MELO3C030142.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030142.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionLOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like
Locationchr03 : 12096682 .. 12102510 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAATTTTATGGGCTTTGTTACACGGGCCGTAAATAGTTTGGTGTATCATGGAGAGTCATTAAACTCTAGAGGTACAGAAAAATTTGAGGAAGGAACTAGTAGTAATTCTTTTGATGAAAGAATTAGTAGTAGGCAATTTAATGAAGAAGGTGATATCTTTGGTATGCTAAATGATTTACAAGTCCCTATTGAACATGAAGAGGAAATAGAGGGGTTTTGTTTGGAAGATGAAATGTTGATGAATGTTGGGGGTAGATATAGATGAAGATTGAACAAATAATATATTTCAAGACTTATTGAATCAAGTACGTAATGAGTTGTACCCTGGTTGTTCTGAATTCTCGTTGTTGAATTTTTTGGTTAAGTTGATGCATGTGAAAGTTCTAAATGGTTGGAGTAACAAGTCGTTCGACATGTTGTTAGAACTCTTAAGAGCAGCGTTTCCAATGTGTTGTACTATTCCTAGTTCATTTTATGAAGCAAAACGAAAACTTCGTGACTTGGGCTTGGGATACGAGACTATTCACGCGTGCAAGTATGACTGTGTATTGTATTGGAAAGAGTTTGCTGATTTGCAACATTGTCCTACATGTGGCAAGGCTAGGTACAAGGTTAATCATAATAGAGGAAAAAAATTATGCATAAGGTATTGCACCACTTTCCTTTGGTACCTAGATTACAGCGCTTGTTTGTATCGCAAGAAGGGTCTGCTGACATGAGATGGAATAGAGATAAACGTGTTGAAACAGATGATGTCTTGAGACATCCAGCTGATGCAGAGGGGTGGAAGCACTTTGATTTTGAATTTCCTGATTTTGCTTCTTATCCACGGAAGGTGCGTTTGGGCTTGGCTTGAGATGGGTTTAACCCATTTGGTCAAAGGAGTACCTTGTACAGTATGTGGCCTGTTGTATTACTTCCTTACAATTTGCCACCATGGAAATACATGAAAGAGACAAATTTCTTTATGTCACTGCTCATACCCGGTCCTAAATCTCCTAGTAGGGAAATTGATGTGTATCTCCAACCATTGATTAAGGAATTGAAAGAGTTATGGACTTTGGGGGTGCGTACGTATGACTTTCTTACAGGTCAGTTTTTTTAGTTATACGCAGCCTTGTTGTGGACGATTAATGACTTTCCGGCATATGGTGACCTATCAGGGTGGAGTACGAAGGGGTATCAGGCATGTCGTATATGCATGGGTGATAGATCGTCTTTCGGGATACGAGGTAGAATATCTTTCATGGGACATAGACGCTATCTTCCACAGAATCACGTGTGGTGTAGAAGTAGGCTACATGATGGAAAGTTAGAGCGTAAGGCTCCTCCAGTGGTGATGAATGGGCATGAAATATTAGAACAACTAGATCAGTTGGAGTTTCTAATTATGAGTAAACATCCTTCAATACAGGATAAGAAAAGAAAGAGAGCTCTTGATTGGATGAAGAAAAATACTTTTTTCGATCTTTCTTACTGGTCGAGACTACTGTTACGTCACAAACTTGATGTAATGCACATTGAGAAGAATGTTTGTGACAATTTGGTTGGTACGTTATTGAACATCAAAAGGAAAACGAAGGATACCACGAATGCTCGGTTGGACCTATAAGATCTGAAGATAAGAAAGGATTTACATCTTGTAGAAGTGGGTAACCGATTGGTAAAGCCACATGCGAGCTACACGTTGACTAGCTGTGAACGAGTAGAGTTTTGCAAGTTTATGAAATCAGTTAAGTTTTCCGATGGATTTGTTTCCAATATATCGAGATGTGTGCATGAAAGAGAGGGAAAAATATCAGGACTAAAAACGCATGATTGTCATGTTTTATTGCATCGACTGCTACCAATTGGTATTCGATCATTCTTATCAAAGAATGTATACACTGCTATAACTGAATTATGTAATTTTTTTGTGACTTGTACGCCAGAACGATAAGAGTAAGTGATCTAGACAGATTGCAAGCAGATATCATAATCATACTTTGTAAGTTGGAAAGAATATTTCCACCTACCTTCTTTAGCGTTATGGTACACCTTGTCGTTCACTTACCATATGAAACAAAGATTACTGGTCTAGTTTCTTACAGTTAGATGTATCCGATTGAAAGAAGTCTACGCACGTTAAAGCAATATGTTAGAAACAAAGCACGTCCTGAGGGGTCAATTGCAGAAGCCTATGTCATGAATGAATCAAGCACCTTTTGTTCAGGTTACCTACGTGGTATAGAGACTCGATTCACAAGAGATGAGCGAAATGATGATACCATTGTAGAGGACGAGGTAATTGGTGACTTTGAAATTATCAAGCAGAAAGTACAACCCTTATGTGCATCAAGTGTTCGTGCTATATCACAGGAAGATAAACGACTCTTCCATTGGTACGTAGTGAACAATGCTGACGAAATATCGGAGTATCGCAAGTAAGCATATTCCTCATCTTCGTAATTTTTAAATATTTATTATATATTGTTCTTACAGAAATTAAACTCATCCCTATTAGGAAACATTTGAGGCTCCAACGTCGACATGCTCAAAATTCTATGGACTTGTATAAAATACATGAACGGACATTCCCTGAATGGTTTCAAGCACATGTATATAACAAATTTAAGTGTGACATGTAAGAACTAACGTATTTAAGCACGTGAGAAGTCTATAATGATTCTCATATTCATTTCAGGCGTTAGAACTGCGTGAGTCTGCAAACCTATCTGATGATTTCTTCTCTTTAGTGATGGGACCATCCTTTAACGTTCGTTGTTACAATGGATGCATCGTAGGTGGTGTAAGATTTCACACTATTGAACTTGATTCCCGACGTACTACTCAAAACAGTGGAATAATGGTCATTGGTGAAAGCGATGCAAGTGAAACTAGCGAAAATAATTTCTACGGTGTTCTGGATGAAGTGTTGCATGTACAATATCCATCAGGAAGAAATGTATGGCTATTTAAGTGTCGGTGGTATGACACCGACATAAACAAAAGTCAAAGAACACACGTTGAAGTAGGGTACAAATCTCTCAACAAAAGGCAATATCCATTTTTGGTACACGGAGGAAACTGTAATTCTTGCAACTCAAGCACATCTAGTTTTTTACGTAGATGATCCAAAAAATGGTAGCAATTGGAAAGTTGTGCAAGTCATCCAAAATAAGTGTATATGGGACGTGCCAGAAGTGGAGGATGTTCAGAATGACCATATTAATATACTAGAAGTTGTTGTAAGCCATCAAGTGGATGACCACATCGAGGATGAAACTCTATGCGGAAATGACGTTGATCCCACAATCGTTGAAAGACCGGTTATGCATCATGTCACTGACGACTTCATCACGATGTGGATGAATACTTGTCACATGCAAGCGATGATGAATTATAGTGACAACCCACGTACTCACATATTTATCTAGTTTATATATTTTGATTCAAGCTATATGTTCGTATTTTCTTATTGAATGTTCGTTTTCTATGTCCACAACCATTATTTCATATCGACGTAATAATTTTATAGAGACGGACGATATGTTCATCGAGTTTGAGGACGATTTAGATAACATCGCAGGAGGGTCATCATTTGTGGGTGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAATTATTTCATGTTCTTTTTTCTAACTTTATATGTTATTATCGATTTATTGAGCAGGGTCTTCTTCTCAACAACATGCGACTACGAATCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGTCATGTTGCAATAAATGGGCGCATTCCAATGACGATTGCCCCTCGAGCGGAGAAGCCTATTTCCCTACACGCCGTTCACTTCAGCCAGGCGATAGGCGTGTGCGTGCAAAAGATATTTCCCGTCCGCTATTTTAAGTGGGCAGACTTTGGGAGAGAATACATTGAGGTCGTCAAGGGTGACCTCCAGGTAATTAAGTGCACTACACATTTATATATGATTTCATTTGAAACATATCTAACTTTAACCAATCTAATGTGTTATGTTTGTAATGTGTAGCGATTGTTTGTGCTTGATTTCAATGATCAGGCAATGAACAGGTTTGTTGAGCATCAGATGCTCATGACCTTTAAAGAGTTCCGGACCGACTGTCACAGACATTTCAAAAAGTATAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCACTGGTTGGACATGATGAGGATTGACACTTCCTTTGCAACCACAATATCAACCGTGCATTCCAGGTATTTTTCATGATTAATTATGATAACAAGTTTTAATATGTATAAGAAATAAACAATATAATTGTTTTAATGCAGGAGCAATCACGGACGAACAAGGCTGCTAGATAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGATAGTACGAGCTCGCTGAGAGAAAAGGGGAGTCGGTCGATCGTGTGGAGTTGTTCTGGGAAACACACGTTCGAGCTAGGACGTTTGTGTTGCAGGCCACTGAGGATGCACATGTAAGTTATGCCCTTATTAATTATCCACTTTCATTATATATTTTTGCGCATTACCTAACATAGTTTTTAAATTTGTTACAGAATCAAATGTTAGAACTCCAATCTCAGCCTACCTTAGAGAGTAGTCAGCCACTTTTTGAGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCTAAGCTGAAGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTAGAGAGTAGTCAGCCACTTTTTGAGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCTAAGCTGAAGGCCCACAAAATGGCGAGTGCAATCAGTTCGTCCACATCTTGTTCGCAGTCCACAAAAAAAGAGATTGAATTACAAGCTAAACTTCATGAAGCTTTGGAACGGGTTGAAGTACAAGATAGAAATCACCAAGCGTTAGCTTCACAGGTGGAAAGCATGAAAAAGATGATAGAAGAATTAACTCGTGCACAATAGGGACCACCACATGATCCCTAGCTCTGCGGTACGTAAATATGTCTCTATTATTCTTAAGTTTTTGCAATATATGATTATGTACTAAACTTAGTTACTTTTATATCACTTTTAGGACCGAAGGTGTAGAATGACGCATACGCACCTCATTGGGAGACTTTTTGTTATGTTTGTGTTTTCTTGTATTACGAGAACTATATTTTTTGTAGTGAACTTATTCGTATTATTAATTTTAATTCTTTTTTTTAATTTGTGTTTGTATATTTCTTAATTTATTTTAATTTATATTCAAATTATTTTAATTTAATCCAAAACGTCGAGAAAAATATTTTAGCAATCCGAACATCGTTGTGAATATTTGAGCAAAATATTTTAAGGAAAAAAATAGAAATGAAATATTAAAAAAATATATAAAAAGGAATTCCCGACG

