MELO3C018929 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018929
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTransposable element protein, putative
Locationchr7 : 13457090 .. 13457509 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCCTACATCAAGTTCCTGAAAGGCATCTTGGCGAAGAAAAGGAAGATTAATGATTTTGAGACTGTAGCTCTAACGCAAACAACAAGTGACGTCTTCAAGAATGGGGTACCAAAGAAGATGACAGATCTTGGAAGCTTTATAGTTTCCTGCTCAATAGGCGGAATGGATTTGGGTCGTGCTTTATACAAGCTAGGGGCGAGCATCAATTTGATGTATCTTTTTATCTTCAAGAAATTACGGATAGAGGAGGTACAATCATCTCATATGAGGCTCTCATTCGCTGACAGGTCCTTTGCCAAGTTAGAAGAAAAGATTGAAGATGTTTTGGTGAAGGTGGACAAGTTTTTGTTTTCCGCAGACTTCGTTATTCTGGATTACGAAGCTGATCGGAAGGTTCCTATCATTTTAGGGTAG

mRNA sequence

ATGCCTTCCTACATCAAGTTCCTGAAAGGCATCTTGGCGAAGAAAAGGAAGATTAATGATTTTGAGACTGTAGCTCTAACGCAAACAACAAGTGACGTCTTCAAGAATGGGGTACCAAAGAAGATGACAGATCTTGGAAGCTTTATAGTTTCCTGCTCAATAGGCGGAATGGATTTGGGTCGTGCTTTATACAAGCTAGGGGCGAGCATCAATTTGATGTATCTTTTTATCTTCAAGAAATTACGGATAGAGGAGGTACAATCATCTCATATGAGGCTCTCATTCGCTGACAGGTCCTTTGCCAAGTTAGAAGAAAAGATTGAAGATGTTTTGGTGAAGGTGGACAAGTTTTTGTTTTCCGCAGACTTCGTTATTCTGGATTACGAAGCTGATCGGAAGGTTCCTATCATTTTAGGGTAG

Coding sequence (CDS)

ATGCCTTCCTACATCAAGTTCCTGAAAGGCATCTTGGCGAAGAAAAGGAAGATTAATGATTTTGAGACTGTAGCTCTAACGCAAACAACAAGTGACGTCTTCAAGAATGGGGTACCAAAGAAGATGACAGATCTTGGAAGCTTTATAGTTTCCTGCTCAATAGGCGGAATGGATTTGGGTCGTGCTTTATACAAGCTAGGGGCGAGCATCAATTTGATGTATCTTTTTATCTTCAAGAAATTACGGATAGAGGAGGTACAATCATCTCATATGAGGCTCTCATTCGCTGACAGGTCCTTTGCCAAGTTAGAAGAAAAGATTGAAGATGTTTTGGTGAAGGTGGACAAGTTTTTGTTTTCCGCAGACTTCGTTATTCTGGATTACGAAGCTGATCGGAAGGTTCCTATCATTTTAGGGTAG

Protein sequence

MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLGRALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFSADFVILDYEADRKVPIILG*
Homology
[Close]
BLAST of MELO3C018929 vs. TrEMBL
Match: A0A0S3QWS7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G023800 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 9.2e-33
Identity = 76/139 (54.68%), Postives = 98/139 (70.50%), Query Frame = 1 

Query: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60
           MPSY KF+K +L+KKRK+ D ET+ LT+  S + +  +P K+ D GSF++ C IG + +G
Sbjct: 86  MPSYAKFMKDLLSKKRKLQDDETIMLTEECSAIIQQKLPPKLKDPGSFVIPCEIGNITVG 145

Query: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120
           +AL  LGASINLM L IFK+L I EV+ + + L  ADRS       +EDVLVKVDKF+F 
Sbjct: 146 KALCDLGASINLMPLSIFKRLGIGEVKPTMITLQLADRSMTYPYGIVEDVLVKVDKFIFP 205

Query: 121 ADFVILDYEADRKVPIILG 140
            DFV+LD E D KVPIILG
Sbjct: 206 TDFVVLDMEEDAKVPIILG 224

[Close]
BLAST of MELO3C018929 vs. TrEMBL
Match: A0A151SBH9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025909 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.4e-27
Identity = 67/139 (48.20%), Postives = 93/139 (66.91%), Query Frame = 1 

Query: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60
           MP+Y++F+K +L KKR+I + ETV L    S + +  +P+K  D GSF +  SIG + +G
Sbjct: 143 MPTYVRFMKDLLTKKRRILEEETVELEAGCSAIIQKSLPQKSRDPGSFTLPVSIGNLSVG 202

Query: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120
           +AL  LGASINLM L + KK+   EV+ + M L  ADRS       +ED++VKVDKF+F 
Sbjct: 203 KALLDLGASINLMPLSMLKKIGDVEVRPTRMTLQLADRSVKFPHGIVEDMIVKVDKFMFP 262

