LsiUNG000320 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsiUNG000320
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionTetraspanin family protein
Locationchr00 : 518972 .. 520887 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACTAAACAAGACAGTAATGGGAGCCATAAACTTCATAGCCATGGTTCTATCAGTCCCCATCATCGGCGCCGGAATCTGGCTCGCCACCGAACAAGACAACGCCTGCGTCCAAATCCTCCAATGGCCTCTCATCATTTTCGGTGTCATCGTCCTTCTCGTTGCGGTCGCCGGTTTCATCGGAGCCTTTTGTCGCATCACTTGGCTACTCCTTCTTTACCTTGTAGCGATGCTCATTCTCATTATCCTCCTTGCTTGCTTGGTGGGCTTCATTTACGTGGTTACTATTAGAGGGAATGGCCATTTGGAGCCTAATAGAAGTTACTTGGAATATCATCTTGATGACTTTTCTGGGTTTCTTAGGCATAGAGTTCAAAGCTCTTTTAAATGGGATTTGATTCGAAGTTGTTTGAGTTCTTCTTCTATGTGTGCTGAATTGAATCAAAGCTTTCGTTTGGCTCAGGATTTCTTTACTGCTCCCATTACTCCTCTTCAGGTATGTATATATATGTAGATGAGTCTTTTTGTTTTTTTACCTACTTTTCTAACCATGATTTCAAAATATAAGCTAGGTTTAGAAAACTAAAAAATAAAAATAAAAATACTTTTTGAAAACCGTACAAAAGAATTTGAGACAAAAACAAAAATAAATTTCAAAAAACAGAAACTAAAAACAAAATGGTTATCAAACGAGGTCAAAGTATTTGAGAGAAAAAAAAAGACATAAATTATGTTTAAAAAAAATACTTTTGTGTCTCATTGTTACTTTTCATAGACGTAACAATTTAATTTTTATGAAATTGATAGCTAACAAATTATATAATCTCGGACGTGAAAAATATTAATAAAATCAAGTCATTACATAATAGAAAAAACAACACTTACTTTTTGACTGAGATTTTTCATAATAAAGATTAAATTAACAAGAACTGAAGTACTATACACTAAAGTTTATATACTAAAATTGTTACGAATGAACAAAAGTTTGCAAATTAAAACATAGAATATTCGTTCTAAAGATCAAAAATTGGAATCTCCACCGTACTTGTAGATACTTGTAAACGTAAACCAAATAAACCCTAATTTGGAAAAGTGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTGACACAGTCAGGATGCTGCAAGCCACCAACATTATGTGGATACACATTTGTGAACCCAACATATTGGATAATGCCTATAAACAATGCTGCTGACATGGATTGTTTGAAGTGGAACAATGACCAAACTCAGCTCTGTTATGGTTGTGATTCTTGCAAGGCTGGTTTGCTTGAGAGCTTGAAGAATCAATGGAGGAAGGCTGATATTATACTCCTCTTGTCTCTTATTGCTCTCATTTCTATCTATATGATTGCTTGTTGTGTCTTTAGAAATGCCAAAACTGAGAAACTCTTTGACAAATACAAGCAAGGACAACCTCAACCATATGTCTAA

mRNA sequence

ATGGCACTAAACAAGACAGTAATGGGAGCCATAAACTTCATAGCCATGGTTCTATCAGTCCCCATCATCGGCGCCGGAATCTGGCTCGCCACCGAACAAGACAACGCCTGCGTCCAAATCCTCCAATGGCCTCTCATCATTTTCGGTGTCATCGTCCTTCTCGTTGCGGTCGCCGGTTTCATCGGAGCCTTTTGTCGCATCACTTGGCTACTCCTTCTTTACCTTGTAGCGATGCTCATTCTCATTATCCTCCTTGCTTGCTTGGTGGGCTTCATTTACGTGGTTACTATTAGAGGGAATGGCCATTTGGAGCCTAATAGAAGTTACTTGGAATATCATCTTGATGACTTTTCTGGGTTTCTTAGGCATAGAGTTCAAAGCTCTTTTAAATGGGATTTGATTCGAAGATGCTGCAAGCCACCAACATTATGTGGATACACATTTGTGAACCCAACATATTGGATAATGCCTATAAACAATGCTGCTGACATGGATTGTTTGAAGTGGAACAATGACCAAACTCAGCTCTGTTATGGTTGTGATTCTTGCAAGGCTGGTTTGCTTGAGAGCTTGAAGAATCAATGGAGGAAGGCTGATATTATACTCCTCTTGTCTCTTATTGCTCTCATTTCTATCTATATGATTGCTTGTTGTGTCTTTAGAAATGCCAAAACTGAGAAACTCTTTGACAAATACAAGCAAGGACAACCTCAACCATATGTCTAA

