MELO3C007475 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007475
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Protein with domains of unknown function (DUF26 and DUF1204)
Location	chr8 : 3033058 .. 3034421 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTACAAACGGTAGAGTTGGTTGAAACGAGATCCCTTTCTGAAAAGGCCATGGAAATTTACGATGCGAGAACAGGAAGCAGATTGCTTCTTGTGTTGTTAATTTTGATGCTTCATGTTGCTTCGTGTTTTGCAGATTCTAACAAGGCTCCCGAGAGGCCGTCTTTCTGGAATTTTATTCAAGAAACTGTTGCCATTTTGAAGAAATCTCATTCCACTCCATTGGACAAAATCAGAAGTATCATTCACCAAATGCAGTTCCAGTTTTTCCCTCCCAATTTGGAGTAACTTCCTTCCCTTTAAGATACACTGTTTTCCACATTATTGTTTTTCCTCCTAACTGTTTGTATTTACCTTCATTTTGTTCTATTTGGCTTCCTAAATTGTAGATCAGAGGGTTTGATATGTCAATATATCCATAAAATATTATGTTAAAAATCACAGGTCCTTAAAATTTCATGAAAAATAACAATTTAGTTACCAACTAGTCGATTTAGTCCAAATTAATCTTTTTATGAAAAATACTTTTGAAGTTTAATGAAATTTCTTACCTACGAAGACCGAATAATTTTCTTTAATAAACTAAAGATGGATTAAGTTGTTTAATAAAGAAAAAAATTCATGACAAAGACTAAATTATTTACAAAGTAGAAGAAGAGATAAATGGTTGCTCATTAAGTGTACGAAAATTGTTAAAATTTTCAGTGTAGTCATAATTAACTAAGTTTAAGAACTAAATTTTATTTATGTGAAAGTTTAAGGAATAAATTATTATAAACTTTAGAATAAACTACTAAATAATTACCAACTATAGATTGAAAAACAAAATTGTTAACTTTGTTTCTTTCTCTGTCTTTTTATTTGTCTGGTTCACAAGAATATCAAATATTTTACCAATCCGTCGTAGAAATACTGATAGGACAATGAATTTTAACCCTTTTATTATATCTAATAGGTCAAGTATCAGACTATTATTTTATCTTATTAAGTCATTTTTATATAGAAAAAATTGTGTTATGCAGTTTTAGGAGTAGTGATGAAACAAAGGGTGGTGTGGTTGATGAAGTGAAAGAAGCAGTGGAAAAGAGCTTTGAAGTAAGCAAAGATGCAGTTGAAGAATCTGCAAAATCTGCAGCAAAAGTTATGGAGGAAGCAGTAGACAAAGTTAAAGAGAACTTGGTAGATAATAAGGACAAGGTCAAGAACAAACATGATGAGCTTTGATCATCCATGTCCACTTTCTTAAGACTCTGTTACTGTTCTTTGAAACTTAGATTCAAATTCAATAGGCTTCTCGTGACAGATGAGGATCACTAATTATTAACCTTCTACCATGAAGGATGAAGTATATTTGCCTTTTTGTCT

mRNA sequence

AACTACAAACGGTAGAGTTGGTTGAAACGAGATCCCTTTCTGAAAAGGCCATGGAAATTTACGATGCGAGAACAGGAAGCAGATTGCTTCTTGTGTTGTTAATTTTGATGCTTCATGTTGCTTCGTGTTTTGCAGATTCTAACAAGGCTCCCGAGAGGCCGTCTTTCTGGAATTTTATTCAAGAAACTGTTGCCATTTTGAAGAAATCTCATTCCACTCCATTGGACAAAATCAGAAGTATCATTCACCAAATGCAGTTCCAGTTTTTCCCTCCCAATTTGGATTTTAGGAGTAGTGATGAAACAAAGGGTGGTGTGGTTGATGAAGTGAAAGAAGCAGTGGAAAAGAGCTTTGAAGTAAGCAAAGATGCAGTTGAAGAATCTGCAAAATCTGCAGCAAAAGTTATGGAGGAAGCAGTAGACAAAGTTAAAGAGAACTTGGTAGATAATAAGGACAAGGTCAAGAACAAACATGATGAGCTTTGATCATCCATGTCCACTTTCTTAAGACTCTGTTACTGTTCTTTGAAACTTAGATTCAAATTCAATAGGCTTCTCGTGACAGATGAGGATCACTAATTATTAACCTTCTACCATGAAGGATGAAGTATATTTGCCTTTTTGTCT

