MELO3C013106.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013106.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr01 : 12451390 .. 12452233 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGGTTGCAGTTTGACGACGACCGTCATCAAAAGTCGAATAAAGTTGTTGAAGAAGACGTTTCAGGCCATTGCGGAGATGAGGGGCCCAACAGGTAGTTGCTTCGGCTGGAACGATGACGTCAAGTGCATCATCATCGAGAGGGACGTGTTCGATCATTGGGTCCAGGTAAGAGTATGAACATAATTGTATGACTAACTAGATTTTATGGAATACTAATTGCTTTGTTATTTTATTTTATTTTTTTTGTGTTTTTTTCTAGATGCATCCTGCAGCAAAAAGACTCCTGAACAAGCCATTTTTGCATTACAATGCACTGTCGTACGTGTTCGAGAAAGATCAAGCCACAGGGGCCCATGCAGAGACCTTTGCAGACATCGATTCGAACATGTCGGCCGACTACGATAGTGTCCCCACAAAGGATGGCATCGACATGGAGTTCCCCGTTATGTGCAGCCCGAGGATGAACATGTCCCCTAAAGACATGATGGGCGGTAGATCAGGTCGGTCGAGCGATGGTAGAACGGGCTCTAGCGAACAGAAAAGGAAGCACTCCATGCAGCAGTTTGAGACGTACGACCTGATTCGCGAATGTATGGAGGCTGCGACTGATCAGCTAAGAACCATTGCAGAATGGCCGAAGAAAGCTATGAGCTGGGAGGACACGATGGCAGCGCAGGTGATTGAGCTTATAAAGGCCATCCCGAACCTTACTATGGCGGAGAAGAGTAAATGCGTCATGCTAGTGAATCAAAAGGTGTCGCTCATGAGAAGCTTCATCAAGATGCCCGATTTGATGAAGGCCGCTTACTGTAGGGTCCTCCTTGGCGGTGACCCGTGA

mRNA sequence

ATGGTCGGTTGCAGTTTGACGACGACCGTCATCAAAAGTCGAATAAAGTTGTTGAAGAAGACGTTTCAGGCCATTGCGGAGATGAGGGGCCCAACAGGTAGTTGCTTCGGCTGGAACGATGACGTCAAGTGCATCATCATCGAGAGGGACGTGTTCGATCATTGGGTCCAGATGCATCCTGCAGCAAAAAGACTCCTGAACAAGCCATTTTTGCATTACAATGCACTGTCGTACGTGTTCGAGAAAGATCAAGCCACAGGGGCCCATGCAGAGACCTTTGCAGACATCGATTCGAACATGTCGGCCGACTACGATAGTGTCCCCACAAAGGATGGCATCGACATGGAGTTCCCCGTTATGTGCAGCCCGAGGATGAACATGTCCCCTAAAGACATGATGGGCGGTAGATCAGGTCGGTCGAGCGATGGTAGAACGGGCTCTAGCGAACAGAAAAGGAAGCACTCCATGCAGCAGTTTGAGACGTACGACCTGATTCGCGAATGTATGGAGGCTGCGACTGATCAGCTAAGAACCATTGCAGAATGGCCGAAGAAAGCTATGAGCTGGGAGGACACGATGGCAGCGCAGGTGATTGAGCTTATAAAGGCCATCCCGAACCTTACTATGGCGGAGAAGAGTAAATGCGTCATGCTAGTGAATCAAAAGGTGTCGCTCATGAGAAGCTTCATCAAGATGCCCGATTTGATGAAGGCCGCTTACTGTAGGGTCCTCCTTGGCGGTGACCCGTGA

Coding sequence (CDS)