Coding sequence (CDS)

ATGGCACTAAACAAGACAGTAATGGGAGCCATAAACTTCATAGCCATGGTTCTATCAGTCCCCATCATCGGCGCCGGAATCTGGCTCGCCACCGAACAAGACAACGCCTGCGTCCAAATCCTCCAATGGCCTCTCATCATTTTCGGTGTCATCGTCCTTCTCGTTGCGGTCGCCGGTTTCATCGGAGCCTTTTGTCGCATCACTTGGCTACTCCTTCTTTACCTTGTAGCGATGCTCATTCTCATTATCCTCCTTGCTTGCTTGGTGGGCTTCATTTACGTGGTTACTATTAGAGGGAATGGCCATTTGGAGCCTAATAGAAGTTACTTGGAATATCATCTTGATGACTTTTCTGGGTTTCTTAGGCATAGAGTTCAAAGCTCTTTTAAATGGGATTTGATTCGAAGATGCTGCAAGCCACCAACATTATGTGGATACACATTTGTGAACCCAACATATTGGATAATGCCTATAAACAATGCTGCTGACATGGATTGTTTGAAGTGGAACAATGACCAAACTCAGCTCTGTTATGGTTGTGATTCTTGCAAGGCTGGTTTGCTTGAGAGCTTGAAGAATCAATGGAGGAAGGCTGATATTATACTCCTCTTGTCTCTTATTGCTCTCATTTCTATCTATATGATTGCTTGTTGTGTCTTTAGAAATGCCAAAACTGAGAAACTCTTTGACAAATACAAGCAAGGACAACCTCAACCATATGTCTAA

Protein sequence

MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGFIGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGFLRHRVQSSFKWDLIRRCCKPPTLCGYTFVNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIALISIYMIACCVFRNAKTEKLFDKYKQGQPQPYV
Homology
[Close]
BLAST of LsiUNG000320 vs. Swiss-Prot
Match: TRN2_ARATH (Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 8.8e-77
Identity = 151/275 (54.91%), Postives = 184/275 (66.91%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           M L+  V+G INFI ++LS+P+IGAGIWLA    N+CV++LQWP+II GV++LLV +AGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHL------ 120
           IG F RITWLL++YL+AMLILI+LL CLVGFIY+VTIRG+GH EP+R+YLEY L      
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 ----------------------------------DDFSGFLRHRVQSSFKWDLIRRCCKP 180
                                              DF       +QS         CCKP
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSG--------CCKP 180

Query: 181 PTLCGYTFVNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADI 236
           PT CG+TFVNPTYWI PI+ +ADMDCL W+NDQ  LCY CDSCKAGLL ++K  W KADI
Sbjct: 181 PTKCGFTFVNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADI 240

[Close]
BLAST of LsiUNG000320 vs. Swiss-Prot
Match: TET2_ARATH (Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.6e-60
Identity = 120/268 (44.78%), Postives = 165/268 (61.57%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MAL   +   +N +A++ S+PI  +GIWLA++ DN CV +L+WP+++ GV++L+V+  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           IGA+     LL +YL  M ILI LL  ++ F +VVT     +  P R Y EY L+ FS +
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRHRVQSSFKWDLIRR---------------------------------CCKPPTLCGYT 180
           L+  V  S  W  +R                                  CCKPPT CGY 
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLI 236
           FVNPT W+ P N AAD DC  W+NDQ+QLCY C+SCKAGLL +L+ +WRKA++IL+++++
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

[Close]
BLAST of LsiUNG000320 vs. Swiss-Prot
Match: TET3_ARATH (Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.8e-45
Identity = 103/262 (39.31%), Postives = 151/262 (57.63%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNA-CVQILQWPLIIFGVIVLLVAVAG 60
           M  +  ++G +NF+  +LS+PI+G GIWL++  ++  C++ LQWPLI+ G+ +++V++AG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FIGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSG 120
           F GA  R  +L+ LYLV ML++I  L   + F Y VT +G+G    NR YL+Y+L+D+SG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 FLRHRVQSSFKWDLI-----------------------------RR-------CCKPPTL 180
           +L+ RV     W  I                             RR       CCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYTFVNPTYWIMPINNAA-DMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIIL 225
           CG+++VN T W         + DC+ W+NDQ+ LCY C SCKAG+L SLK  WRK  +I 
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

