MELO3C006412 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006412
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	60S ribosomal protein L14, putative
Location	chr6 : 3078345 .. 3080271 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATTTGGATCTACGTGGGAATAATAAACCCTAGTTTCGACTTTCGACATTGGCGCTCTCTACTCTTCTTTCTTCTCTCGCCCCTCGCTGAAACTCATCACACACCGACCATGGTAAGCATTCCCCTCCGTAGTTTCTCTCTTTCTAGCTACGAATCTATTGCATTTGTTGCTATAATTTTCTTCATCTGATTTTTTTTCTTCTTCTGAATTTTGTGTTCTTTCATGGCTTCTGTAGCCGTTCAAGAGGTACGTCGAGATCGGAAGAGTCGCTCTCGTCAATTACGGCGAAGACTATGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCAGAACAGAGTATGTTTCTTTTTCCTGCTATTTGTGGTTTTCATCGATGGTTACTTCTAATTCCTGCACATTAGGAAGTCCCGGGATGTTTCACTCTTGTTATAGATTCATTTCTCCTGAATTTGAAGTTTACATTAGGATCCTAAAATATGCTTCTCAATTTCCTGTTATTTATCATTTAAGTAAATCACTCCTCAGCTGCTTCAACCGCATCTACTTGCAGTGGTAATTGTTGAAATAAACTACAACATCGCTTATTTAACTTCAGATTCGTAGAGTAGGTCATTCTCATTGTTTGGATATTATCGATCGTTAGAGTGGTTGCCTATGCAAAATTATGATATTCTCCGACGTCCTCCACCATATTAAATGGATTTTTAGATAATTTTTACTGTTTCTACTACTTCCCATGAATTACAAATGCAGATTCATGTCGCACCAAATCTTTGTGAAACTTTGAAGCTTGCAGTCTTATGGGAAGCTTTTTTTTCTTCCAACTGAATTTTATTCTGCAGTATCAATGATTATTGGTTGAGAAAGAGTGTATCTCGATGAAATTATCATTTGTGTCCACAGTCTTGTTTTTAGTTTTGTATGTTTCGTTGTCATTTCCTGATGTACGTATATCAGTTTTATTTTCTATTAGATTTTATTTATTTTGTTCATTCTATACATATTTTCTATGCTACCATATACAGGCTTTGGTGGATGCTCCTGATATGGTCAGATCTCAAATAAACTTCAAGAGACTTTCTCTCACTGACATTAAAATTGACATTAAGAGAGTCCCTAGGAAGAAGGAACTCATGGAAGCTATGAAGGCTGCTGGTACCCTTAACTTAATTTTGACTTATATAATCCCCATCACACCTGTGTTTCTTGTTTTTGTTTGTTCTAAGTTTAACCTATTGTTTTGATCATGTCAGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGAAGAAAATTACTTGTGAAACAAAGAAGGGCATCACTTAATGATTTCGATAGGTTCAAGCTTATGCTGGCTAAGATAAAGGTTAGTGACAATGTGATTCAATCTGTAGTTTGTTGCTTTCTCTTGTTTGTTCTTTTACGACTTCTTATGCATTGACACATGGAAGAGTGTGAAAGAAGTTGTTTTAAATTCGCATGAAAGTGAGTGAGAGAAGTTTTGTTTAATTTGTCATTAAAAATTAATTTTCTATTATATTGTTTCTTGCTATTTGTTCAATGATTACTCAATGATATGGTCAGCATTGTTTATTTATTTATTTTTTTTTCCTTTTGCAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGTTGAAAAAGAGTGCATCTTAGAAAGTGTGTTTCTTAAGCTTCAAATTTTGTTATGAGTTAAAGTTATTGGTTTTGGATTGTTCTCTCTCTTGTTTCTTTAGCCGTCAGGAGGTTGCTTTTGTTTTGAGGTCGATGGATTCTGGCATACAGTGTTGTGAGTTTTTTCTTTTTCTTAACTTTTTTCACAAGATGTCCACACTACTCCAATTAAGCATTAATCTGAATCTGTTGATTTTTCTCTGCTTAATTTTTTAATTTGATTTCTGTGCC