Coding sequence (CDS)

ATGGAAATTTACGATGCGAGAACAGGAAGCAGATTGCTTCTTGTGTTGTTAATTTTGATGCTTCATGTTGCTTCGTGTTTTGCAGATTCTAACAAGGCTCCCGAGAGGCCGTCTTTCTGGAATTTTATTCAAGAAACTGTTGCCATTTTGAAGAAATCTCATTCCACTCCATTGGACAAAATCAGAAGTATCATTCACCAAATGCAGTTCCAGTTTTTCCCTCCCAATTTGGATTTTAGGAGTAGTGATGAAACAAAGGGTGGTGTGGTTGATGAAGTGAAAGAAGCAGTGGAAAAGAGCTTTGAAGTAAGCAAAGATGCAGTTGAAGAATCTGCAAAATCTGCAGCAAAAGTTATGGAGGAAGCAGTAGACAAAGTTAAAGAGAACTTGGTAGATAATAAGGACAAGGTCAAGAACAAACATGATGAGCTTTGA

Protein sequence

MEIYDARTGSRLLLVLLILMLHVASCFADSNKAPERPSFWNFIQETVAILKKSHSTPLDKIRSIIHQMQFQFFPPNLDFRSSDETKGGVVDEVKEAVEKSFEVSKDAVEESAKSAAKVMEEAVDKVKENLVDNKDKVKNKHDEL*

Homology

[Close]

BLAST of MELO3C007475 vs. TrEMBL
Match: A0A0A0KFX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487000 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.1e-65
Identity = 130/144 (90.28%), Postives = 136/144 (94.44%), Query Frame = 1


Query: 1   MEIYDARTGSRLLLVLLILMLHVASCFADSNKAPERPSFWNFIQETVAILKKSHSTPLDK 60
           MEI +ART S LLLVLLILMLHVASCFADSN APERPSFWNFIQETVAILKKSHSTPL+K
Sbjct: 1   MEICNARTRSSLLLVLLILMLHVASCFADSNNAPERPSFWNFIQETVAILKKSHSTPLEK 60

Query: 61  IRSIIHQMQFQFFPPNLDFRSSDETKGGVVDEVKEAVEKSFEVSKDAVEESAKSAAKVME 120
           I+S+IHQMQ QFFPPNLDFRSSDETKGGVVDE+KEAVEKSF  SKDAVEESAKSAAKVME
Sbjct: 61  IKSLIHQMQLQFFPPNLDFRSSDETKGGVVDEMKEAVEKSFGASKDAVEESAKSAAKVME 120

Query: 121 EAVDKVKENLVDNKDKVKNKHDEL 145
           EAVDKVKENL DNKD+VKNKHDEL
Sbjct: 121 EAVDKVKENLADNKDRVKNKHDEL 144

[Close]

BLAST of MELO3C007475 vs. TrEMBL
Match: B9T5U8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0425550 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.9e-22
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 1


Query: 7   RTGSRLLLVLLI-LMLHVASCFADSNK-----APERPSFWNFIQETVAILKKSHSTPLDK 66
           RT +   + LLI + L + S   D  +       E+P     + +T+  LKKSH +  DK
Sbjct: 7   RTSTAWFIFLLINVSLQILSVVGDGGQHVAQNMQEKPPLVKMVMDTLTTLKKSHKSSWDK 66

Query: 67  IRSIIHQMQFQFFPPNLDFRSSDETKGGVVDEVKEAVEKSFEVSKDAVEESAKSAAKVME 126
           ++++IH  Q QFFPPNLDFR  D+   G    +KEA EKS EV K   EESAKSAAKV+ 
Sbjct: 67  LKAMIHGFQLQFFPPNLDFRGQDQEVDGAGGRMKEAAEKSLEVGKVTAEESAKSAAKVVG 126

Query: 127 EAVDKVKENLVDNKDKVKNKHDEL 145
           EAV KVK+ +  + D+  ++HDEL
Sbjct: 127 EAVHKVKDKI--SNDEESHQHDEL 148

[Close]