[Close]
BLAST of LsiUNG000320 vs. Swiss-Prot
Match: TET4_ARATH (Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-44
Identity = 102/262 (38.93%), Postives = 145/262 (55.34%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNA-CVQILQWPLIIFGVIVLLVAVAG 60
           M     ++G INF   +LS+PI+G GIWL++  ++  C++ LQWPLII G+ ++++++AG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FIGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSG 120
             GA  +  +L+ LYL  M  +I  L     F YVVT +G+G    NR YL+Y+L+D+SG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 FLRHRVQSSFKWDLI------------------------------------RRCCKPPTL 180
           +L+ RV  +  W  I                                      CCKPPT 
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 181 CGYTFVNPTYWIMPINNAA-DMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIIL 225
           CGYT+VN T WI        + DC+ WNNDQ  LCY C SCKAG+L SLK  WRK  +I 
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

[Close]
BLAST of LsiUNG000320 vs. Swiss-Prot
Match: TET7_ARATH (Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.4e-44
Identity = 92/253 (36.36%), Postives = 138/253 (54.55%), Query Frame = 1 

Query: 4   NKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGFIGA 63
           +  ++G +NF   +LS+PI+ AGIWL       C + L  P+++ G+ ++ V++AG +GA
Sbjct: 5   SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64

Query: 64  FCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGFLRH 123
            CR++ LL LYL AM +LI+L  C   F + VT RG G +  +R Y EYH+ D+S +L+ 
Sbjct: 65  CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124

Query: 124 RVQSSFKWDLIRR----------------------------------CCKPPTLCGYTFV 183
           RV ++  W+ IR                                   CCKP   C +T+V
Sbjct: 125 RVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTYV 184

Query: 184 NPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIAL 223
           NPT W        + DC  W+N    LCY C++CKAGLL+++KN W+K   + ++ LI L
Sbjct: 185 NPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLIFL 244

[Close]
BLAST of LsiUNG000320 vs. TrEMBL
Match: A0A0A0LEA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901690 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 2.4e-121
Identity = 225/274 (82.12%), Postives = 236/274 (86.13%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MALNKTVMGAINFIAMV+S+PIIGAGIWLAT+QDNACVQILQWPLIIFGVIVLLVAVAGF
Sbjct: 1   MALNKTVMGAINFIAMVVSIPIIGAGIWLATQQDNACVQILQWPLIIFGVIVLLVAVAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           IGAFCRI WLL+ YLVAMLILI+LL CLVGFIY+VTIRG+GHLEPNRSYLEYHL+DFSGF
Sbjct: 61  IGAFCRINWLLIAYLVAMLILIVLLGCLVGFIYMVTIRGSGHLEPNRSYLEYHLEDFSGF 120

Query: 121 LRHRVQSSFKWDLIRRC--------------------------------CKPPTLCGYTF 180
           LRHRVQSSFKWDLIR C                                CKPPTLCGYTF
Sbjct: 121 LRHRVQSSFKWDLIRSCLSSSSMCAELNQSFRLAQDFFTAPISPLQSGCCKPPTLCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 240
           VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA
Sbjct: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 240

Query: 241 LISIYMIACCVFRNAKTEKLFDKYKQGQ-PQPYV 242
           LIS+YMIA CVFRNAKT+KLFDKYKQGQ PQPY+
Sbjct: 241 LISVYMIAACVFRNAKTQKLFDKYKQGQPPQPYI 274

[Close]
BLAST of LsiUNG000320 vs. TrEMBL
Match: A0A067JMH7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21160 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.4e-92
Identity = 173/267 (64.79%), Postives = 205/267 (76.78%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MAL+  V+GAINF+AM+LS+PIIGAGIWLA E DN+CV+ILQWP+II G+++L+VA+AGF
Sbjct: 1   MALSNNVIGAINFVAMLLSIPIIGAGIWLAMETDNSCVKILQWPVIILGILILVVAIAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           +G F RI WLL+ YL+AMLILIILLACLV FIY+VTIRG+GHLEPNR+YLEYHLDDFSG+
Sbjct: 61  VGGFWRIPWLLIFYLIAMLILIILLACLVVFIYMVTIRGSGHLEPNRAYLEYHLDDFSGW 120

Query: 121 LRHRVQ--------------------------------SSFKWDLIRRCCKPPTLCGYTF 180
           LR RVQ                                ++    L   CCKPPT CGY F
Sbjct: 121 LRRRVQSSYKWDRIRSCLSSTDNCAELNQRFRMAQDFFNAHITPLQSGCCKPPTQCGYNF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 236
           VNPTYWI PI +AADMDCL WNNDQTQLCYGCDSCKAGLL +LK +WR+ADIILL++L+A
Sbjct: 181 VNPTYWISPIYDAADMDCLNWNNDQTQLCYGCDSCKAGLLANLKKEWRRADIILLITLVA 240