mRNA sequence

ATTATTTGGATCTACGTGGGAATAATAAACCCTAGTTTCGACTTTCGACATTGGCGCTCTCTACTCTTCTTTCTTCTCTCGCCCCTCGCTGAAACTCATCACACACCGACCATGCCGTTCAAGAGGTACGTCGAGATCGGAAGAGTCGCTCTCGTCAATTACGGCGAAGACTATGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCAGAACAGAGCTTTGGTGGATGCTCCTGATATGGTCAGATCTCAAATAAACTTCAAGAGACTTTCTCTCACTGACATTAAAATTGACATTAAGAGAGTCCCTAGGAAGAAGGAACTCATGGAAGCTATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGAAGAAAATTACTTGTGAAACAAAGAAGGGCATCACTTAATGATTTCGATAGGTTCAAGCTTATGCTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGTTGAAAAAGAGTGCATCTTAGAAAGTGTGTTTCTTAAGCTTCAAATTTTGTTATGAGTTAAAGTTATTGGTTTTGGATTGTTCTCTCTCTTGTTTCTTTAGCCGTCAGGAGGTTGCTTTTGTTTTGAGGTCGATGGATTCTGGCATACAGTGTTGTGAGTTTTTTCTTTTTCTTAACTTTTTTCACAAGATGTCCACACTACTCCAATTAAGCATTAATCTGAATCTGTTGATTTTTCTCTGCTTAATTTTTTAATTTGATTTCTGTGCC

Coding sequence (CDS)

ATGCCGTTCAAGAGGTACGTCGAGATCGGAAGAGTCGCTCTCGTCAATTACGGCGAAGACTATGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCAGAACAGAGCTTTGGTGGATGCTCCTGATATGGTCAGATCTCAAATAAACTTCAAGAGACTTTCTCTCACTGACATTAAAATTGACATTAAGAGAGTCCCTAGGAAGAAGGAACTCATGGAAGCTATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGAAGAAAATTACTTGTGAAACAAAGAAGGGCATCACTTAATGATTTCGATAGGTTCAAGCTTATGCTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCAAAGTTGAAAAAGAGTGCATCTTAG

Protein sequence

MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKIDIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKKSAS*

Homology

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BLAST of MELO3C006412 vs. Swiss-Prot
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.1e-55
Identity = 106/133 (79.70%), Postives = 122/133 (91.73%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDM RS INFKRLSLTD+KI
Sbjct: 1   MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KK+L++A++AADV+ KW  SSWGRKL+VK+ RA+LNDFDRFK+MLAKIKRA  
Sbjct: 61  DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120

Query: 121 VRQELAKLKKSAS 134
           VRQELAKLKK+A+
Sbjct: 121 VRQELAKLKKTAA 133

[Close]

BLAST of MELO3C006412 vs. Swiss-Prot
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.0e-55
Identity = 107/130 (82.31%), Postives = 119/130 (91.54%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R Q+NFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK L+EAM+ ADV+ KWE SSWGRKL+V++RRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELAKLKK 131
           VRQELAKLKK
Sbjct: 121 VRQELAKLKK 130

[Close]

BLAST of MELO3C006412 vs. Swiss-Prot
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.5e-54
Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R Q+N KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK L+EAM+ ADV+ KWE SSWGRKL+V++RRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELAKLKK 131
           VRQELAKLK+
Sbjct: 121 VRQELAKLKR 130

[Close]

BLAST of MELO3C006412 vs. Swiss-Prot
Match: RL14_GRIJA (60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-27
Identity = 67/132 (50.76%), Postives = 90/132 (68.18%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQINFKRLSLTDI 60
           M F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   + R  IN KR++LT I
Sbjct: 1   MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60

Query: 61  KI-DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKR 120
           K+ DI R     E+     AA V + +  S WG+KL  +++RA+L+DF RFK+M+A++K+
Sbjct: 61  KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120

Query: 121 AGLVRQELAKLK 130
           +  +  ELAKLK
Sbjct: 121 SKAINAELAKLK 132

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BLAST of MELO3C006412 vs. Swiss-Prot
Match: RL14_LUMRU (60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-27
Identity = 64/133 (48.12%), Postives = 85/133 (63.91%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQINFKRLSLTDI 60
           M F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  +NFK L LT++
Sbjct: 1   MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60

Query: 61  KIDIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRA 120
           K       +   + +A +  ++ KKWE+S   +K+  K++R +L DF+RFKLM AK  R 
Sbjct: 61  KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120

Query: 121 GLVRQELAKLKKS 132
            L++ E  KL+K+
Sbjct: 121 RLIKIEFGKLRKA 133

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BLAST of MELO3C006412 vs. TrEMBL
Match: A0A0A0L4D3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 7.9e-66
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]

BLAST of MELO3C006412 vs. TrEMBL
Match: A0A0A0L725_CUCSA (Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-62
Identity = 125/133 (93.98%), Postives = 131/133 (98.50%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKA DVQKKWEDSSWGRKLLVK+RRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQEL+KLKKS S
Sbjct: 121 VRQELSKLKKSQS 133

[Close]

BLAST of MELO3C006412 vs. TrEMBL
Match: A0A0A0LIH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.5e-61
Identity = 120/131 (91.60%), Postives = 129/131 (98.47%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDM RSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKEL+EAMKA DVQKKWE+SSWGRKL+VK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKS 132
           VRQELAKLKK+
Sbjct: 121 VRQELAKLKKA 131