Query: 121 ADFVILDYEADRKVPIILG 140
            DFV++D E D KVP+ILG
Sbjct: 263 VDFVVMDMEEDVKVPLILG 281

[Close]
BLAST of MELO3C018929 vs. TrEMBL
Match: U5CWW5_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s03373p00000010 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.8e-27
Identity = 71/139 (51.08%), Postives = 89/139 (64.03%), Query Frame = 1 

Query: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60
           MP+Y+KFLK IL KKR++ +FETVALT+  S + K+ +P K+ D GSF +  SIGG D  
Sbjct: 72  MPTYVKFLKDILTKKRRLGEFETVALTEGCSAMLKSKIPPKLKDPGSFTIPISIGGRD-- 131

Query: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120
                              KL I E + + + L  ADRS A  E KIEDVLV+VDKF+F 
Sbjct: 132 -------------------KLGIGEARPTTVTLQLADRSMAHPEGKIEDVLVQVDKFIFP 189

Query: 121 ADFVILDYEADRKVPIILG 140
           ADF+ILDYE DR+VPIILG
Sbjct: 192 ADFIILDYEEDREVPIILG 189

[Close]
BLAST of MELO3C018929 vs. TrEMBL
Match: A0A151RJ56_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_036030 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.6e-27
Identity = 66/139 (47.48%), Postives = 92/139 (66.19%), Query Frame = 1 

Query: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60
           MP+Y +F+K +L KKR++ + ETV L    S + +  +P+K  D G F +  SIG + +G
Sbjct: 172 MPTYARFMKELLTKKRRVLEEETVELEAGCSAIIQKSLPQKSRDPGIFTLPVSIGNLSVG 231

Query: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120
           +AL  LGASINLM L + KK+R  EV+ + M L  ADRS       +ED++VKVDKF+F 
Sbjct: 232 KALLDLGASINLMPLSMLKKIREVEVRPTRMTLQLADRSIKLPHGIVEDMIVKVDKFMFP 291

Query: 121 ADFVILDYEADRKVPIILG 140
            DFV++D E D KVP+ILG
Sbjct: 292 VDFVVMDMEEDLKVPLILG 310

[Close]
BLAST of MELO3C018929 vs. TrEMBL
Match: A0A151R586_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_041119 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-26
Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 1 

Query: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60
           MP+Y +F+K +L KKRK+ + ET+ L    S + +  +P+K  D GSF +  SIG + +G
Sbjct: 21  MPTYARFMKELLTKKRKVLEEETMELEAGCSAIIQKSLPQKSRDPGSFTLPVSIGNLSVG 80

Query: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120
           +AL  LGASINLM L + KK+   EV+ + M L  ADRS     + +ED++VKVDKF+F 
Sbjct: 81  KALLDLGASINLMSLSMLKKIGEVEVRPTRMTLQLADRSIKLPHDIVEDMIVKVDKFMFL 140

Query: 121 ADFVILDYEADRKVPIILG 140
            DFV++D E D +VP+ILG
Sbjct: 141 VDFVVMDMEEDVEVPLILG 159

[Close]
BLAST of MELO3C018929 vs. NCBI nr
Match: gi|659111282|ref|XP_008455671.1| (PREDICTED: uncharacterized protein LOC103495785 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-69
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1 

Query: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60
           MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG
Sbjct: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60

Query: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120
           RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS
Sbjct: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120

Query: 121 ADFVILDYEADRKVPIILG 140
           ADFVILDYEADRKVPIILG
Sbjct: 121 ADFVILDYEADRKVPIILG 139

[Close]
BLAST of MELO3C018929 vs. NCBI nr
Match: gi|659093662|ref|XP_008447648.1| (PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 2.8e-43
Identity = 97/138 (70.29%), Postives = 109/138 (78.99%), Query Frame = 1 

Query: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60
           MPSY KFL  ILAKKR+INDF+T+AL Q TSD++KNGV +KMT  GSF V CSI GMDLG
Sbjct: 1   MPSYAKFLTDILAKKRRINDFQTMALRQATSDIYKNGVLEKMTYPGSFKVPCSIDGMDLG 60

Query: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120
             L  LGASINLM L IFKKL+I+EVQ +HMR   ADRS    + KIEDVLVKVDKFLF 
Sbjct: 61  HVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSITNPKGKIEDVLVKVDKFLFF 120

Query: 121 ADFVILDYEADRKVPIIL 139
           ADF+ILDYEAD +V IIL
Sbjct: 121 ADFIILDYEADEEVLIIL 138

[Close]
BLAST of MELO3C018929 vs. NCBI nr
Match: gi|659111569|ref|XP_008455795.1| (PREDICTED: uncharacterized protein LOC103495890 [Cucumis melo])

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-40
Identity = 91/138 (65.94%), Postives = 107/138 (77.54%), Query Frame = 1 

Query: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60
           +PSY+KFLK I  KKR++N++ETV LTQ TS++FKN V KKMT   SF VSCSI  MDLG
Sbjct: 10  IPSYVKFLKYIFTKKRRMNEYETVTLTQATSNIFKNMVQKKMTYPRSFTVSCSIDDMDLG 69