BLAST of MELO3C007475 vs. TrEMBL
Match: G7LBA9_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_8g091950 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17
Identity = 49/112 (43.75%), Postives = 75/112 (66.96%), Query Frame = 1


Query: 33  APERPSFWNFIQETVAILKKSHSTPLDKIRSIIHQMQFQFFPPNLDFRSSDETKGGVVDE 92
           +PE+P     + +TV++L+KSH +  +KI+++IH +Q QF PPNLDFR   E +G     
Sbjct: 34  SPEKPRLTKLLIDTVSLLRKSHESSWEKIKTVIHDLQMQFSPPNLDFRGKVEHEG----- 93

Query: 93  VKEAVEKSFEVSKDAVEESAKSAAKVMEEAVDKVKENLVDNKDKVKNKHDEL 145
           VKEAVE+SF+ SK++VE +AKSAA+ + E +   KE + ++ D  K+   EL
Sbjct: 94  VKEAVERSFDKSKESVEGTAKSAAEFVGETIHNTKEKVKESTDSDKDSKAEL 140

[Close]

BLAST of MELO3C007475 vs. TrEMBL
Match: K7KR19_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G184300 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.3e-17
Identity = 56/148 (37.84%), Postives = 82/148 (55.41%), Query Frame = 1


Query: 6   ARTGSRLLLVLLILMLHVASCFADSNKA--------PERPSFWNFIQETVAILKKSHSTP 65
           +RT    LL  ++++L       D  K         PE+P     + +TV++L+KSH + 
Sbjct: 5   SRTILFFLLFCVLIILQFQRATPDHEKGGQNVAQGHPEKPLLSKMLMDTVSLLRKSHQSS 64

Query: 66  LDKIRSIIHQMQFQFFPPNLDFRSSDETK-GGVVDEVKEAVEKSFEVSKDAVEESAKSAA 125
            +KI+++IH +Q QF PPNLDFR +   +  G     KEAVEK F  SK+ VEESA+ AA
Sbjct: 65  WEKIKTVIHDLQMQFSPPNLDFRGTGWVEYDGSKGTFKEAVEKIFGKSKETVEESAEGAA 124

Query: 126 KVMEEAVDKVKENLVDNKDKVKNKHDEL 145
           KV+EEA+ K  E + ++         EL
Sbjct: 125 KVVEEAIHKTTEKVKESSHSEHESKAEL 152

[Close]

BLAST of MELO3C007475 vs. TrEMBL
Match: A0A0B2S0N9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_003893 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.3e-17
Identity = 56/148 (37.84%), Postives = 82/148 (55.41%), Query Frame = 1


Query: 6   ARTGSRLLLVLLILMLHVASCFADSNKA--------PERPSFWNFIQETVAILKKSHSTP 65
           +RT    LL  ++++L       D  K         PE+P     + +TV++L+KSH + 
Sbjct: 5   SRTILFFLLFCVLIILQFQRATPDHEKGGQNVAQGHPEKPLLSKMLMDTVSLLRKSHQSS 64

Query: 66  LDKIRSIIHQMQFQFFPPNLDFRSSDETK-GGVVDEVKEAVEKSFEVSKDAVEESAKSAA 125
            +KI+++IH +Q QF PPNLDFR +   +  G     KEAVEK F  SK+ VEESA+ AA
Sbjct: 65  WEKIKTVIHDLQMQFSPPNLDFRGTGWVEYDGSKGTFKEAVEKIFGKSKETVEESAEGAA 124

Query: 126 KVMEEAVDKVKENLVDNKDKVKNKHDEL 145
           KV+EEA+ K  E + ++         EL
Sbjct: 125 KVVEEAIHKTTEKVKESSHSEHESKAEL 152

[Close]

BLAST of MELO3C007475 vs. TAIR10
Match: AT5G64820.1 (AT5G64820.1 unknown protein)

HSP 1 Score: 67.4 bits (163), Expect = 8.3e-12
Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1


Query: 7   RTGSRLLLVLLILMLHVASCFADSNKAPERPSFWNFIQETVAIL-KKSHSTPLDKIRSII 66
           R G  +  +++IL+  V++  A+S+ A ++    + ++    I   K   +  + I+  +
Sbjct: 8   RFGVSVFCIIIILISGVSADGAESDSAAKKEENPSIVKIISGIFGNKFPPSSWELIQGAM 67