[Close]

BLAST of MELO3C006412 vs. TrEMBL
Match: Q9SXL9_CUCSA (Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.5e-61
Identity = 120/131 (91.60%), Postives = 129/131 (98.47%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDM RSQ+NFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKEL+EAMKA DVQKKWE+SSWGRKL+VK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELAKLKKS 132
           VRQELAKLKK+
Sbjct: 126 VRQELAKLKKA 136

[Close]

BLAST of MELO3C006412 vs. TrEMBL
Match: M5XHS7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013229mg PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.5e-59
Identity = 117/133 (87.97%), Postives = 130/133 (97.74%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKEL+ AM+AADV+KKWE+SSWGRKL+V++RRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELLAAMEAADVKKKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VR ELAKLKK ++
Sbjct: 121 VRTELAKLKKESA 133

[Close]

BLAST of MELO3C006412 vs. TAIR10
Match: AT4G27090.1 (AT4G27090.1 Ribosomal protein L14)

HSP 1 Score: 215.3 bits (547), Expect = 2.3e-56
Identity = 107/130 (82.31%), Postives = 119/130 (91.54%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R Q+NFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK L+EAM+ ADV+ KWE SSWGRKL+V++RRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELAKLKK 131
           VRQELAKLKK
Sbjct: 121 VRQELAKLKK 130

[Close]

BLAST of MELO3C006412 vs. TAIR10
Match: AT2G20450.1 (AT2G20450.1 Ribosomal protein L14)

HSP 1 Score: 213.4 bits (542), Expect = 8.6e-56
Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R Q+N KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK L+EAM+ ADV+ KWE SSWGRKL+V++RRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELAKLKK 131
           VRQELAKLK+
Sbjct: 121 VRQELAKLKR 130

[Close]

BLAST of MELO3C006412 vs. NCBI nr
Match: gi|659076103|ref|XP_008438503.1| (PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo])

HSP 1 Score: 258.8 bits (660), Expect = 5.1e-66
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]

BLAST of MELO3C006412 vs. NCBI nr
Match: gi|449432536|ref|XP_004134055.1| (PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 1.1e-65
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]

BLAST of MELO3C006412 vs. NCBI nr
Match: gi|659076099|ref|XP_008438500.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-62
Identity = 125/133 (93.98%), Postives = 131/133 (98.50%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 68  MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 127

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKA DVQKKWEDSSWGRKLLVK+RRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 128 DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 187

Query: 121 VRQELAKLKKSAS 134
           VRQEL+KLKKS S
Sbjct: 188 VRQELSKLKKSQS 200

[Close]

BLAST of MELO3C006412 vs. NCBI nr
Match: gi|449432538|ref|XP_004134056.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-62
Identity = 125/133 (93.98%), Postives = 131/133 (98.50%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKA DVQKKWEDSSWGRKLLVK+RRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQEL+KLKKS S
Sbjct: 121 VRQELSKLKKSQS 133

[Close]

BLAST of MELO3C006412 vs. NCBI nr
Match: gi|5762251|dbj|BAA83469.1| (Csf-1 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 6.4e-61
Identity = 120/131 (91.60%), Postives = 129/131 (98.47%), Query Frame = 1


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDM RSQ+NFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKEL+EAMKA DVQKKWE+SSWGRKL+VK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELAKLKKS 132
           VRQELAKLKK+
Sbjct: 126 VRQELAKLKKA 136

The following BLAST results are available for this feature:

BLAST of MELO3C006412 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL14_PEA	3.1e-55	79.70	Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1	[more]
RL142_ARATH	4.0e-55	82.31	60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1	[more]
RL141_ARATH	1.5e-54	81.54	60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1	[more]
RL14_GRIJA	1.2e-27	50.76	60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1	[more]
RL14_LUMRU	2.7e-27	48.12	60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1	[more]

BLAST of MELO3C006412 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4D3_CUCSA	7.9e-66	99.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1	[more]
A0A0A0L725_CUCSA	1.1e-62	93.98	Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1	[more]
A0A0A0LIH9_CUCSA	4.5e-61	91.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1	[more]
Q9SXL9_CUCSA	4.5e-61	91.60	Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1	[more]
M5XHS7_PRUPE	2.5e-59	87.97	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013229mg PE=4 SV=1	[more]

BLAST of MELO3C006412 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27090.1	2.3e-56	82.31	Ribosomal protein L14	[more]
AT2G20450.1	8.6e-56	81.54	Ribosomal protein L14	[more]