[Close]
BLAST of LsiUNG000320 vs. TrEMBL
Match: M5WD88_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009969mg PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.6e-91
Identity = 170/267 (63.67%), Postives = 205/267 (76.78%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MAL+  V+GAINF+AM+LS+PIIGAGIWLATE DN+CV+ILQWP+II G++ L+V +AGF
Sbjct: 1   MALSNNVIGAINFVAMLLSIPIIGAGIWLATEPDNSCVKILQWPVIILGILFLVVGIAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           +GAF RI WLL+ YL+AML+LI+LLA LV FIY+VTIRG+GHLEP+RSYLEYHLDD+SG+
Sbjct: 61  VGAFWRIPWLLISYLIAMLVLIVLLAALVVFIYMVTIRGSGHLEPSRSYLEYHLDDYSGW 120

Query: 121 LRHR----------------------VQSSFKW----------DLIRRCCKPPTLCGYTF 180
           LR R                      +  S++            L   CCKPPT CGYTF
Sbjct: 121 LRRRVRSPWKWDRIRSCLSSTNMCGELNQSYRMAQDFFNAHITPLQSGCCKPPTQCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 236
           VNPTYWI PINNAADMDCL WNNDQTQLC+ CDSCKAGLL ++K +WR+ DIILL++L+A
Sbjct: 181 VNPTYWISPINNAADMDCLNWNNDQTQLCFNCDSCKAGLLANIKKEWRRTDIILLITLVA 240

[Close]
BLAST of LsiUNG000320 vs. TrEMBL
Match: A9P9Y4_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.2e-90
Identity = 168/267 (62.92%), Postives = 204/267 (76.40%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MAL+  V+GAINF+AM+LS+PIIGAGIWLA E DN+CV+ILQWP+II G+++L+VA+AGF
Sbjct: 1   MALSSNVIGAINFVAMLLSIPIIGAGIWLAMEPDNSCVKILQWPIIILGILILIVALAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           +G F RI WLL+ YL+AMLILIILLACLV FIY+VT+RG+GHLEP+R+YLEY LDDFSG+
Sbjct: 61  VGGFWRIPWLLISYLIAMLILIILLACLVVFIYMVTVRGSGHLEPSRAYLEYRLDDFSGW 120

Query: 121 LRH----------------------RVQSSFKW----------DLIRRCCKPPTLCGYTF 180
           LR                        +  S++            L   CCKPPT CGYTF
Sbjct: 121 LRRRVQSSYKWDRIRGCLSSTNMCAELNQSYRMAQDFFNAHISPLQSGCCKPPTQCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 236
           VNPTYWI PINNAADMDCL+WNNDQ QLCY CDSCKAGLL +LK +WR+ADIILL++L+A
Sbjct: 181 VNPTYWISPINNAADMDCLQWNNDQNQLCYNCDSCKAGLLANLKEEWRRADIILLITLVA 240

[Close]
BLAST of LsiUNG000320 vs. TrEMBL
Match: B9MU32_POPTR (Senescence-associated family protein OS=Populus trichocarpa GN=POPTR_0001s02380g PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.8e-90
Identity = 168/267 (62.92%), Postives = 204/267 (76.40%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MAL+  V+GAINF+AM+LS+PIIGAGIWLA E DN+CV+ILQWP+II G+++L+VA+AGF
Sbjct: 1   MALSSNVIGAINFVAMLLSIPIIGAGIWLAMEPDNSCVKILQWPVIILGILILIVALAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           +G F RI WLL+ YL+AMLILIILLACLV FIY+VT+RG+GHLEP+R+YLEY LDDFSG+
Sbjct: 61  VGGFWRIPWLLISYLIAMLILIILLACLVVFIYMVTVRGSGHLEPSRAYLEYRLDDFSGW 120

Query: 121 LRH----------------------RVQSSFKW----------DLIRRCCKPPTLCGYTF 180
           LR                        +  S++            L   CCKPPT CGYTF
Sbjct: 121 LRRRVQSSYKWDRIRGCLSSTNMCAELNQSYRMAQDFFNAHISPLQSGCCKPPTQCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 236
           VNPTYWI PINNAADMDCL+WNNDQ QLCY CDSCKAGLL +LK +WR+ADIILL++L+A
Sbjct: 181 VNPTYWISPINNAADMDCLQWNNDQNQLCYNCDSCKAGLLANLKEEWRRADIILLITLVA 240

[Close]
BLAST of LsiUNG000320 vs. TAIR10
Match: AT5G46700.1 (AT5G46700.1 Tetraspanin family protein)

HSP 1 Score: 288.1 bits (736), Expect = 5.0e-78
Identity = 151/275 (54.91%), Postives = 184/275 (66.91%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           M L+  V+G INFI ++LS+P+IGAGIWLA    N+CV++LQWP+II GV++LLV +AGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHL------ 120
           IG F RITWLL++YL+AMLILI+LL CLVGFIY+VTIRG+GH EP+R+YLEY L      
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 ----------------------------------DDFSGFLRHRVQSSFKWDLIRRCCKP 180
                                              DF       +QS         CCKP
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSG--------CCKP 180

