MELO3C034284.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034284.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionSerine/threonine-protein phosphatase 7 long form homolog
Locationchr10 : 23498879 .. 23499276 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAATTGGACACCATACACGTCCGACATTATGGCATCGCTTCCTGTTAGATGTCAGAGTGGTCAAGCGGCTTGGACTTAGTGGATCCATTGATTTGTTTCCATTTGGTCGAGAAACATCAACCAGATCGCGTGTTGCGATAGTTTAATATGTTGCAAATGCCACCAGCGATTAGCTACATTGATCAGAGGTTGCATCAAATAGATTTAAGGGGTAAACATGATCAAGATTGGCGTCGGATTCATGCGGAACATATCGGGGTGTGGAATTTGCGATATGATTTTCAGGTTGAAGCACCCACCACAAGCGAACCGACGACATCAGAGAACTATTTTGTTTGGTACAAGTCGATTACCAGATGCTTTATCACCTAAGATGGCGCTTTCTATCATTGCATG

mRNA sequence

ATTAATTGGACACCATACACGTCCGACATTATGGCATCGCTTCCTGTTAGATGTCAGAGTGGTCAAGCGGCTTGGACTTAGTGGATCCATTGATTTGTTTCCATTTGGTCGAGAAACATCAACCAGATCGCGTGTTGCGATAGTTTAATATGTTGCAAATGCCACCAGCGATTAGCTACATTGATCAGAGGTTGCATCAAATAGATTTAAGGGGTAAACATGATCAAGATTGGCGTCGGATTCATGCGGAACATATCGGGGTGTGGAATTTGCGATATGATTTTCAGGTTGAAGCACCCACCACAAGCGAACCGACGACATCAGAGAACTATTTTGTTTGGTACAAGTCGATTACCAGATGCTTTATCACCTAAGATGGCGCTTTCTATCATTGCATG

Coding sequence (CDS)

ATGTTGCAAATGCCACCAGCGATTAGCTACATTGATCAGAGGTTGCATCAAATAGATTTAAGGGGTAAACATGATCAAGATTGGCGTCGGATTCATGCGGAACATATCGGGGTGTGGAATTTGCGATATGATTTTCAGGTTGAAGCACCCACCACAAGCGAACCGACGACATCAGAGAACTATTTTGTTTGGTACAAGTCGATTACCAGATGCTTTATCACCTAA

Protein sequence

MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRYDFQVEAPTTSEPTTSENYFVWYKSITRCFIT
Homology
[Close]
BLAST of MELO3C034284.2 vs. NCBI nr
Match: XP_016903693.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 4.4e-31
Identity = 66/74 (89.19%), Postives = 67/74 (90.54%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRYDFQVEAPTTSEPTTSEN 60
           MLQ PPAISY DQRLHQIDLRGK DQDWRRIHAEHIGVWN RYDF VEAPTTSEPT SEN
Sbjct: 41  MLQTPPAISYTDQRLHQIDLRGKRDQDWRRIHAEHIGVWNSRYDFWVEAPTTSEPTVSEN 100

Query: 61  YFVWYKSITRCFIT 75
           YFVWY+SITR FIT
Sbjct: 101 YFVWYRSITRRFIT 114

[Close]
BLAST of MELO3C034284.2 vs. NCBI nr
Match: XP_008441625.1 (PREDICTED: probable metal-nicotianamine transporter YSL7 [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRYDFQVEAPTTSEPTTSEN 60
           +LQMPP  S+ +  LHQI+LRGKHDQDW RIHAEHI +W+L+ +F+VEA  T E T S++
Sbjct: 577 ILQMPPEFSFTNLTLHQINLRGKHDQDWYRIHAEHIAMWHLQNNFRVEAIATHELTVSDD 636

Query: 61  YFVWYKSITRCFIT 75
           YF+WY SITR FIT
Sbjct: 637 YFLWYSSITRHFIT 650

[Close]
BLAST of MELO3C034284.2 vs. NCBI nr
Match: ADN34080.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-14
Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRY 44
           MLQ PPAISY DQRLHQID +GKHDQDWRRIHAEHIGVWN RY
Sbjct: 200 MLQTPPAISYTDQRLHQIDFKGKHDQDWRRIHAEHIGVWNSRY 242

[Close]
BLAST of MELO3C034284.2 vs. NCBI nr
Match: XP_008459571.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis melo])

HSP 1 Score: 86.3 bits (212), Expect = 4.9e-14
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRYDFQVEAPTTSEPTTSEN 60
           M Q  P+    +  LH+IDLRGKHDQDW +IH E+I  W+ R +F V+   T+EPT S++
Sbjct: 347 MHQPLPSFCNTNPALHRIDLRGKHDQDWCKIHVEYITKWHSRNEFCVKGVATNEPTVSDD 406

Query: 61  YFVWYKSITRCFIT 75
           YF WY SITR FIT
Sbjct: 407 YFSWYSSITRRFIT 420

[Close]
BLAST of MELO3C034284.2 vs. NCBI nr
Match: XP_016902435.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis melo])