ATGGTCGGTTGCAGTTTGACGACGACCGTCATCAAAAGTCGAATAAAGTTGTTGAAGAAGACGTTTCAGGCCATTGCGGAGATGAGGGGCCCAACAGGTAGTTGCTTCGGCTGGAACGATGACGTCAAGTGCATCATCATCGAGAGGGACGTGTTCGATCATTGGGTCCAGATGCATCCTGCAGCAAAAAGACTCCTGAACAAGCCATTTTTGCATTACAATGCACTGTCGTACGTGTTCGAGAAAGATCAAGCCACAGGGGCCCATGCAGAGACCTTTGCAGACATCGATTCGAACATGTCGGCCGACTACGATAGTGTCCCCACAAAGGATGGCATCGACATGGAGTTCCCCGTTATGTGCAGCCCGAGGATGAACATGTCCCCTAAAGACATGATGGGCGGTAGATCAGGTCGGTCGAGCGATGGTAGAACGGGCTCTAGCGAACAGAAAAGGAAGCACTCCATGCAGCAGTTTGAGACGTACGACCTGATTCGCGAATGTATGGAGGCTGCGACTGATCAGCTAAGAACCATTGCAGAATGGCCGAAGAAAGCTATGAGCTGGGAGGACACGATGGCAGCGCAGGTGATTGAGCTTATAAAGGCCATCCCGAACCTTACTATGGCGGAGAAGAGTAAATGCGTCATGCTAGTGAATCAAAAGGTGTCGCTCATGAGAAGCTTCATCAAGATGCCCGATTTGATGAAGGCCGCTTACTGTAGGGTCCTCCTTGGCGGTGACCCGTGA

Protein sequence

MVGCSLTTTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHPAAKRLLNKPFLHYNALSYVFEKDQATGAHAETFADIDSNMSADYDSVPTKDGIDMEFPVMCSPRMNMSPKDMMGGRSGRSSDGRTGSSEQKRKHSMQQFETYDLIRECMEAATDQLRTIAEWPKKAMSWEDTMAAQVIELIKAIPNLTMAEKSKCVMLVNQKVSLMRSFIKMPDLMKAAYCRVLLGGDP

Homology

[Close]

BLAST of MELO3C013106.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 210.7 bits (535), Expect = 5.7e-51
Identity = 105/239 (43.93%), Postives = 162/239 (67.78%), Query Frame = 0


Query: 8   TTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHPAAKRLLN 67
           ++ I   +K LKKT+ AIAEMRGP+ S FGWN++ +CII ERD+FD W++ HPAAK LL+
Sbjct: 64  SSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLH 123

Query: 68  KPFLHYNALSYVFEKDQATGAHAETFADIDSNMSADY-DSVPTKDGIDMEFPVMCSPRMN 127
           K F +Y+ LSYVF KD+ATGA +ETF ++ SN+S  + D++P  D  D + P M S  ++
Sbjct: 124 KSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVH 183

Query: 128 MSPKDMMGGRSGRSSDGRTGSSEQKRKHSMQQFETYDLIRECMEAATDQLRTIAEWPKKA 187
           MSP +M G R+G++S+ R  SS  KRK   +++ET ++IR  ME   +QL+ IA+WPK+ 
Sbjct: 184 MSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEK 243

Query: 188 MSWEDTMAAQVIELIKAIPNLTMAEKSKCVMLVNQKVSLMRSFIKMPDLMKAAYCRVLL 246
            + E  M AQV++ ++ IP L   +++K + ++ + +  +  F+ +P  +K  YC +LL
Sbjct: 244 RAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of MELO3C013106.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 204.5 bits (519), Expect = 4.1e-49
Identity = 108/243 (44.44%), Postives = 154/243 (63.37%), Query Frame = 0


Query: 3   GCSLTTTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHPAA 62
           G ++  + I SRIKL+K+ F A+AEMRGP  S FGWND+ KCI+ E++VFD W   HPAA
Sbjct: 413 GSNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAA 472

Query: 63  KRLLNKPFLHYNALSYVFEKDQATGAHAETFADIDSNMSADYDSVPTKDGIDMEFPVMCS 122
           K LLNK F+HY+ LSYVF KD+ATG  AE+FADI SN    YD+       D +FP M S
Sbjct: 473 KGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYS 532

Query: 123 PRMNMSPKDMMGGRSGRSSDGRTGSSEQKRKHSMQQFETYDLIRECMEAATDQLRTIAEW 182
           P +NMSP D+M  R+ R S+ R  SS  KRK      ++ D++R  +E   +QL  IAEW
Sbjct: 533 PGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEW 592

Query: 183 PKKAMSWEDTMAAQVIELIKAIPNLTMAEKSKCVMLVNQKVSLMRSFIKMPDLMKAAYCR 242
           P            +++  ++AIP LT+ ++ + + ++ + V  M++F+++PD MK  YC 
Sbjct: 593 PILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCS 652

Query: 243 VLL 246
           ++L
Sbjct: 653 LIL 653

[Close]