Query: 181 PTLCGYTFVNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADI 236
           PT CG+TFVNPTYWI PI+ +ADMDCL W+NDQ  LCY CDSCKAGLL ++K  W KADI
Sbjct: 181 PTKCGFTFVNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADI 240

[Close]
BLAST of LsiUNG000320 vs. TAIR10
Match: AT2G19580.1 (AT2G19580.1 tetraspanin2)

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-61
Identity = 120/268 (44.78%), Postives = 165/268 (61.57%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MAL   +   +N +A++ S+PI  +GIWLA++ DN CV +L+WP+++ GV++L+V+  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           IGA+     LL +YL  M ILI LL  ++ F +VVT     +  P R Y EY L+ FS +
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRHRVQSSFKWDLIRR---------------------------------CCKPPTLCGYT 180
           L+  V  S  W  +R                                  CCKPPT CGY 
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLI 236
           FVNPT W+ P N AAD DC  W+NDQ+QLCY C+SCKAGLL +L+ +WRKA++IL+++++
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

[Close]
BLAST of LsiUNG000320 vs. TAIR10
Match: AT3G45600.1 (AT3G45600.1 tetraspanin3)

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46
Identity = 103/262 (39.31%), Postives = 151/262 (57.63%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNA-CVQILQWPLIIFGVIVLLVAVAG 60
           M  +  ++G +NF+  +LS+PI+G GIWL++  ++  C++ LQWPLI+ G+ +++V++AG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FIGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSG 120
           F GA  R  +L+ LYLV ML++I  L   + F Y VT +G+G    NR YL+Y+L+D+SG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 FLRHRVQSSFKWDLI-----------------------------RR-------CCKPPTL 180
           +L+ RV     W  I                             RR       CCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYTFVNPTYWIMPINNAA-DMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIIL 225
           CG+++VN T W         + DC+ W+NDQ+ LCY C SCKAG+L SLK  WRK  +I 
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

[Close]
BLAST of LsiUNG000320 vs. TAIR10
Match: AT5G60220.1 (AT5G60220.1 tetraspanin4)

HSP 1 Score: 181.0 bits (458), Expect = 8.6e-46
Identity = 102/262 (38.93%), Postives = 145/262 (55.34%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNA-CVQILQWPLIIFGVIVLLVAVAG 60
           M     ++G INF   +LS+PI+G GIWL++  ++  C++ LQWPLII G+ ++++++AG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FIGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSG 120
             GA  +  +L+ LYL  M  +I  L     F YVVT +G+G    NR YL+Y+L+D+SG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 FLRHRVQSSFKWDLI------------------------------------RRCCKPPTL 180
           +L+ RV  +  W  I                                      CCKPPT 
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 181 CGYTFVNPTYWIMPINNAA-DMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIIL 225
           CGYT+VN T WI        + DC+ WNNDQ  LCY C SCKAG+L SLK  WRK  +I 
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

[Close]
BLAST of LsiUNG000320 vs. TAIR10
Match: AT4G28050.1 (AT4G28050.1 tetraspanin7)

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-45
Identity = 92/253 (36.36%), Postives = 138/253 (54.55%), Query Frame = 1 

Query: 4   NKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGFIGA 63
           +  ++G +NF   +LS+PI+ AGIWL       C + L  P+++ G+ ++ V++AG +GA
Sbjct: 5   SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64

Query: 64  FCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGFLRH 123
            CR++ LL LYL AM +LI+L  C   F + VT RG G +  +R Y EYH+ D+S +L+ 
Sbjct: 65  CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124

Query: 124 RVQSSFKWDLIRR----------------------------------CCKPPTLCGYTFV 183
           RV ++  W+ IR                                   CCKP   C +T+V
Sbjct: 125 RVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTYV 184

Query: 184 NPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIAL 223
           NPT W        + DC  W+N    LCY C++CKAGLL+++KN W+K   + ++ LI L
Sbjct: 185 NPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLIFL 244

[Close]
BLAST of LsiUNG000320 vs. NCBI nr
Match: gi|449437228|ref|XP_004136394.1| (PREDICTED: protein TORNADO 2 [Cucumis sativus])

HSP 1 Score: 443.0 bits (1138), Expect = 3.4e-121
Identity = 225/274 (82.12%), Postives = 236/274 (86.13%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MALNKTVMGAINFIAMV+S+PIIGAGIWLAT+QDNACVQILQWPLIIFGVIVLLVAVAGF
Sbjct: 1   MALNKTVMGAINFIAMVVSIPIIGAGIWLATQQDNACVQILQWPLIIFGVIVLLVAVAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           IGAFCRI WLL+ YLVAMLILI+LL CLVGFIY+VTIRG+GHLEPNRSYLEYHL+DFSGF
Sbjct: 61  IGAFCRINWLLIAYLVAMLILIVLLGCLVGFIYMVTIRGSGHLEPNRSYLEYHLEDFSGF 120