Query: 67  HQMQFQFFPPNLDFRSSDETKGGVVDE-----VKEAVEKSFEVSKDAVEESAKSAAKVME 126
            ++Q + +PPNLDFRS+ + K  + +E     V+EA  +S EVSK+A+EESAK A  V+ 
Sbjct: 68  QKIQMKLYPPNLDFRSNSD-KSNIEEEDKAEKVREAATRSLEVSKEAIEESAKLAGDVVG 127

Query: 127 EAVDKVKENLVDNKDKVKNKHDEL 145
           E V K  E +       +  HDE+
Sbjct: 128 EVVQKTAEKVTK-----QTSHDEM 145

[Close]

BLAST of MELO3C007475 vs. TAIR10
Match: AT1G16850.1 (AT1G16850.1 unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.6e-10
Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 1


Query: 12  LLLVLLILMLHVASCFADSNKAPERPSFWNFIQETVAILKKSHSTPLDKIRSIIHQMQFQ 71
           +   L +L ++V S   DS +A   PS        +  +K+S      K+R  + + Q  
Sbjct: 19  IFFFLFVLSVNV-SADVDSERAV--PSEDKTTTVWLTKIKRSGKNYWAKVRETLDRGQSH 78

Query: 72  FFPPNLDFRSSDETKGGVVDEVKEAVEKSFEVSKDAVEESAKSAAKVMEEAVDKVKENL 131
           FFPPN  F   ++   G  + +KEA  +SFE SK  VEE+A+SAA+V+ +  + VKE +
Sbjct: 79  FFPPNTYFTGKNDAPMGAGENMKEAATRSFEHSKATVEEAARSAAEVVSDTAEAVKEKV 134

[Close]

BLAST of MELO3C007475 vs. NCBI nr
Match: gi|659079214|ref|XP_008440136.1| (PREDICTED: uncharacterized protein LOC103484692 [Cucumis melo])

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-73
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1


Query: 1   MEIYDARTGSRLLLVLLILMLHVASCFADSNKAPERPSFWNFIQETVAILKKSHSTPLDK 60
           MEIYDARTGSRLLLVLLILMLHVASCFADSNKAPERPSFWNFIQETVAILKKSHSTPLDK
Sbjct: 1   MEIYDARTGSRLLLVLLILMLHVASCFADSNKAPERPSFWNFIQETVAILKKSHSTPLDK 60

Query: 61  IRSIIHQMQFQFFPPNLDFRSSDETKGGVVDEVKEAVEKSFEVSKDAVEESAKSAAKVME 120
           IRSIIHQMQFQFFPPNLDFRSSDETKGGVVDEVKEAVEKSFEVSKDAVEESAKSAAKVME
Sbjct: 61  IRSIIHQMQFQFFPPNLDFRSSDETKGGVVDEVKEAVEKSFEVSKDAVEESAKSAAKVME 120

Query: 121 EAVDKVKENLVDNKDKVKNKHDEL 145
           EAVDKVKENLVDNKDKVKNKHDEL
Sbjct: 121 EAVDKVKENLVDNKDKVKNKHDEL 144

[Close]

BLAST of MELO3C007475 vs. NCBI nr
Match: gi|778718013|ref|XP_011657792.1| (PREDICTED: uncharacterized protein LOC105435898 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 1.6e-65
Identity = 130/144 (90.28%), Postives = 136/144 (94.44%), Query Frame = 1


Query: 1   MEIYDARTGSRLLLVLLILMLHVASCFADSNKAPERPSFWNFIQETVAILKKSHSTPLDK 60
           MEI +ART S LLLVLLILMLHVASCFADSN APERPSFWNFIQETVAILKKSHSTPL+K
Sbjct: 1   MEICNARTRSSLLLVLLILMLHVASCFADSNNAPERPSFWNFIQETVAILKKSHSTPLEK 60

Query: 61  IRSIIHQMQFQFFPPNLDFRSSDETKGGVVDEVKEAVEKSFEVSKDAVEESAKSAAKVME 120
           I+S+IHQMQ QFFPPNLDFRSSDETKGGVVDE+KEAVEKSF  SKDAVEESAKSAAKVME
Sbjct: 61  IKSLIHQMQLQFFPPNLDFRSSDETKGGVVDEMKEAVEKSFGASKDAVEESAKSAAKVME 120

