTTTATTTCTGTTTGAATACGAGAATAGAGTGCTTCATGGTGTATTTCAGGCAACTTCAGATGGTGCAATGAACATTGTGCCCCATGCTTATAGCTCATCAGGGCAGAAATTCCCTGCCCAGGTTAAGTTCTCTATACTTTGGTCCTGCAATCCAATTTTCGAAGATCGCTTTCAAAGTGCCATAAAAGACAATTACTTTTCAGCTAAGAAATTCAACTTTGGGCTATCTAGAATGCAGGTTCATAGGCTTTTATCTCTGTTTAGTTTGACAAAATTTAGTGATCAACTCCATACGAGACAGTTAAGCAGTGATCCATTCGAGTGTTCAAGTGATTACTTGATTTGTGAAAGCCAAAGTGTTGCTGATGGTAATGGGCCTATATTGAATGAGAGGTTACAAGGGAAACTAATGGAGGGTGAAGACCAAGTTAATTCTATGCAGGAAAGTGCTCCTCTTTCCCATTATAATATCAGAAATATAATTCCTACCAAAGAAAGTGCAGTATACTGTCCTTATATGGTTACCAGAAACCCCACCTGTAGTTCTGGTTGCCTAGGCGGGGCTCAAATCACAACGCCCAGCCTCCACAGCCAATCAGACTGCATGAATAGCATGGCTCTCCAACCATCTGTATATTTTGAAAACATTACAGTTCCTTCTATAACTCAAAGTCAAATAAATGTGTCATGTTCTAATCCTAACTTACTTCCTTTGCCTATACGAGAGTTTGAACATGATGGAAGCTTGAGAAGGTCTATCGTAACTAGCGAGTACCCGTCCAATGGACTGAATGATTCCTTTTTCTCATATCAGAATGAGCAGGGCTTAACAAGGCAGGAAAACATGGAAATATATGTTCCTGTGACAAAAGAATTTCCCAGTCAATTACCTTTTGATTCTGTTGTAGTTTCAAGCATGCCCTCGATTGAGCATACAGCAGCGAACCATGGACAGGAGTGCTATGGATCTTCCAAAAGCATATATTCTGATCGTGAAAGAAAGGGCAATGTGTTTTCTCGCTTATCCTATCCATCTGATGCAAGCCTACAAGAATATAATGGCTGCAATCATGAGATGCTTTTTCTTGATCCATCTATTCTTGAAGTTAGCGGGCAATGGAAGAAAACTGACCATGAAGTGCCACGTCCAAAACCCAATGCTGGTCGGAACTTTGTGAAGAAAAAATGCACAAAATCTTTGTTAAGTTCATATAGTAATTGCTTTCAAGTGTCAGATGAACATGGGGCAATTAATGAGGACAGTATAGGTGGTAACAGTGACCATAGTGCTATAGAGATTCCATTTGTGAATTTCAAGCGGCGAAGGAAACATCTCAAAGTTGAGCACTGCACCCCAACTGGAGGGGAATTGTCAGGTCTGCAACAGAAAAGAAAAAAGTTGATTCGACCGAGCTTTGCCTGTAGTGAGTTGCATGATTCTGGAGATACCAACATTGTTTCCCCAAGTTTATGTGGACCGAGCTTTGCCTGTAGTGAGTTGGATGAATCTGGAGATACCAACAGTATTTTCACAAGTTCAGGAGGCATGTCAATGGTTAGAGTCTTACGAGGAAAGTCTAATATCAATCATATAAATGAAACAGATAAGGCAGAGAAATTATATCCAGCTGTTGAATTGCCAGATACTATTTGGCTTGTTGATGACGACGAAAAGAATATTGATATTGAAACTGTAGCGACAGCCGAGAATTGTTGCGAATTGAATAAAATCTCTGAAGATAAGATAGCATCCTCAAATTATATTAGTATCAGTGACCTAAATATTACCTCTAAAGATCTTATTGTAAAGGAGAGTTGTAAAAGTACTCATAATTGTTCAACTTCAGAGAATCACATGAAGTTCCAAAATCTGAATAATTCTGGTTTATGTCGACAAGAGTTGTCCTTGGAAAGTTCTGAAGTAAATACTGGGAATAGTTTTATAAGGTTTAATGAAGGTGGCAATAGATGCAATGCAAAGGAGTTAATTTTAAGTGTGAAAATTGCCGAACCATTTCATGGTCCTGTAGCTGTGATAGAAAGCTCAGTTAAAAGCTCAAGACCTTTGAACTCAGACTCTGAAAGTGCTTCTGAAGATATTATTGAGAGAAGGTAG
BLAST of CSPI01G34430.2 vs. Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 6.7e-14 Identity = 50/133 (37.59%), Postives = 69/133 (51.88%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TrEMBL
Match: A0A0A0LYB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701950 PE=4 SV=1) HSP 1 Score: 1511.9 bits (3913), Expect = 0.0e+00 Identity = 751/758 (99.08%), Postives = 753/758 (99.34%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TrEMBL
Match: V4UCP8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014264mg PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.8e-50 Identity = 105/175 (60.00%), Postives = 124/175 (70.86%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TrEMBL
Match: A0A0D2UMH9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G048800 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 1.7e-48 Identity = 102/184 (55.43%), Postives = 130/184 (70.65%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TrEMBL
