LsiUNG000160 (gene) Bottle gourd (USVL1VR-Ls)

NameLsiUNG000160
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr00 : 267410 .. 269140 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTGGGATCGGGATGGTAATTAATGTGTTTATTGAATGGGTAATCATATGGGTTATTGTTTAGAAACTATTTGATTTTTATTCTTTGGTTTTTGAAAATTAAGAATATTTCCTATCTATTTTTTACTATAGTTTTCATCTTTATTAGGTAAAAGAGTTGAATTTTTAGTCCAATTTTAAAAATAAAAATATGTTTTCAAAAACCTTTTTTTTTAGTTTTTAAAATTTAGCTTGGTTTTTGAAAATATTGATGAAAAATATATGACAAAGTCATAAATTTAGAGGTAAAATTGGTGTTTATAAGCTCATTTTTTCAAAAACTAAAAGCTAAAAACCAAAATTTTATCAAATGAGACCTTAGTTTTTGGTTTTTAAAAATTAAGTCTATAAGTACATTTTATACTTCTAAATTTCTTGTTTTATTATTTACTTTGTACCAACGTTTTCGAAAATCAAGCCAAGTTTTTTTTTAAAAAAAAAAAAGAAGTAGTTTTTACTTAAGAAAGATGAAAACAATTTAAGAAATTAAGAGAAAATAGACTTAATTTTCAAAAAGACCAAAATAAAAAAATTGAATGGTTACCAAACGAGACCTAAAATATTTATTATGTTTTTAGTAGTAATTACTAAGTTATATTTGAAATTAAACCTTAACTGTCATCTTGAGTATATCTCAACGGGTTTTTGCATATACCTTGAGGTCAAAATTTCGAATCCTCTAACACCATATGTAGTTTCTCTAATACCATATGTAGTTGAACTACTTTTCAGCTCAACCAACCACATTTGGCAACCAACTCCGTCGATCATCTCCAACAACTAATTCTGACGACCAGCTTGGCTGACCACATACTAAAAAAAACTCGGTGGGTGAACATGTTTTTAAATTTATTAGTTCATAGCGTGTTTAATAGCCTTCTTTATAGAAATTTGCTTATAATAAAATCACTTTAACAAACTTGTGTATAAAAATGTTTTTGAGAAAATGTAACTAAACAACATGAGTGTTTTTATTTTAAACGATTTTTTATAAAAAAAAATGTTAAAATGAAAAATGATTTGTTGAAAAACGTTTTTTACTAGGTAATCAAAACATTACCCAATTCAAGTTTTTTAGGTTAAAAAGAAGATTAAATGATTTATTAAACAAAAGACTTCGAGGTTGATAATATAAACACTATGCCAGTTTGAGATATGCTCGTTTTGGCCAAAATCTTTTATTTCTATTTGCAAAATATGATATTTAACATACCACTACTTGTTTAATATGAAAAAGAAATCCTCATAAACCTACACTTAATAACTTCAAGTTAAACAAATTAACACTATAAATACTTACTTTTTAAACTCAAACTAAAATATTCTACTCCCCAAATACAATCTTCAACTATTATAATAAACTTTGATAACTTTGAATATCAAACATTGCTTTAAAAAGATTACCAAACACAAATTACAAAAACTCAAATTCAGTGGCTAAATTTGTAATTTAACCATATTTGTTTTATAAAGTAAGGAACATCCTCCCGACTTCTGAGCATTTCCGGTTGAGGAAGTTCGCTTTTACTCCTCATCTTTCCCGCCGGAAACTCGACTTCCTCGCCGGAAAACGGCTTCAACCTCCGGAGGAGCTCTCATCTCTTCCGAATAATGCTCTTCTTTCTCATTTTCCCTACTCTTTTACCTCGGATTGGTCGGAGAATGGCTTTCGATCTTCAAGTAATTAG

mRNA sequence

ATGAGGAACATCCTCCCGACTTCTGAGCATTTCCGGTTGAGGAAGTTCGCTTTTACTCCTCATCTTTCCCGCCGGAAACTCGACTTCCTCGCCGGAAAACGGCTTCAACCTCCGGAGGAGCTCTCATCTCTTCCGAATAATGCTCTTCTTTCTCATTTTCCCTACTCTTTTACCTCGGATTGGTCGGAGAATGGCTTTCGATCTTCAAGTAATTAG