Query: 121 EAVDKVKENLVDNKDKVKNKHDEL 145
           EAVDKVKENL DNKD+VKNKHDEL
Sbjct: 121 EAVDKVKENLADNKDRVKNKHDEL 144

[Close]

BLAST of MELO3C007475 vs. NCBI nr
Match: gi|255585887|ref|XP_002533617.1| (PREDICTED: uncharacterized protein LOC8276123 [Ricinus communis])

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 1


Query: 7   RTGSRLLLVLLI-LMLHVASCFADSNK-----APERPSFWNFIQETVAILKKSHSTPLDK 66
           RT +   + LLI + L + S   D  +       E+P     + +T+  LKKSH +  DK
Sbjct: 7   RTSTAWFIFLLINVSLQILSVVGDGGQHVAQNMQEKPPLVKMVMDTLTTLKKSHKSSWDK 66

Query: 67  IRSIIHQMQFQFFPPNLDFRSSDETKGGVVDEVKEAVEKSFEVSKDAVEESAKSAAKVME 126
           ++++IH  Q QFFPPNLDFR  D+   G    +KEA EKS EV K   EESAKSAAKV+ 
Sbjct: 67  LKAMIHGFQLQFFPPNLDFRGQDQEVDGAGGRMKEAAEKSLEVGKVTAEESAKSAAKVVG 126

Query: 127 EAVDKVKENLVDNKDKVKNKHDEL 145
           EAV KVK+ +  + D+  ++HDEL
Sbjct: 127 EAVHKVKDKI--SNDEESHQHDEL 148

[Close]

BLAST of MELO3C007475 vs. NCBI nr
Match: gi|357519649|ref|XP_003630113.1| (hypothetical protein MTR_8g091950 [Medicago truncatula])

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17
Identity = 49/112 (43.75%), Postives = 75/112 (66.96%), Query Frame = 1


Query: 33  APERPSFWNFIQETVAILKKSHSTPLDKIRSIIHQMQFQFFPPNLDFRSSDETKGGVVDE 92
           +PE+P     + +TV++L+KSH +  +KI+++IH +Q QF PPNLDFR   E +G     
Sbjct: 34  SPEKPRLTKLLIDTVSLLRKSHESSWEKIKTVIHDLQMQFSPPNLDFRGKVEHEG----- 93

Query: 93  VKEAVEKSFEVSKDAVEESAKSAAKVMEEAVDKVKENLVDNKDKVKNKHDEL 145
           VKEAVE+SF+ SK++VE +AKSAA+ + E +   KE + ++ D  K+   EL
Sbjct: 94  VKEAVERSFDKSKESVEGTAKSAAEFVGETIHNTKEKVKESTDSDKDSKAEL 140

[Close]

BLAST of MELO3C007475 vs. NCBI nr
Match: gi|1009146583|ref|XP_015890947.1| (PREDICTED: uncharacterized protein LOC107425463 [Ziziphus jujuba])

HSP 1 Score: 97.1 bits (240), Expect = 2.8e-17
Identity = 57/148 (38.51%), Postives = 86/148 (58.11%), Query Frame = 1


Query: 6   ARTGSRLLLVLLILMLHVASCFADSNKAP----ERPSFWNFIQETVAILKKSHSTPLDKI 65
           +R  + LL   +++ +   S   +S        ++PS    + +T+  LK+SH     K+
Sbjct: 5   SRATAILLFWFMVVSIQFPSTIGESQHVDHIQDQKPSLVKTVLDTITSLKESHQDSWGKL 64

Query: 66  RSIIHQMQFQFFPPNLDFRSSDETK-------GGVVDEVKEAVEKSFEVSKDAVEESAKS 125
           ++IIH +Q +FFPPNLDFR +DE K       G   D+VKEAVEKSF  SK+ VEE+AK+
Sbjct: 65  KTIIHGIQLKFFPPNLDFRGADERKRESGTAVGEAGDKVKEAVEKSFHTSKETVEETAKT 124

Query: 126 AAKVMEEAV----DKVKENLVDNKDKVK 139
           AA+V+ E V     KVKE + D + + +
Sbjct: 125 AAEVVGETVHKGAKKVKETVSDKESEAE 152

