MELO3C015203 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015203
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTransmembrane protein, putative
Locationchr2 : 5315281 .. 5315733 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCAGCAATTTGATATTACCTTCAATTCGAGTTTTCTGTGCAGACATTAATGGCAGGATTCAGCATCCACAGGGCGATGTGGCTGTTTGTGGTGACTCTGGTGCTCCTGCTCGCAGTGGCCAGAGCTCAAGACGGTGCAGGACTTGCACCATTACCTGCTATGGATGCTGGGACTGGATTTCAGGTGACATTTTCGAATGGTGGAATTCTCCTATCAATGTTCATCTACCTCGTTGCGCTTCTCTGGCATTAGATACAAGATCTTCCTGCTTTCTCATTGATCAGTATGATTGGTTTTTGATGTTTTGTATGTATGTGTTATTGTCATTGTACTGGCGCTAAATTTTTTTTTGTTTATTTTTGGCCATATATTTGGGGCATTATTCTACATGCTTTTGGTCTGTAACCTCAGGGGTATTATCAATAAAGAATTGTTCTTGACATTGAGTTTCT

mRNA sequence

AGCAGCAATTTGATATTACCTTCAATTCGAGTTTTCTGTGCAGACATTAATGGCAGGATTCAGCATCCACAGGGCGATGTGGCTGTTTGTGGTGACTCTGGTGCTCCTGCTCGCAGTGGCCAGAGCTCAAGACGGTGCAGGACTTGCACCATTACCTGCTATGGATGCTGGGACTGGATTTCAGGTGACATTTTCGAATGGTGGAATTCTCCTATCAATGTTCATCTACCTCGTTGCGCTTCTCTGGCATTAGATACAAGATCTTCCTGCTTTCTCATTGATCAGTATGATTGGTTTTTGATGTTTTGTATGTATGTGTTATTGTCATTGTACTGGCGCTAAATTTTTTTTTGTTTATTTTTGGCCATATATTTGGGGCATTATTCTACATGCTTTTGGTCTGTAACCTCAGGGGTATTATCAATAAAGAATTGTTCTTGACATTGAGTTTCT

Coding sequence (CDS)

ATGGCAGGATTCAGCATCCACAGGGCGATGTGGCTGTTTGTGGTGACTCTGGTGCTCCTGCTCGCAGTGGCCAGAGCTCAAGACGGTGCAGGACTTGCACCATTACCTGCTATGGATGCTGGGACTGGATTTCAGGTGACATTTTCGAATGGTGGAATTCTCCTATCAATGTTCATCTACCTCGTTGCGCTTCTCTGGCATTAG

Protein sequence

MAGFSIHRAMWLFVVTLVLLLAVARAQDGAGLAPLPAMDAGTGFQVTFSNGGILLSMFIYLVALLWH*
Homology
[Close]
BLAST of MELO3C015203 vs. TrEMBL
Match: A0A0A0LXI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613500 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-25
Identity = 63/67 (94.03%), Postives = 63/67 (94.03%), Query Frame = 1 

Query: 1  MAGFSIHRAMWLFVVTLVLLLAVARAQDGAGLAPLPAMDAGTGFQVTFSNGGILLSMFIY 60
          MAGFSIHRA WLFVVTLVLLLAVARAQDGAGLAPLPAMDAGTGFQVTFSNGGILLSMFI 
Sbjct: 1  MAGFSIHRAKWLFVVTLVLLLAVARAQDGAGLAPLPAMDAGTGFQVTFSNGGILLSMFIS 60

Query: 61 LVALLWH 68
          LV LL H
Sbjct: 61 LVVLLLH 67

[Close]
BLAST of MELO3C015203 vs. NCBI nr
Match: gi|700211382|gb|KGN66478.1| (hypothetical protein Csa_1G613500 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-25
Identity = 63/67 (94.03%), Postives = 63/67 (94.03%), Query Frame = 1 

Query: 1  MAGFSIHRAMWLFVVTLVLLLAVARAQDGAGLAPLPAMDAGTGFQVTFSNGGILLSMFIY 60
          MAGFSIHRA WLFVVTLVLLLAVARAQDGAGLAPLPAMDAGTGFQVTFSNGGILLSMFI 
Sbjct: 1  MAGFSIHRAKWLFVVTLVLLLAVARAQDGAGLAPLPAMDAGTGFQVTFSNGGILLSMFIS 60

Query: 61 LVALLWH 68
          LV LL H
Sbjct: 61 LVVLLLH 67

The following BLAST results are available for this feature:
BLAST of MELO3C015203 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXI4_CUCSA1.2e-2594.03Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613500 PE=4 SV=1[more]
BLAST of MELO3C015203 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211382|gb|KGN66478.1|1.7e-2594.03hypothetical protein Csa_1G613500 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU61464melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015203T1MELO3C015203T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU61464MU61464transcribed_cluster