mRNA sequence

ATGGCTAATTTTATGGGCTTTGTTACACGGGCCGTAAATAGTTTGGTGTATCATGGAGAGTCATTAAACTCTAGAGAGACGGACGATATGTTCATCGAGTTTGAGGACGATTTAGATAACATCGCAGGAGGGTCATCATTTGTGGGTGACAATACGGGGTCTTCTTCTCAACAACATGCGACTACGAATCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGTCATGTTGCAATAAATGGGCGCATTCCAATGACGATTGCCCCTCGAGCGGAGAAGCCTATTTCCCTACACGCCGTTCACTTCAGCCAGGCGATAGGCGTGTGCGTGCAAAAGATATTTCCCGTCCGCTATTTTAAGTGGGCAGACTTTGGGAGAGAATACATTGAGGTCGTCAAGGGTGACCTCCAGCGATTGTTTGTGCTTGATTTCAATGATCAGGCAATGAACAGGTTTGTTGAGCATCAGATGCTCATGACCTTTAAAGAGTTCCGGACCGACTGTCACAGACATTTCAAAAAGTATAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCACTGGAGCAATCACGGACGAACAAGGCTGCTAGATAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGATAGTACGAGCTCGCTGAGAGAAAAGGGGAGTCGGTCGATCGTGTGGAGTTGTTCTGGGAAACACACGTTCGAGCTAGGACGTTTGTGTTGCAGGCCACTGAGGATGCACATAATCAAATGTTAGAACTCCAATCTCAGCCTACCTTAGAGAGTAGTCAGCCACTTTTTGAGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCTAAGCTGAAGGCCCACAAAATGGCGAGTGCAATCAGTTCGTCCACATCTTGTTCGCAGTCCACAAAAAAAGAGATTGAATTACAAGCTAAACTTCATGAAGCTTTGGAACGGGTTGAAGTACAAGATAGAAATCACCAAGCGTTAGCTTCACAGGTGGAAAGCATGAAAAAGATGATAGAAGAATTAACTCGTGCACAATAGGGACCACCACATGATCCCTAGCTCTGCGGACCGAAGGTGTAGAATGACGCATACGCACCTCATTGGGAGACTTTTTGTTATGTTTGTGTTTTCTTGTATTACGAGAACTATATTTTTTGTAGTGAACTTATTCGTATTATTAATTTTAATTCTTTTTTTTAATTTGTGTTTGTATATTTCTTAATTTAATCCAAAACGTCGAGAAAAATATTTTAGCAATCCGAACATCGTTGTGAATATTTGAGCAAAATATTTTAAGGAAAAAAATAGAAATGAAATATTAAAAAAATATATAAAAAGGAATTCCCGACG