Query: 121 LRHRVQSSFKWDLIRRC--------------------------------CKPPTLCGYTF 180
           LRHRVQSSFKWDLIR C                                CKPPTLCGYTF
Sbjct: 121 LRHRVQSSFKWDLIRSCLSSSSMCAELNQSFRLAQDFFTAPISPLQSGCCKPPTLCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 240
           VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA
Sbjct: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 240

Query: 241 LISIYMIACCVFRNAKTEKLFDKYKQGQ-PQPYV 242
           LIS+YMIA CVFRNAKT+KLFDKYKQGQ PQPY+
Sbjct: 241 LISVYMIAACVFRNAKTQKLFDKYKQGQPPQPYI 274

[Close]
BLAST of LsiUNG000320 vs. NCBI nr
Match: gi|659132038|ref|XP_008465983.1| (PREDICTED: protein TORNADO 2 [Cucumis melo])

HSP 1 Score: 437.2 bits (1123), Expect = 1.9e-119
Identity = 221/274 (80.66%), Postives = 235/274 (85.77%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MALNKTVMGAINFIAMV+S+PIIGAGIWLAT+QDNACVQILQWPLIIFGV+VLLVAVAGF
Sbjct: 1   MALNKTVMGAINFIAMVVSIPIIGAGIWLATQQDNACVQILQWPLIIFGVVVLLVAVAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           IGAF RI WLL+ YLVAMLILI+LL CLVGFIY+VTIRG+GHLEPNRSYLEYHL+DFSGF
Sbjct: 61  IGAFLRINWLLIAYLVAMLILIVLLGCLVGFIYMVTIRGSGHLEPNRSYLEYHLEDFSGF 120

Query: 121 LRHRVQSSFKWDLIRRC--------------------------------CKPPTLCGYTF 180
           LRHRVQSSFKWDLIR C                                CKPPTLCGYTF
Sbjct: 121 LRHRVQSSFKWDLIRSCLSSSSMCAELNQSFRLAQDFFTAPISPLQSGCCKPPTLCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 240
           VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA
Sbjct: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 240

Query: 241 LISIYMIACCVFRNAKTEKLFDKYKQGQ-PQPYV 242
           L+S+Y+IA CVFRNAKT+KLFDKYKQGQ PQPY+
Sbjct: 241 LVSVYLIAACVFRNAKTQKLFDKYKQGQPPQPYI 274

[Close]
BLAST of LsiUNG000320 vs. NCBI nr
Match: gi|802778930|ref|XP_012091275.1| (PREDICTED: protein TORNADO 2 [Jatropha curcas])

HSP 1 Score: 347.4 bits (890), Expect = 2.0e-92
Identity = 173/267 (64.79%), Postives = 205/267 (76.78%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MAL+  V+GAINF+AM+LS+PIIGAGIWLA E DN+CV+ILQWP+II G+++L+VA+AGF
Sbjct: 1   MALSNNVIGAINFVAMLLSIPIIGAGIWLAMETDNSCVKILQWPVIILGILILVVAIAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           +G F RI WLL+ YL+AMLILIILLACLV FIY+VTIRG+GHLEPNR+YLEYHLDDFSG+
Sbjct: 61  VGGFWRIPWLLIFYLIAMLILIILLACLVVFIYMVTIRGSGHLEPNRAYLEYHLDDFSGW 120

Query: 121 LRHRVQ--------------------------------SSFKWDLIRRCCKPPTLCGYTF 180
           LR RVQ                                ++    L   CCKPPT CGY F
Sbjct: 121 LRRRVQSSYKWDRIRSCLSSTDNCAELNQRFRMAQDFFNAHITPLQSGCCKPPTQCGYNF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 236
           VNPTYWI PI +AADMDCL WNNDQTQLCYGCDSCKAGLL +LK +WR+ADIILL++L+A
Sbjct: 181 VNPTYWISPIYDAADMDCLNWNNDQTQLCYGCDSCKAGLLANLKKEWRRADIILLITLVA 240

[Close]
BLAST of LsiUNG000320 vs. NCBI nr
Match: gi|743809679|ref|XP_011018553.1| (PREDICTED: protein TORNADO 2-like [Populus euphratica])