Query: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120
             L  LGASINLM+L IFKKL + E Q + M L F DRS  + E KI+DVL+KVDKFLF 
Sbjct: 70  HTLCNLGASINLMHLSIFKKLGMWEAQPTKMVLQFVDRSITRPEGKIDDVLIKVDKFLFL 129

Query: 121 ADFVILDYEADRKVPIIL 139
           ADF+ILDYEADR+VPIIL
Sbjct: 130 ADFIILDYEADREVPIIL 147

[Close]
BLAST of MELO3C018929 vs. NCBI nr
Match: gi|659130345|ref|XP_008465121.1| (PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo])

HSP 1 Score: 173.7 bits (439), Expect = 2.2e-40
Identity = 91/128 (71.09%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 12  LAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLGRALYKLGASIN 71
           +AKK + ND ETVALT  TSD+ KNG PKKMTD  SF V CSI  MDLG  L  LGASIN
Sbjct: 1   MAKKGRNNDCETVALTLETSDILKNGAPKKMTDCRSFTVPCSINNMDLGHVLCDLGASIN 60

Query: 72  LMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFSADFVILDYEAD 131
           LM L IFKKL IEEVQ  HMRL F DRS AK E KIED+LVKVDKFLF ADF+ILDYEA+
Sbjct: 61  LMPLSIFKKLEIEEVQPMHMRLQFVDRSIAKHEGKIEDILVKVDKFLFHADFIILDYEAN 120

Query: 132 RKVPIILG 140
           ++VPII G
Sbjct: 121 QEVPIIFG 128

[Close]
BLAST of MELO3C018929 vs. NCBI nr
Match: gi|985444913|ref|XP_015384972.1| (PREDICTED: uncharacterized protein LOC107176669 [Citrus sinensis])

HSP 1 Score: 169.1 bits (427), Expect = 5.5e-39
Identity = 85/139 (61.15%), Postives = 109/139 (78.42%), Query Frame = 1 

Query: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60
           MP+Y+KFLK ILA+KR++ +FETVALTQ +S + +N +P K+ DLGSFI+ CSIG    G
Sbjct: 87  MPNYVKFLKDILARKRRLGEFETVALTQESSHMLQNKIPAKVKDLGSFIIPCSIGTRYAG 146

Query: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120
           RAL  LGASINLM L +FK+L +EE + + + L  ADRS A  E KIEDVLVKVDKF+F 
Sbjct: 147 RALCDLGASINLMPLSVFKQLGVEECRPTTVTLQLADRSHAYPEGKIEDVLVKVDKFIFL 206

Query: 121 ADFVILDYEADRKVPIILG 140
            DF++LD+EAD++VPIILG
Sbjct: 207 VDFIVLDFEADKEVPIILG 225

The following BLAST results are available for this feature:
BLAST of MELO3C018929 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S3QWS7_PHAAN9.2e-3354.68Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G023800 PE=... [more]
A0A151SBH9_CAJCA4.4e-2748.20Uncharacterized protein OS=Cajanus cajan GN=KK1_025909 PE=4 SV=1[more]
U5CWW5_AMBTC5.8e-2751.08Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s03373p00000010 PE=4 SV=... [more]
A0A151RJ56_CAJCA7.6e-2747.48Uncharacterized protein OS=Cajanus cajan GN=KK1_036030 PE=4 SV=1[more]
A0A151R586_CAJCA1.3e-2646.76Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_041119 PE=4 SV=1[more]
BLAST of MELO3C018929 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111282|ref|XP_008455671.1|1.4e-69100.00PREDICTED: uncharacterized protein LOC103495785 [Cucumis melo][more]
gi|659093662|ref|XP_008447648.1|2.8e-4370.29PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo][more]
gi|659111569|ref|XP_008455795.1|1.0e-4065.94PREDICTED: uncharacterized protein LOC103495890 [Cucumis melo][more]
gi|659130345|ref|XP_008465121.1|2.2e-4071.09PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo][more]
gi|985444913|ref|XP_015384972.1|5.5e-3961.15PREDICTED: uncharacterized protein LOC107176669 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018929T1MELO3C018929T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33067FAMILY NOT NAMEDcoord: 1..139
score: 1.3
NoneNo IPR availablePANTHERPTHR33067:SF2SUBFAMILY NOT NAMEDcoord: 1..139
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018929Silver-seed gourdcarmeB0699
MELO3C018929Silver-seed gourdcarmeB0814
MELO3C018929Watermelon (97103) v2mewmbB493
MELO3C018929Wax gourdmewgoB581
MELO3C018929Cucurbita maxima (Rimu)cmameB246
MELO3C018929Cucurbita maxima (Rimu)cmameB435
MELO3C018929Cucurbita moschata (Rifu)cmomeB234
MELO3C018929Cucurbita moschata (Rifu)cmomeB426
MELO3C018929Watermelon (Charleston Gray)mewcgB487
MELO3C018929Watermelon (97103) v1mewmB515
MELO3C018929Cucurbita pepo (Zucchini)cpemeB541
MELO3C018929Cucurbita pepo (Zucchini)cpemeB590
MELO3C018929Bottle gourd (USVL1VR-Ls)lsimeB448