Coding sequence (CDS)

ATGGCTAATTTTATGGGCTTTGTTACACGGGCCGTAAATAGTTTGGTGTATCATGGAGAGTCATTAAACTCTAGAGAGACGGACGATATGTTCATCGAGTTTGAGGACGATTTAGATAACATCGCAGGAGGGTCATCATTTGTGGGTGACAATACGGGGTCTTCTTCTCAACAACATGCGACTACGAATCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGTCATGTTGCAATAAATGGGCGCATTCCAATGACGATTGCCCCTCGAGCGGAGAAGCCTATTTCCCTACACGCCGTTCACTTCAGCCAGGCGATAGGCGTGTGCGTGCAAAAGATATTTCCCGTCCGCTATTTTAAGTGGGCAGACTTTGGGAGAGAATACATTGAGGTCGTCAAGGGTGACCTCCAGCGATTGTTTGTGCTTGATTTCAATGATCAGGCAATGAACAGGTTTGTTGAGCATCAGATGCTCATGACCTTTAAAGAGTTCCGGACCGACTGTCACAGACATTTCAAAAAGTATAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCACTGGAGCAATCACGGACGAACAAGGCTGCTAGATAG

Protein sequence

MANFMGFVTRAVNSLVYHGESLNSRETDDMFIEFEDDLDNIAGGSSFVGDNTGSSSQQHATTNPRRRAQSRLLELERHVAINGRIPMTIAPRAEKPISLHAVHFSQAIGVCVQKIFPVRYFKWADFGREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLMTFKEFRTDCHRHFKKYSDPEEARANPPNALEQSRTNKAAR
Homology
[Close]
BLAST of MELO3C030142.2 vs. NCBI nr
Match: ADN34071.1 (CACTA en-spm transposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 285.0 bits (728), Expect = 1.9e-73
Identity = 153/196 (78.06%), Postives = 159/196 (81.12%), Query Frame = 0 

Query: 26  ETDDMFIEFEDDLDNIAGGSSFVGDNTGSSSQQHATTNPRRRAQSRLLELERHVAINGRI 85
           ETDDMF++FEDDLDNIAGGSS VGDNT SSSQQ AT  PRRRAQSRLLELERHVAING I
Sbjct: 2   ETDDMFLQFEDDLDNIAGGSSSVGDNTESSSQQ-ATPTPRRRAQSRLLELERHVAINGCI 61

Query: 86  PMTIAPRAEKPISLHAVHFSQAIGVCVQKIFPVRYFKWADFGREYIEVVKGDLQRLFVLD 145
           PMTIAP AEKPIS +AVHFSQAIGVCV+K FPVR  KW D GREYIEVVKGDLQR FVLD
Sbjct: 62  PMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVLD 121

Query: 146 FNDQAMNRFVEHQMLMTFKEFRTDCHRHFKKYSDPEEARANPPNAL-------------- 202
           FNDQAMNRFVEHQM+ TFKEF+ DCHRHFKKYSDPEEARANPPNAL              
Sbjct: 122 FNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRDEDWHFLYDHY 181

[Close]
BLAST of MELO3C030142.2 vs. NCBI nr
Match: XP_016901035.1 (PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 125/169 (73.96%), Postives = 132/169 (78.11%), Query Frame = 0 

Query: 23  NSRETDDMFIEFEDDLDNIAGGSSFVGDNTGSSSQQHATTNPRRRAQSRLLELERHVAIN 82
           N  ETD MF+EFEDDLDN+AGGSS VGDN GSSSQ  AT  PRRR QSRLLELE HV + 
Sbjct: 7   NFLETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELECHVVVY 66