BLAST of MELO3C013106.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 3.9e-39
Identity = 98/207 (47.34%), Postives = 126/207 (60.87%), Query Frame = 0


Query: 3   GCSLTTTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHPAA 62
           GC++  + I SRIKLLK+ F A+AEMRGP  S FGWND+ KCI+ E+       + HPAA
Sbjct: 54  GCNIHASTIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEK-------ESHPAA 113

Query: 63  KRLLNKPFLHYNALSYVFEKDQATGAHAETFADIDSNMSADYDSVPTKDGIDMEFPVMCS 122
           K LLNK F+HY+ LSYVF KD+ATG  AE FADI SN  A YD+       D  F  M S
Sbjct: 114 KGLLNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYS 173

Query: 123 PRMNMSPKDMMGGRSGRSSDGRTGSSEQKRKHSMQQFETYDLIRECMEAATDQLRTIAEW 182
           PR+NMSP D+M  R+ R S+ R  SS  +RKH+    ++ D++   +    +QL  IAEW
Sbjct: 174 PRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEW 233

Query: 183 PKKAMSWEDTMAAQVIELIK---AIPN 207
           P      + T   Q IEL+K    +PN
Sbjct: 234 P-ILQRQDATQTCQEIELLKKPQPVPN 252

[Close]

BLAST of MELO3C013106.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37
Identity = 94/245 (38.37%), Postives = 143/245 (58.37%), Query Frame = 0


Query: 3   GCSL-TTTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHPA 62
           GC +  TTVI  RIK LK+TFQAIAEM GP  S FGWND+ KCI+ E+++FD+WV+  PA
Sbjct: 375 GCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPA 434

Query: 63  AKRLLNKPFLHYNALSYVFEKDQATGAHAETFADIDSN-MSADYDSVPTKDGIDMEFPVM 122
           AK LLN PF +Y+ L+YVF +D+ATG  AETFAD+ SN     YD     DG + +FP +
Sbjct: 435 AKGLLNNPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDG-NEDFPPV 494

Query: 123 CSPRMNMSPKDMMGGRSGRSSDGRTGSSEQKRKHSMQQFETYDLIRECMEAATDQLRTIA 182
            S  +++   D+   R               RK   Q+    + I   ++   +QLR IA
Sbjct: 495 YSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIA 554

Query: 183 EWPKKAMSWEDTMAAQVIELIKAIPNLTMAEKSKCVMLVNQKVSLMRSFIKMPDLMKAAY 242
           EWP + ++ ++ +  +   +++ +P LT  +++     +  ++  +R F+ MP+  +  +
Sbjct: 555 EWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGF 614

Query: 243 CRVLL 246
           CRVLL
Sbjct: 615 CRVLL 618

[Close]

BLAST of MELO3C013106.2 vs. NCBI nr
Match: KGN50999.1 (hypothetical protein Csa_5G387990 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 88/154 (57.14%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 1   MVGCSLTTTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHP 60
           M GC LTTT+I+S+IKLLKKTFQ I +MR P GS F WN D+KCII ERD+FD+WV+ +P
Sbjct: 1   MFGCKLTTTLIESQIKLLKKTFQTIVKMREPAGSGFEWNGDMKCIIAERDMFDNWVRTYP 60

Query: 61  AAKRLLNKPFLHYNALSYVFEKDQATG---AHAETFADIDSNMSADYDSVPTKDGIDMEF 120
           A K LLNK F HY  LSYVF KD   G    ++ T      + SA    VPT+DG+ +EF
Sbjct: 61  ATKGLLNKVFPHYGMLSYVFGKDHTKGPVWRYSRTSGPTCKDPSA---CVPTEDGLKIEF 120

Query: 121 PVMCSPRMNMSPKDMMGGRSGRSSDGRTGSSEQK 152
           P MCSPRMN+S  DMM G+SGR SD R+G + +K
Sbjct: 121 PTMCSPRMNLSLDDMMVGQSGRFSDCRSGLTIKK 151

[Close]

BLAST of MELO3C013106.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.8e-51
Identity = 105/239 (43.93%), Postives = 162/239 (67.78%), Query Frame = 0


Query: 8   TTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHPAAKRLLN 67
           ++ I   +K LKKT+ AIAEMRGP+ S FGWN++ +CII ERD+FD W++ HPAAK LL+
Sbjct: 64  SSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLH 123