Coding sequence (CDS)

ATGAGGAACATCCTCCCGACTTCTGAGCATTTCCGGTTGAGGAAGTTCGCTTTTACTCCTCATCTTTCCCGCCGGAAACTCGACTTCCTCGCCGGAAAACGGCTTCAACCTCCGGAGGAGCTCTCATCTCTTCCGAATAATGCTCTTCTTTCTCATTTTCCCTACTCTTTTACCTCGGATTGGTCGGAGAATGGCTTTCGATCTTCAAGTAATTAG

Protein sequence

MRNILPTSEHFRLRKFAFTPHLSRRKLDFLAGKRLQPPEELSSLPNNALLSHFPYSFTSDWSENGFRSSSN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
LsiUNG000160.1LsiUNG000160.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
LsiUNG000160Cucumber (Gy14) v2cgyblsiB133
LsiUNG000160Cucumber (Gy14) v2cgyblsiB134
LsiUNG000160Melon (DHL92) v3.6.1lsimedB002
LsiUNG000160Melon (DHL92) v3.6.1lsimedB004
LsiUNG000160Silver-seed gourdcarlsiB069
LsiUNG000160Silver-seed gourdcarlsiB712
LsiUNG000160Silver-seed gourdcarlsiB880
LsiUNG000160Silver-seed gourdcarlsiB957
LsiUNG000160Cucumber (Chinese Long) v3cuclsiB160
LsiUNG000160Cucumber (Chinese Long) v3cuclsiB161
LsiUNG000160Watermelon (97103) v2lsiwmbB002
LsiUNG000160Watermelon (97103) v2lsiwmbB005
LsiUNG000160Wax gourdlsiwgoB002
LsiUNG000160Bottle gourd (USVL1VR-Ls)lsilsiB000
LsiUNG000160Cucumber (Gy14) v1cgylsiB500
LsiUNG000160Cucumber (Gy14) v1cgylsiB525
LsiUNG000160Cucurbita maxima (Rimu)cmalsiB297
LsiUNG000160Cucurbita maxima (Rimu)cmalsiB462
LsiUNG000160Cucurbita maxima (Rimu)cmalsiB529
LsiUNG000160Cucurbita maxima (Rimu)cmalsiB740
LsiUNG000160Cucurbita moschata (Rifu)cmolsiB285
LsiUNG000160Cucurbita moschata (Rifu)cmolsiB447
LsiUNG000160Cucurbita moschata (Rifu)cmolsiB514
LsiUNG000160Cucurbita moschata (Rifu)cmolsiB732
LsiUNG000160Cucurbita pepo (Zucchini)cpelsiB162
LsiUNG000160Cucurbita pepo (Zucchini)cpelsiB190
LsiUNG000160Cucurbita pepo (Zucchini)cpelsiB576
LsiUNG000160Cucurbita pepo (Zucchini)cpelsiB695
LsiUNG000160Wild cucumber (PI 183967)cpilsiB146
LsiUNG000160Wild cucumber (PI 183967)cpilsiB147
LsiUNG000160Cucumber (Chinese Long) v2culsiB148
LsiUNG000160Cucumber (Chinese Long) v2culsiB147
LsiUNG000160Melon (DHL92) v3.5.1lsimeB002
LsiUNG000160Melon (DHL92) v3.5.1lsimeB004
LsiUNG000160Watermelon (Charleston Gray)lsiwcgB000
LsiUNG000160Watermelon (Charleston Gray)lsiwcgB001
LsiUNG000160Watermelon (97103) v1lsiwmB001
LsiUNG000160Watermelon (97103) v1lsiwmB002