Query: 83  GRIPMTIAPRAEKPISLHAVHFSQAIGVCVQKIFPVRYFKWADFGREYIEVVKGDLQRLF 142
           G IPM IAP AE PI  +A+ FSQAIGVCVQK F V Y KWAD  REYIEVVKG+LQR F
Sbjct: 67  GCIPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKGNLQRFF 126

Query: 143 VLDFNDQAMNRFVEHQMLMTFKEFRTDCHRHFKKYSDPEEARANPPNAL 192
           VLDFNDQA+NRFVEHQML TFKEF  DCHRHFK      EARANPPN L
Sbjct: 127 VLDFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPNVL 169

[Close]
BLAST of MELO3C030142.2 vs. NCBI nr
Match: XP_016901155.1 (PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28
Identity = 85/169 (50.30%), Postives = 96/169 (56.80%), Query Frame = 0 

Query: 23  NSRETDDMFIEFEDDLDNIAGGSSFVGDNTGSSSQQHATTNPRRRAQSRLLELERHVAIN 82
           N  ETD MF++F  DLDN+AGGSS + +N+ SSSQ  AT  P+R  QSRLLELE +V   
Sbjct: 58  NFLETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQSRLLELECYVT-- 117

Query: 83  GRIPMTIAPRAEKPISLHAVHFSQAIGVCVQKIFPVRYFKWADFGREYIEVVKGDLQRLF 142
                                                       GREYIEVVK DLQ  F
Sbjct: 118 --------------------------------------------GREYIEVVKADLQ-FF 177

Query: 143 VLDFNDQAMNRFVEHQMLMTFKEFRTDCHRHFKKYSDPEEARANPPNAL 192
           VLDF+DQAMN  VE+QM  TFKEF  DCH+ FKKYSDPEEARANPPN L
Sbjct: 178 VLDFSDQAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANPPNLL 179

[Close]
BLAST of MELO3C030142.2 vs. NCBI nr
Match: XP_011648549.1 (PREDICTED: (R)-mandelonitrile lyase 1-like [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 1.2e-17
Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 0 

Query: 36  DDLDNIAGGSSFVGDNTGSSSQQHATTNPRRRAQSRLLELERHVAINGRIPMTIAPRAEK 95
           D LDN A G S VG+ T  +SQ   T   RRR  SR LELER++  NG+I ++I    +K
Sbjct: 702 DTLDN-AEGLSLVGE-TSDASQFTLTATLRRRQHSRNLELERYILQNGKILISIPLEGDK 761

Query: 96  PISLHAVHFSQAIGVCVQKIFPVRYFKWADFGREYIEVVKGDLQRLFVLDFNDQAMNRFV 155
           PIS H + FS  I V  +  FP++  KW D  +EYIEVVK    + FVLDF D  + RFV
Sbjct: 762 PISPHPIRFSCTIDVLTRDTFPIQILKWVDVPQEYIEVVK----QWFVLDFKDLTLTRFV 819

Query: 156 EHQM 160
           EHQM
Sbjct: 822 EHQM 819

[Close]
BLAST of MELO3C030142.2 vs. NCBI nr
Match: XP_016903164.1 (PREDICTED: uncharacterized protein LOC107992057 [Cucumis melo])

HSP 1 Score: 78.2 bits (191), Expect = 3.6e-11
Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 0 

Query: 54  SSSQQHATTNPRRRAQSRLLELERHVAINGRIPMTIAPRAEKPISLHAVHFSQAIGVCVQ 113
           +++ Q     PRR   SR LEL+R+VA NG+I + I P  +K IS + VHFS  IGV   
Sbjct: 288 TNASQPVARTPRRCEHSRNLELDRYVAQNGKILIFIVPGQDKRISPYVVHFSNTIGVLTG 347

Query: 114 KIFPVRYFKWADFGREYIEVVKGDLQRLF 143
             F VR+ KWAD   EYIE++K  LQ  F
Sbjct: 348 DTFLVRFLKWADMITEYIELIKSSLQISF 376

[Close]
BLAST of MELO3C030142.2 vs. TrEMBL
Match: tr|E5GC72|E5GC72_CUCME (CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.3e-73
Identity = 153/196 (78.06%), Postives = 159/196 (81.12%), Query Frame = 0 