HSP 1 Score: 343.2 bits (879), Expect = 3.7e-91
Identity = 171/267 (64.04%), Postives = 205/267 (76.78%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MAL+  V+GAINF+AM+LS+PIIGAGIWLA E DN+CV+ILQWP+II G+++L+VA+AGF
Sbjct: 1   MALSSNVIGAINFVAMLLSIPIIGAGIWLAMEPDNSCVKILQWPVIILGILILIVALAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           +GAF RI WLL+ YL+AMLILIILLACLV FIY+VT RG+GHLEP+R+YLEYHLDDFSG+
Sbjct: 61  VGAFWRIPWLLISYLIAMLILIILLACLVVFIYMVTARGSGHLEPSRAYLEYHLDDFSGW 120

Query: 121 LRH----------------------RVQSSFKW----------DLIRRCCKPPTLCGYTF 180
           LR                        +  S++            L   CCKPPT CGYTF
Sbjct: 121 LRRRVQSSYKWDRIRGCLSSTNMCAELNQSYRMAQDFFNAHISPLQSGCCKPPTQCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 236
           VNPTYWI PINNAADMDCL+WNNDQ QLCY CDSCKAGLL +LK +WR+ADIILL++L+A
Sbjct: 181 VNPTYWISPINNAADMDCLQWNNDQNQLCYNCDSCKAGLLANLKEEWRRADIILLITLVA 240

[Close]
BLAST of LsiUNG000320 vs. NCBI nr
Match: gi|595857353|ref|XP_007210528.1| (hypothetical protein PRUPE_ppa009969mg [Prunus persica])

HSP 1 Score: 343.2 bits (879), Expect = 3.7e-91
Identity = 170/267 (63.67%), Postives = 205/267 (76.78%), Query Frame = 1 

Query: 1   MALNKTVMGAINFIAMVLSVPIIGAGIWLATEQDNACVQILQWPLIIFGVIVLLVAVAGF 60
           MAL+  V+GAINF+AM+LS+PIIGAGIWLATE DN+CV+ILQWP+II G++ L+V +AGF
Sbjct: 1   MALSNNVIGAINFVAMLLSIPIIGAGIWLATEPDNSCVKILQWPVIILGILFLVVGIAGF 60

Query: 61  IGAFCRITWLLLLYLVAMLILIILLACLVGFIYVVTIRGNGHLEPNRSYLEYHLDDFSGF 120
           +GAF RI WLL+ YL+AML+LI+LLA LV FIY+VTIRG+GHLEP+RSYLEYHLDD+SG+
Sbjct: 61  VGAFWRIPWLLISYLIAMLVLIVLLAALVVFIYMVTIRGSGHLEPSRSYLEYHLDDYSGW 120

Query: 121 LRHR----------------------VQSSFKW----------DLIRRCCKPPTLCGYTF 180
           LR R                      +  S++            L   CCKPPT CGYTF
Sbjct: 121 LRRRVRSPWKWDRIRSCLSSTNMCGELNQSYRMAQDFFNAHITPLQSGCCKPPTQCGYTF 180

Query: 181 VNPTYWIMPINNAADMDCLKWNNDQTQLCYGCDSCKAGLLESLKNQWRKADIILLLSLIA 236
           VNPTYWI PINNAADMDCL WNNDQTQLC+ CDSCKAGLL ++K +WR+ DIILL++L+A
Sbjct: 181 VNPTYWISPINNAADMDCLNWNNDQTQLCFNCDSCKAGLLANIKKEWRRTDIILLITLVA 240