Query: 68  KPFLHYNALSYVFEKDQATGAHAETFADIDSNMSADY-DSVPTKDGIDMEFPVMCSPRMN 127
           K F +Y+ LSYVF KD+ATGA +ETF ++ SN+S  + D++P  D  D + P M S  ++
Sbjct: 124 KSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVH 183

Query: 128 MSPKDMMGGRSGRSSDGRTGSSEQKRKHSMQQFETYDLIRECMEAATDQLRTIAEWPKKA 187
           MSP +M G R+G++S+ R  SS  KRK   +++ET ++IR  ME   +QL+ IA+WPK+ 
Sbjct: 184 MSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEK 243

Query: 188 MSWEDTMAAQVIELIKAIPNLTMAEKSKCVMLVNQKVSLMRSFIKMPDLMKAAYCRVLL 246
            + E  M AQV++ ++ IP L   +++K + ++ + +  +  F+ +P  +K  YC +LL
Sbjct: 244 RAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of MELO3C013106.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 108/243 (44.44%), Postives = 154/243 (63.37%), Query Frame = 0


Query: 3   GCSLTTTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHPAA 62
           G ++  + I SRIKL+K+ F A+AEMRGP  S FGWND+ KCI+ E++VFD W   HPAA
Sbjct: 413 GSNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAA 472

Query: 63  KRLLNKPFLHYNALSYVFEKDQATGAHAETFADIDSNMSADYDSVPTKDGIDMEFPVMCS 122
           K LLNK F+HY+ LSYVF KD+ATG  AE+FADI SN    YD+       D +FP M S
Sbjct: 473 KGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYS 532

Query: 123 PRMNMSPKDMMGGRSGRSSDGRTGSSEQKRKHSMQQFETYDLIRECMEAATDQLRTIAEW 182
           P +NMSP D+M  R+ R S+ R  SS  KRK      ++ D++R  +E   +QL  IAEW
Sbjct: 533 PGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEW 592

Query: 183 PKKAMSWEDTMAAQVIELIKAIPNLTMAEKSKCVMLVNQKVSLMRSFIKMPDLMKAAYCR 242
           P            +++  ++AIP LT+ ++ + + ++ + V  M++F+++PD MK  YC 
Sbjct: 593 PILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCS 652

Query: 243 VLL 246
           ++L
Sbjct: 653 LIL 653

[Close]

BLAST of MELO3C013106.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39
Identity = 98/207 (47.34%), Postives = 126/207 (60.87%), Query Frame = 0


Query: 3   GCSLTTTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHPAA 62
           GC++  + I SRIKLLK+ F A+AEMRGP  S FGWND+ KCI+ E+       + HPAA
Sbjct: 54  GCNIHASTIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEK-------ESHPAA 113

Query: 63  KRLLNKPFLHYNALSYVFEKDQATGAHAETFADIDSNMSADYDSVPTKDGIDMEFPVMCS 122
           K LLNK F+HY+ LSYVF KD+ATG  AE FADI SN  A YD+       D  F  M S
Sbjct: 114 KGLLNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYS 173

Query: 123 PRMNMSPKDMMGGRSGRSSDGRTGSSEQKRKHSMQQFETYDLIRECMEAATDQLRTIAEW 182
           PR+NMSP D+M  R+ R S+ R  SS  +RKH+    ++ D++   +    +QL  IAEW
Sbjct: 174 PRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEW 233

Query: 183 PKKAMSWEDTMAAQVIELIK---AIPN 207
           P      + T   Q IEL+K    +PN
Sbjct: 234 P-ILQRQDATQTCQEIELLKKPQPVPN 252

[Close]

BLAST of MELO3C013106.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.2e-38
Identity = 94/245 (38.37%), Postives = 143/245 (58.37%), Query Frame = 0


Query: 3   GCSL-TTTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHPA 62
           GC +  TTVI  RIK LK+TFQAIAEM GP  S FGWND+ KCI+ E+++FD+WV+  PA
Sbjct: 375 GCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPA 434

Query: 63  AKRLLNKPFLHYNALSYVFEKDQATGAHAETFADIDSN-MSADYDSVPTKDGIDMEFPVM 122
           AK LLN PF +Y+ L+YVF +D+ATG  AETFAD+ SN     YD     DG + +FP +
Sbjct: 435 AKGLLNNPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDG-NEDFPPV 494