Match: A0A0B0MPA4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_09326 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 3.8e-48 Identity = 101/184 (54.89%), Postives = 130/184 (70.65%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TrEMBL
Match: M5X5M8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026440mg PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47 Identity = 103/185 (55.68%), Postives = 127/185 (68.65%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TAIR10
Match: AT2G35140.1 (AT2G35140.1 DCD (Development and Cell Death) domain protein) HSP 1 Score: 177.2 bits (448), Expect = 3.9e-44 Identity = 86/138 (62.32%), Postives = 104/138 (75.36%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TAIR10
Match: AT5G61910.1 (AT5G61910.1 DCD (Development and Cell Death) domain protein) HSP 1 Score: 107.5 bits (267), Expect = 3.8e-23 Identity = 61/140 (43.57%), Postives = 86/140 (61.43%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TAIR10
Match: AT2G32910.1 (AT2G32910.1 DCD (Development and Cell Death) domain protein) HSP 1 Score: 105.5 bits (262), Expect = 1.4e-22 Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TAIR10
Match: AT3G11000.2 (AT3G11000.2 DCD (Development and Cell Death) domain protein) HSP 1 Score: 102.1 bits (253), Expect = 1.6e-21 Identity = 54/129 (41.86%), Postives = 74/129 (57.36%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. TAIR10
Match: AT5G01660.1 (AT5G01660.1 Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915)) HSP 1 Score: 99.8 bits (247), Expect = 7.9e-21 Identity = 53/134 (39.55%), Postives = 77/134 (57.46%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. NCBI nr
Match: gi|778664537|ref|XP_011660310.1| (PREDICTED: uncharacterized protein LOC105436360 isoform X1 [Cucumis sativus]) HSP 1 Score: 1511.9 bits (3913), Expect = 0.0e+00 Identity = 751/758 (99.08%), Postives = 753/758 (99.34%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. NCBI nr
Match: gi|778664541|ref|XP_011660311.1| (PREDICTED: uncharacterized protein LOC105436360 isoform X2 [Cucumis sativus]) HSP 1 Score: 1365.5 bits (3533), Expect = 0.0e+00 Identity = 682/698 (97.71%), Postives = 686/698 (98.28%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. NCBI nr
Match: gi|659118270|ref|XP_008459033.1| (PREDICTED: uncharacterized protein LOC103498262 isoform X1 [Cucumis melo]) HSP 1 Score: 1331.6 bits (3445), Expect = 0.0e+00 Identity = 677/758 (89.31%), Postives = 700/758 (92.35%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. NCBI nr
Match: gi|659118274|ref|XP_008459035.1| (PREDICTED: uncharacterized protein LOC103498262 isoform X2 [Cucumis melo]) HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00 Identity = 613/698 (87.82%), Postives = 638/698 (91.40%), Query Frame = 1
BLAST of CSPI01G34430.2 vs. NCBI nr
Match: gi|567912783|ref|XP_006448705.1| (hypothetical protein CICLE_v10014264mg [Citrus clementina]) HSP 1 Score: 209.1 bits (531), Expect = 2.6e-50 Identity = 105/175 (60.00%), Postives = 124/175 (70.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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