Query: 26  ETDDMFIEFEDDLDNIAGGSSFVGDNTGSSSQQHATTNPRRRAQSRLLELERHVAINGRI 85
           ETDDMF++FEDDLDNIAGGSS VGDNT SSSQQ AT  PRRRAQSRLLELERHVAING I
Sbjct: 2   ETDDMFLQFEDDLDNIAGGSSSVGDNTESSSQQ-ATPTPRRRAQSRLLELERHVAINGCI 61

Query: 86  PMTIAPRAEKPISLHAVHFSQAIGVCVQKIFPVRYFKWADFGREYIEVVKGDLQRLFVLD 145
           PMTIAP AEKPIS +AVHFSQAIGVCV+K FPVR  KW D GREYIEVVKGDLQR FVLD
Sbjct: 62  PMTIAPGAEKPISPYAVHFSQAIGVCVRKTFPVRCLKWVDVGREYIEVVKGDLQRFFVLD 121

Query: 146 FNDQAMNRFVEHQMLMTFKEFRTDCHRHFKKYSDPEEARANPPNAL-------------- 202
           FNDQAMNRFVEHQM+ TFKEF+ DCHRHFKKYSDPEEARANPPNAL              
Sbjct: 122 FNDQAMNRFVEHQMVTTFKEFQVDCHRHFKKYSDPEEARANPPNALVGRDEDWHFLYDHY 181

[Close]
BLAST of MELO3C030142.2 vs. TrEMBL
Match: tr|A0A1S4DZ93|A0A1S4DZ93_CUCME (uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 8.9e-59
Identity = 125/169 (73.96%), Postives = 132/169 (78.11%), Query Frame = 0 

Query: 23  NSRETDDMFIEFEDDLDNIAGGSSFVGDNTGSSSQQHATTNPRRRAQSRLLELERHVAIN 82
           N  ETD MF+EFEDDLDN+AGGSS VGDN GSSSQ  AT  PRRR QSRLLELE HV + 
Sbjct: 7   NFLETDVMFLEFEDDLDNLAGGSSSVGDNAGSSSQPPATQTPRRRVQSRLLELECHVVVY 66

Query: 83  GRIPMTIAPRAEKPISLHAVHFSQAIGVCVQKIFPVRYFKWADFGREYIEVVKGDLQRLF 142
           G IPM IAP AE PI  +A+ FSQAIGVCVQK F V Y KWAD  REYIEVVKG+LQR F
Sbjct: 67  GCIPMMIAPGAEMPIFPYAIRFSQAIGVCVQKTFFVCYLKWADIDREYIEVVKGNLQRFF 126

Query: 143 VLDFNDQAMNRFVEHQMLMTFKEFRTDCHRHFKKYSDPEEARANPPNAL 192
           VLDFNDQA+NRFVEHQML TFKEF  DCHRHFK      EARANPPN L
Sbjct: 127 VLDFNDQAINRFVEHQMLTTFKEFWGDCHRHFK------EARANPPNVL 169

[Close]
BLAST of MELO3C030142.2 vs. TrEMBL
Match: tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME (LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103493054 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 7.4e-29
Identity = 85/169 (50.30%), Postives = 96/169 (56.80%), Query Frame = 0 

Query: 23  NSRETDDMFIEFEDDLDNIAGGSSFVGDNTGSSSQQHATTNPRRRAQSRLLELERHVAIN 82
           N  ETD MF++F  DLDN+AGGSS + +N+ SSSQ  AT  P+R  QSRLLELE +V   
Sbjct: 58  NFLETDVMFLKFAGDLDNLAGGSSSMDENSESSSQPSATLTPKRHTQSRLLELECYVT-- 117

Query: 83  GRIPMTIAPRAEKPISLHAVHFSQAIGVCVQKIFPVRYFKWADFGREYIEVVKGDLQRLF 142
                                                       GREYIEVVK DLQ  F
Sbjct: 118 --------------------------------------------GREYIEVVKADLQ-FF 177

Query: 143 VLDFNDQAMNRFVEHQMLMTFKEFRTDCHRHFKKYSDPEEARANPPNAL 192
           VLDF+DQAMN  VE+QM  TFKEF  DCH+ FKKYSDPEEARANPPN L
Sbjct: 178 VLDFSDQAMNTSVEYQMSNTFKEFWGDCHKQFKKYSDPEEARANPPNLL 179