HSP 1 Score: 86.3 bits (212), Expect = 4.9e-14
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRYDFQVEAPTTSEPTTSEN 60
           M Q  P+    +  LH+IDLRGKHDQDW +IH E+I  W+ R +F V+   T+EPT S++
Sbjct: 365 MHQPLPSFCNTNPALHRIDLRGKHDQDWCKIHVEYITKWHSRNEFCVKGVATNEPTVSDD 424

Query: 61  YFVWYKSITRCFIT 75
           YF WY SITR FIT
Sbjct: 425 YFSWYSSITRRFIT 438

[Close]
BLAST of MELO3C034284.2 vs. TrEMBL
Match: tr|A0A1S4E636|A0A1S4E636_CUCME (serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656 GN=LOC107992364 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.9e-31
Identity = 66/74 (89.19%), Postives = 67/74 (90.54%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRYDFQVEAPTTSEPTTSEN 60
           MLQ PPAISY DQRLHQIDLRGK DQDWRRIHAEHIGVWN RYDF VEAPTTSEPT SEN
Sbjct: 41  MLQTPPAISYTDQRLHQIDLRGKRDQDWRRIHAEHIGVWNSRYDFWVEAPTTSEPTVSEN 100

Query: 61  YFVWYKSITRCFIT 75
           YFVWY+SITR FIT
Sbjct: 101 YFVWYRSITRRFIT 114

[Close]
BLAST of MELO3C034284.2 vs. TrEMBL
Match: tr|A0A1S3B4L0|A0A1S3B4L0_CUCME (probable metal-nicotianamine transporter YSL7 OS=Cucumis melo OX=3656 GN=LOC103485705 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.7e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRYDFQVEAPTTSEPTTSEN 60
           +LQMPP  S+ +  LHQI+LRGKHDQDW RIHAEHI +W+L+ +F+VEA  T E T S++
Sbjct: 577 ILQMPPEFSFTNLTLHQINLRGKHDQDWYRIHAEHIAMWHLQNNFRVEAIATHELTVSDD 636

Query: 61  YFVWYKSITRCFIT 75
           YF+WY SITR FIT
Sbjct: 637 YFLWYSSITRHFIT 650

[Close]
BLAST of MELO3C034284.2 vs. TrEMBL
Match: tr|E5GC81|E5GC81_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.5e-15
Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRY 44
           MLQ PPAISY DQRLHQID +GKHDQDWRRIHAEHIGVWN RY
Sbjct: 200 MLQTPPAISYTDQRLHQIDFKGKHDQDWRRIHAEHIGVWNSRY 242

[Close]
BLAST of MELO3C034284.2 vs. TrEMBL
Match: tr|A0A1S4E383|A0A1S4E383_CUCME (serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.2e-14
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRYDFQVEAPTTSEPTTSEN 60
           M Q  P+    +  LH+IDLRGKHDQDW +IH E+I  W+ R +F V+   T+EPT S++
Sbjct: 365 MHQPLPSFCNTNPALHRIDLRGKHDQDWCKIHVEYITKWHSRNEFCVKGVATNEPTVSDD 424

Query: 61  YFVWYKSITRCFIT 75
           YF WY SITR FIT
Sbjct: 425 YFSWYSSITRRFIT 438

[Close]
BLAST of MELO3C034284.2 vs. TrEMBL
Match: tr|A0A1S3CBQ7|A0A1S3CBQ7_CUCME (serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.2e-14
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 0 

Query: 1   MLQMPPAISYIDQRLHQIDLRGKHDQDWRRIHAEHIGVWNLRYDFQVEAPTTSEPTTSEN 60
           M Q  P+    +  LH+IDLRGKHDQDW +IH E+I  W+ R +F V+   T+EPT S++
Sbjct: 347 MHQPLPSFCNTNPALHRIDLRGKHDQDWCKIHVEYITKWHSRNEFCVKGVATNEPTVSDD 406

Query: 61  YFVWYKSITRCFIT 75
           YF WY SITR FIT
Sbjct: 407 YFSWYSSITRRFIT 420

The following BLAST results are available for this feature:
BLAST of MELO3C034284.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903693.14.4e-3189.19PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis mel... [more]
XP_008441625.11.3e-1963.51PREDICTED: probable metal-nicotianamine transporter YSL7 [Cucumis melo][more]
ADN34080.11.3e-1488.37hypothetical protein [Cucumis melo subsp. melo][more]
XP_008459571.14.9e-1454.05PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [... [more]
XP_016902435.14.9e-1454.05PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [... [more]
BLAST of MELO3C034284.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034284.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034284.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E636|A0A1S4E636_CUCME2.9e-3189.19serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656... [more]
tr|A0A1S3B4L0|A0A1S3B4L0_CUCME8.7e-2063.51probable metal-nicotianamine transporter YSL7 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|E5GC81|E5GC81_CUCME8.5e-1588.37Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4E383|A0A1S4E383_CUCME3.2e-1454.05serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis m... [more]
tr|A0A1S3CBQ7|A0A1S3CBQ7_CUCME3.2e-1454.05serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis m... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006470 protein dephosphorylation
cellular_component GO:0005634 nucleus
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034284.2.1MELO3C034284.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034284.2Bottle gourd (USVL1VR-Ls)lsimedB087
MELO3C034284.2Wax gourdmedwgoB088