Query: 123 CSPRMNMSPKDMMGGRSGRSSDGRTGSSEQKRKHSMQQFETYDLIRECMEAATDQLRTIA 182
            S  +++   D+   R               RK   Q+    + I   ++   +QLR IA
Sbjct: 495 YSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIA 554

Query: 183 EWPKKAMSWEDTMAAQVIELIKAIPNLTMAEKSKCVMLVNQKVSLMRSFIKMPDLMKAAY 242
           EWP + ++ ++ +  +   +++ +P LT  +++     +  ++  +R F+ MP+  +  +
Sbjct: 555 EWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGF 614

Query: 243 CRVLL 246
           CRVLL
Sbjct: 615 CRVLL 618

[Close]

BLAST of MELO3C013106.2 vs. TrEMBL
Match: tr|A0A0A0KQ83|A0A0A0KQ83_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387990 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.8e-37
Identity = 88/154 (57.14%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 1   MVGCSLTTTVIKSRIKLLKKTFQAIAEMRGPTGSCFGWNDDVKCIIIERDVFDHWVQMHP 60
           M GC LTTT+I+S+IKLLKKTFQ I +MR P GS F WN D+KCII ERD+FD+WV+ +P
Sbjct: 1   MFGCKLTTTLIESQIKLLKKTFQTIVKMREPAGSGFEWNGDMKCIIAERDMFDNWVRTYP 60

Query: 61  AAKRLLNKPFLHYNALSYVFEKDQATG---AHAETFADIDSNMSADYDSVPTKDGIDMEF 120
           A K LLNK F HY  LSYVF KD   G    ++ T      + SA    VPT+DG+ +EF
Sbjct: 61  ATKGLLNKVFPHYGMLSYVFGKDHTKGPVWRYSRTSGPTCKDPSA---CVPTEDGLKIEF 120

Query: 121 PVMCSPRMNMSPKDMMGGRSGRSSDGRTGSSEQK 152
           P MCSPRMN+S  DMM G+SGR SD R+G + +K
Sbjct: 121 PTMCSPRMNLSLDDMMVGQSGRFSDCRSGLTIKK 151

The following BLAST results are available for this feature:

BLAST of MELO3C013106.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441954.1	5.7e-51	43.93	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
ADN34114.1	4.1e-49	44.44	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008459131.1	3.9e-39	47.34	PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]	[more]
ADN33754.1	1.2e-37	38.37	retrotransposon protein [Cucumis melo subsp. melo]	[more]
KGN50999.1	2.8e-37	57.14	hypothetical protein Csa_5G387990 [Cucumis sativus]	[more]

BLAST of MELO3C013106.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C013106.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C013106.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	3.8e-51	43.93	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|E5GCB5\|E5GCB5_CUCME	2.7e-49	44.44	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3C8Z4\|A0A1S3C8Z4_CUCME	2.6e-39	47.34	uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=...	[more]
tr\|E5GBB2\|E5GBB2_CUCME	8.2e-38	38.37	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0KQ83\|A0A0A0KQ83_CUCSA	1.8e-37	57.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387990 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013106.2.1	MELO3C013106.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..156
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 5..211

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013106.2	Silver-seed gourd	carmedB0880
MELO3C013106.2	Silver-seed gourd	carmedB0897
MELO3C013106.2	Cucumber (Chinese Long) v3	cucmedB528
MELO3C013106.2	Watermelon (97103) v2	medwmbB211
MELO3C013106.2	Wax gourd	medwgoB256
MELO3C013106.2	Cucumber (Gy14) v2	cgybmedB457
MELO3C013106.2	Cucurbita maxima (Rimu)	cmamedB019
MELO3C013106.2	Cucurbita maxima (Rimu)	cmamedB455
MELO3C013106.2	Cucurbita moschata (Rifu)	cmomedB007
MELO3C013106.2	Cucurbita moschata (Rifu)	cmomedB443
MELO3C013106.2	Cucurbita pepo (Zucchini)	cpemedB595
MELO3C013106.2	Cucurbita pepo (Zucchini)	cpemedB847
MELO3C013106.2	Bottle gourd (USVL1VR-Ls)	lsimedB196
MELO3C013106.2	Watermelon (Charleston Gray)	medwcgB172
MELO3C013106.2	Watermelon (97103) v1	medwmB197