BLAST of MELO3C006412 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076103\|ref\|XP_008438503.1\|	5.1e-66	100.00	PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo]	[more]
gi\|449432536\|ref\|XP_004134055.1\|	1.1e-65	99.25	PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus]	[more]
gi\|659076099\|ref\|XP_008438500.1\|	1.5e-62	93.98	PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo]	[more]
gi\|449432538\|ref\|XP_004134056.1\|	1.5e-62	93.98	PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus]	[more]
gi\|5762251\|dbj\|BAA83469.1\|	6.4e-61	91.60	Csf-1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002784	Ribosomal_L14e_dom
IPR008991	Translation_prot_SH3-like_sf
IPR014722	Rib_L2_dom2

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU54440	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006412T1	MELO3C006412T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54440	MU54440	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002784	Ribosomal protein L14e domain	PFAM	PF01929	Ribosomal_L14e	coord: 45..117 score: 4.3
IPR008991	Translation protein SH3-like domain	unknown	SSF50104	Translation proteins SH3-like domain	coord: 5..93 score: 1.8
IPR014722	Ribosomal protein L2 domain 2	GENE3D	G3DSA:2.30.30.30		coord: 4..85 score: 8.9
None	No IPR available	PANTHER	PTHR11127	60S RIBOSOMAL PROTEIN L14	coord: 2..130 score: 3.8
None	No IPR available	PANTHER	PTHR11127:SF3	SUBFAMILY NOT NAMED	coord: 2..130 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006412	Cucumber (Gy14) v1	cgymeB439
MELO3C006412	Cucumber (Gy14) v1	cgymeB625
MELO3C006412	Cucurbita maxima (Rimu)	cmameB242
MELO3C006412	Cucurbita maxima (Rimu)	cmameB344
MELO3C006412	Cucurbita maxima (Rimu)	cmameB482
MELO3C006412	Cucurbita maxima (Rimu)	cmameB580
MELO3C006412	Cucurbita maxima (Rimu)	cmameB763
MELO3C006412	Cucurbita maxima (Rimu)	cmameB850
MELO3C006412	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006412	Cucurbita moschata (Rifu)	cmomeB337
MELO3C006412	Cucurbita moschata (Rifu)	cmomeB474
MELO3C006412	Cucurbita moschata (Rifu)	cmomeB568
MELO3C006412	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006412	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006412	Wild cucumber (PI 183967)	cpimeB144
MELO3C006412	Wild cucumber (PI 183967)	cpimeB230
MELO3C006412	Wild cucumber (PI 183967)	cpimeB239
MELO3C006412	Cucumber (Chinese Long) v2	cumeB145
MELO3C006412	Cucumber (Chinese Long) v2	cumeB236
MELO3C006412	Cucumber (Chinese Long) v2	cumeB240
MELO3C006412	Watermelon (Charleston Gray)	mewcgB427
MELO3C006412	Watermelon (Charleston Gray)	mewcgB441
MELO3C006412	Watermelon (Charleston Gray)	mewcgB445
MELO3C006412	Watermelon (97103) v1	mewmB486
MELO3C006412	Watermelon (97103) v1	mewmB459
MELO3C006412	Watermelon (97103) v1	mewmB461
MELO3C006412	Cucurbita pepo (Zucchini)	cpemeB015
MELO3C006412	Cucurbita pepo (Zucchini)	cpemeB143
MELO3C006412	Cucurbita pepo (Zucchini)	cpemeB316
MELO3C006412	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006412	Cucurbita pepo (Zucchini)	cpemeB702
MELO3C006412	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006412	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006412	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C006412	Bottle gourd (USVL1VR-Ls)	lsimeB382
MELO3C006412	Cucumber (Gy14) v2	cgybmeB126
MELO3C006412	Cucumber (Gy14) v2	cgybmeB200
MELO3C006412	Silver-seed gourd	carmeB0236
MELO3C006412	Silver-seed gourd	carmeB0240
MELO3C006412	Silver-seed gourd	carmeB0749
MELO3C006412	Silver-seed gourd	carmeB0780
MELO3C006412	Silver-seed gourd	carmeB0941
MELO3C006412	Silver-seed gourd	carmeB1050
MELO3C006412	Cucumber (Chinese Long) v3	cucmeB147
MELO3C006412	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006412	Cucumber (Chinese Long) v3	cucmeB245
MELO3C006412	Watermelon (97103) v2	mewmbB434
MELO3C006412	Watermelon (97103) v2	mewmbB448
MELO3C006412	Watermelon (97103) v2	mewmbB451
MELO3C006412	Wax gourd	mewgoB514
MELO3C006412	Wax gourd	mewgoB534
MELO3C006412	Wax gourd	mewgoB552
MELO3C006412	Melon (DHL92) v3.5.1	memeB140
MELO3C006412	Melon (DHL92) v3.5.1	memeB147