[Close]
BLAST of MELO3C030142.2 vs. TrEMBL
Match: tr|A0A1S4E4L2|A0A1S4E4L2_CUCME (uncharacterized protein LOC107992057 OS=Cucumis melo OX=3656 GN=LOC107992057 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.4e-11
Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 0 

Query: 54  SSSQQHATTNPRRRAQSRLLELERHVAINGRIPMTIAPRAEKPISLHAVHFSQAIGVCVQ 113
           +++ Q     PRR   SR LEL+R+VA NG+I + I P  +K IS + VHFS  IGV   
Sbjct: 288 TNASQPVARTPRRCEHSRNLELDRYVAQNGKILIFIVPGQDKRISPYVVHFSNTIGVLTG 347

Query: 114 KIFPVRYFKWADFGREYIEVVKGDLQRLF 143
             F VR+ KWAD   EYIE++K  LQ  F
Sbjct: 348 DTFLVRFLKWADMITEYIELIKSSLQISF 376

[Close]
BLAST of MELO3C030142.2 vs. TrEMBL
Match: tr|A0A1S4E4T7|A0A1S4E4T7_CUCME (uncharacterized protein LOC107991989 OS=Cucumis melo OX=3656 GN=LOC107991989 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.4e-09
Identity = 38/55 (69.09%), Postives = 39/55 (70.91%), Query Frame = 0 

Query: 23 NSRETDDMFIEFEDDLDNIAGGSSFVGDNTGSSSQQHATTNPRRRAQSRLLELER 78
          N  ETD MF+EFED LDN  GGSS VGDN GSSSQQ  T  PRR  QSRLL L R
Sbjct: 9  NFLETDTMFLEFEDQLDNFTGGSSSVGDNVGSSSQQPGTLTPRRHVQSRLLGLLR 63

The following BLAST results are available for this feature:
BLAST of MELO3C030142.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34071.11.9e-7378.06CACTA en-spm transposon protein [Cucumis melo subsp. melo][more]
XP_016901035.11.3e-5873.96PREDICTED: uncharacterized protein LOC107991153 [Cucumis melo] >XP_016901036.1 P... [more]
XP_016901155.11.1e-2850.30PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochond... [more]
XP_011648549.11.2e-1749.19PREDICTED: (R)-mandelonitrile lyase 1-like [Cucumis sativus][more]
XP_016903164.13.6e-1147.19PREDICTED: uncharacterized protein LOC107992057 [Cucumis melo][more]
BLAST of MELO3C030142.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030142.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030142.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GC72|E5GC72_CUCME1.3e-7378.06CACTA en-spm transposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4DZ93|A0A1S4DZ93_CUCME8.9e-5973.96uncharacterized protein LOC107991153 OS=Cucumis melo OX=3656 GN=LOC107991153 PE=... [more]
tr|A0A1S4DZJ7|A0A1S4DZJ7_CUCME7.4e-2950.30LOW QUALITY PROTEIN: gamma-aminobutyrate transaminase POP2, mitochondrial-like O... [more]
tr|A0A1S4E4L2|A0A1S4E4L2_CUCME2.4e-1147.19uncharacterized protein LOC107992057 OS=Cucumis melo OX=3656 GN=LOC107992057 PE=... [more]
tr|A0A1S4E4T7|A0A1S4E4T7_CUCME8.4e-0969.09uncharacterized protein LOC107991989 OS=Cucumis melo OX=3656 GN=LOC107991989 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0008483 transaminase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030142.2.1MELO3C030142.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..201

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030142.2Cucumber (Chinese Long) v3cucmedB473
MELO3C030142.2Watermelon (97103) v2medwmbB300
MELO3C030142.2Wax gourdmedwgoB329
MELO3C030142.2Cucumber (Gy14) v2cgybmedB413
MELO3C030142.2Cucumber (Gy14) v1cgymedB588
MELO3C030142.2Wild cucumber (PI 183967)cpimedB464
MELO3C030142.2Cucumber (Chinese Long) v2cumedB455
MELO3C030142.2Bottle gourd (USVL1VR-Ls)lsimedB497
MELO3C030142.2Watermelon (Charleston Gray)medwcgB299