The following BLAST results are available for this feature:

BLAST of MELO3C007475 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFX9_CUCSA	1.1e-65	90.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487000 PE=4 SV=1	[more]
B9T5U8_RICCO	9.9e-22	43.75	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0425550 PE=4 SV=1	[more]
G7LBA9_MEDTR	1.1e-17	43.75	Uncharacterized protein OS=Medicago truncatula GN=MTR_8g091950 PE=4 SV=1	[more]
K7KR19_SOYBN	7.3e-17	37.84	Uncharacterized protein OS=Glycine max GN=GLYMA_05G184300 PE=4 SV=1	[more]
A0A0B2S0N9_GLYSO	7.3e-17	37.84	Uncharacterized protein OS=Glycine soja GN=glysoja_003893 PE=4 SV=1	[more]

BLAST of MELO3C007475 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64820.1	8.3e-12	31.25	unknown protein	[more]
AT1G16850.1	4.6e-10	33.61	unknown protein	[more]

BLAST of MELO3C007475 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079214\|ref\|XP_008440136.1\|	1.6e-73	100.00	PREDICTED: uncharacterized protein LOC103484692 [Cucumis melo]	[more]
gi\|778718013\|ref\|XP_011657792.1\|	1.6e-65	90.28	PREDICTED: uncharacterized protein LOC105435898 [Cucumis sativus]	[more]
gi\|255585887\|ref\|XP_002533617.1\|	1.4e-21	43.75	PREDICTED: uncharacterized protein LOC8276123 [Ricinus communis]	[more]
gi\|357519649\|ref\|XP_003630113.1\|	1.6e-17	43.75	hypothetical protein MTR_8g091950 [Medicago truncatula]	[more]
gi\|1009146583\|ref\|XP_015890947.1\|	2.8e-17	38.51	PREDICTED: uncharacterized protein LOC107425463 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU61183	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007475T1	MELO3C007475T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU61183	MU61183	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 109..136 scor
None	No IPR available	PANTHER	PTHR35463	FAMILY NOT NAMED	coord: 12..144 score: 4.5
None	No IPR available	PANTHER	PTHR35463:SF1	SUBFAMILY NOT NAMED	coord: 12..144 score: 4.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007475	Csa6G487000	Cucumber (Chinese Long) v2	cumeB503
MELO3C007475	Cla008492	Watermelon (97103) v1	mewmB573
MELO3C007475	ClCG01G016050	Watermelon (Charleston Gray)	mewcgB514
MELO3C007475	Cla97C01G015040	Watermelon (97103) v2	mewmbB513
MELO3C007475	CSPI06G27200	Wild cucumber (PI 183967)	cpimeB508
MELO3C007475	CmaCh03G010430	Cucurbita maxima (Rimu)	cmameB617
MELO3C007475	CmoCh03G010420	Cucurbita moschata (Rifu)	cmomeB605
MELO3C007475	Lsi01G010750	Bottle gourd (USVL1VR-Ls)	lsimeB156
MELO3C007475	Cp4.1LG10g03030	Cucurbita pepo (Zucchini)	cpemeB060
MELO3C007475	CsGy6G026510	Cucumber (Gy14) v2	cgybmeB444
MELO3C007475	Carg00902	Silver-seed gourd	carmeB0414
MELO3C007475	CsaV3_6G042330	Cucumber (Chinese Long) v3	cucmeB517

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007475	Wild cucumber (PI 183967)	cpimeB159
MELO3C007475	Cucumber (Chinese Long) v2	cumeB159
MELO3C007475	Cucurbita pepo (Zucchini)	cpemeB449
MELO3C007475	Silver-seed gourd	carmeB0807
MELO3C007475	Cucumber (Chinese Long) v3	cucmeB161
MELO3C007475	Wax gourd	mewgoB632
MELO3C007475	Cucurbita moschata (Rifu)	cmomeB793
MELO3C007475	Melon (DHL92) v3.5.1	memeB058
MELO3C007475	Cucumber (Gy14) v1	cgymeB131
MELO3C007475	Cucumber (Gy14) v1	cgymeB425
MELO3C007475	Cucurbita maxima (Rimu)	cmameB809