The following BLAST results are available for this feature:
BLAST of LsiUNG000320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRN2_ARATH8.8e-7754.91Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1[more]
TET2_ARATH2.6e-6044.78Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1[more]
TET3_ARATH1.8e-4539.31Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1[more]
TET4_ARATH1.5e-4438.93Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1[more]
TET7_ARATH4.4e-4436.36Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1[more]
BLAST of LsiUNG000320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEA8_CUCSA2.4e-12182.12Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901690 PE=4 SV=1[more]
A0A067JMH7_JATCU1.4e-9264.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21160 PE=3 SV=1[more]
M5WD88_PRUPE2.6e-9163.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009969mg PE=3 SV=1[more]
A9P9Y4_POPTR2.2e-9062.92Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
B9MU32_POPTR2.8e-9062.92Senescence-associated family protein OS=Populus trichocarpa GN=POPTR_0001s02380g... [more]
BLAST of LsiUNG000320 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G46700.15.0e-7854.91 Tetraspanin family protein[more]
AT2G19580.11.5e-6144.78 tetraspanin2[more]
AT3G45600.11.0e-4639.31 tetraspanin3[more]
AT5G60220.18.6e-4638.93 tetraspanin4[more]
AT4G28050.12.5e-4536.36 tetraspanin7[more]
BLAST of LsiUNG000320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437228|ref|XP_004136394.1|3.4e-12182.12PREDICTED: protein TORNADO 2 [Cucumis sativus][more]
gi|659132038|ref|XP_008465983.1|1.9e-11980.66PREDICTED: protein TORNADO 2 [Cucumis melo][more]
gi|802778930|ref|XP_012091275.1|2.0e-9264.79PREDICTED: protein TORNADO 2 [Jatropha curcas][more]
gi|743809679|ref|XP_011018553.1|3.7e-9164.04PREDICTED: protein TORNADO 2-like [Populus euphratica][more]
gi|595857353|ref|XP_007210528.1|3.7e-9163.67hypothetical protein PRUPE_ppa009969mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR018499Tetraspanin/Peripherin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0010015 root morphogenesis
biological_process GO:0009934 regulation of meristem structural organization
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0008361 regulation of cell size
biological_process GO:0009956 radial pattern formation
biological_process GO:0010014 meristem initiation
biological_process GO:0009554 megasporogenesis
biological_process GO:0010305 leaf vascular tissue pattern formation
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009926 auxin polar transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
LsiUNG000320.1LsiUNG000320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 5..218
score: 5.1
NoneNo IPR availablePANTHERPTHR32191FAMILY NOT NAMEDcoord: 1..238
score: 2.4E
NoneNo IPR availablePANTHERPTHR32191:SF14PROTEIN TORNADO 2coord: 1..238
score: 2.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
LsiUNG000320Csa3G009500Cucumber (Chinese Long) v2culsiB148
LsiUNG000320Csa3G901690Cucumber (Chinese Long) v2culsiB147
LsiUNG000320CSPI03G01520Wild cucumber (PI 183967)cpilsiB147
LsiUNG000320CSPI03G46610Wild cucumber (PI 183967)cpilsiB146
LsiUNG000320Cucsa.313030Cucumber (Gy14) v1cgylsiB500
LsiUNG000320Cucsa.321910Cucumber (Gy14) v1cgylsiB525
LsiUNG000320CmaCh02G016160Cucurbita maxima (Rimu)cmalsiB529
LsiUNG000320CmaCh16G011700Cucurbita maxima (Rimu)cmalsiB297
LsiUNG000320CmoCh02G016610Cucurbita moschata (Rifu)cmolsiB514
LsiUNG000320CmoCh16G012200Cucurbita moschata (Rifu)cmolsiB285
LsiUNG000320Cla008818Watermelon (97103) v1lsiwmB002
LsiUNG000320MELO3C003419Melon (DHL92) v3.5.1lsimeB002
LsiUNG000320MELO3C013844Melon (DHL92) v3.5.1lsimeB004
LsiUNG000320ClCG10G001500Watermelon (Charleston Gray)lsiwcgB001
LsiUNG000320MELO3C003419.2Melon (DHL92) v3.6.1lsimedB002
LsiUNG000320MELO3C013844.2Melon (DHL92) v3.6.1lsimedB004
LsiUNG000320Cla97C09G174500Watermelon (97103) v2lsiwmbB006
LsiUNG000320Cla97C10G186110Watermelon (97103) v2lsiwmbB002
LsiUNG000320Bhi05G000318Wax gourdlsiwgoB002
LsiUNG000320Cp4.1LG14g09700Cucurbita pepo (Zucchini)cpelsiB162
LsiUNG000320CsGy3G001420Cucumber (Gy14) v2cgyblsiB134
LsiUNG000320CsGy3G044060Cucumber (Gy14) v2cgyblsiB133
LsiUNG000320Carg08843Silver-seed gourdcarlsiB712
LsiUNG000320Carg26203Silver-seed gourdcarlsiB450
LsiUNG000320CsaV3_3G001580Cucumber (Chinese Long) v3cuclsiB161
LsiUNG000320CsaV3_3G049070Cucumber (Chinese Long) v3cuclsiB160
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
LsiUNG000320Lsi07G011840Bottle gourd (USVL1VR-Ls)lsilsiB000
The following block(s) are covering this gene:
GeneOrganismBlock
LsiUNG000320Silver-seed gourdcarlsiB880
LsiUNG000320Silver-seed gourdcarlsiB887
LsiUNG000320Watermelon (97103) v2lsiwmbB005
LsiUNG000320Cucurbita maxima (Rimu)cmalsiB462
LsiUNG000320Cucurbita maxima (Rimu)cmalsiB740
LsiUNG000320Cucurbita moschata (Rifu)cmolsiB447
LsiUNG000320Cucurbita moschata (Rifu)cmolsiB732
LsiUNG000320Cucurbita pepo (Zucchini)cpelsiB190
LsiUNG000320Cucurbita pepo (Zucchini)cpelsiB576
LsiUNG000320Cucurbita pepo (Zucchini)cpelsiB695
LsiUNG000320Watermelon (Charleston Gray)lsiwcgB000
LsiUNG000320Watermelon (97103) v1lsiwmB001