MELO3C034578.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034578.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr11 : 2330495 .. 2330665 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACGAGCTCGCCAGAAGTGGAATCGCAGGAGGATTTGGGGAATTTGAGATGGGGTTTTGAAGGAGAATTTGGGGGAATGCAGGTTTGTGGGGTTTGGAGGAAGAGGAAGATGAGGATGAGAGTGGCAATGGCAATAGAAGCAAATGAAAGCTTATTGAGAAAGTAG

mRNA sequence

ATGGAGACGAGCTCGCCAGAAGTGGAATCGCAGGAGGATTTGGGGAATTTGAGATGGGGTTTTGAAGGAGAATTTGGGGGAATGCAGGTTTGTGGGGTTTGGAGGAAGAGGAAGATGAGGATGAGAGTGGCAATGGCAATAGAAGCAAATGAAAGCTTATTGAGAAAGTAG

Coding sequence (CDS)

ATGGAGACGAGCTCGCCAGAAGTGGAATCGCAGGAGGATTTGGGGAATTTGAGATGGGGTTTTGAAGGAGAATTTGGGGGAATGCAGGTTTGTGGGGTTTGGAGGAAGAGGAAGATGAGGATGAGAGTGGCAATGGCAATAGAAGCAAATGAAAGCTTATTGAGAAAGTAG

Protein sequence

METSSPEVESQEDLGNLRWGFEGEFGGMQVCGVWRKRKMRMRVAMAIEANESLLRK
Homology
[Close]
BLAST of MELO3C034578.2 vs. NCBI nr
Match: AFK44642.1 (unknown [Medicago truncatula])

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-04
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 0 

Query: 7  EVESQEDLGNLRWGFEGEFGGMQVCGVWRKRKMRMRVAMAIEANESLLR 56
          EV+SQ DLG  +WGF G  GG  V GV R R M +  AMAIEA ES LR
Sbjct: 50 EVKSQVDLGKRKWGFNGASGGTHVSGVIRNRDMSVTEAMAIEAMESFLR 98

[Close]
BLAST of MELO3C034578.2 vs. TrEMBL
Match: tr|I3SWK0|I3SWK0_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-04
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 0 

Query: 7  EVESQEDLGNLRWGFEGEFGGMQVCGVWRKRKMRMRVAMAIEANESLLR 56
          EV+SQ DLG  +WGF G  GG  V GV R R M +  AMAIEA ES LR
Sbjct: 50 EVKSQVDLGKRKWGFNGASGGTHVSGVIRNRDMSVTEAMAIEAMESFLR 98

The following BLAST results are available for this feature:
BLAST of MELO3C034578.2 vs. NCBI nr
Match NameE-valueIdentityDescription
AFK44642.11.5e-0459.18unknown [Medicago truncatula][more]
BLAST of MELO3C034578.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034578.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034578.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|I3SWK0|I3SWK0_MEDTR1.0e-0459.18Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034578.2.1MELO3C034578.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034578.2Wild cucumber (PI 183967)cpimedB263
MELO3C034578.2Cucumber (Chinese Long) v2cumedB263
MELO3C034578.2Bottle gourd (USVL1VR-Ls)lsimedB448