Lsi10G006600 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCGTTTACAAAACTTCAACAATCATTGTTATAAGAACATAAGAAGACTACTGAACTGATAAGCAGGCCTACAGGATAGGAAGAAATGAAGATTTCAAATTTGGGAAGATGCTTCTTCTTCGTCTTCTTCTTCTTCTACATCTTCATCTTGTTTGGAATTGCAGCAGCCCAAAGCAGTTCTCGAAAAATCCAATTGCCCGACGATGTTTTGTCGTCGGGAAAGCAATTCGGGTTTTTCATATTCGGAGATTCTTATGTGGATGTTGGAAACAACAACTACATCAACGCCACCAGTGATGGTCAAGCCAATTTTCTGCCCTATGGCGAAACCTTCTTCCCTATCCCAACCGGCCGTTTTTGTGATGGCCGTATTATACCTGATTTCTTAGGTCTGAATACTTCTCTTTTTCTTTTCTTTCAAATTTAGTTTCGAAAGCATAGGCTTTCCAACCCCAATTTAATTTTTTTTTTAAAAAAAAAACTCTCAAAACTTTATACCGCCCACCGAACTAGAGTTAGTATATCAAGTTTAAAGTGCATCAAATTGAGATGATTAAAAATCAAATGTATAGTCTTCTTAAACAGGACTTAGAGCCTCATCACTTTCTTGAACATTTTTAATTTGGTCGGAAAAACTACTCTTCTAAGATTTATTTGTTTATTTTTGGCAGCTGAATATGCAGAAATGCCTTTCAGTAAAGCATATTTAGACCCTAACAACAATAACTATATGAATGGTGTGAATTTTGGATCTGGTGGAGGTGGAGCCTTAGTTGAGACAAATCAACAATGGGTACCAATCAAATCAATCAAACTAATTTTTTTTTCTTTTTTTTTTCCTCTGCTGAATTTAATGCATAATTTGTTTGGTTTTTCCAGGTCGGTATAGGGCTTAAAACTCAAATGAAATTCTTCCAAGAAGTGGAGAAATCACTGAGAAAGAAGCTGGGGAATGAAAGTTCTCAAAGATTCCTCTCTAATTCTGTGTTTTTCTTCATGTTTGGAGGAAATGATTACCAAAATCCTTTCGACATTAGCTATGATATCTTCAAAACCATTGAAGCTCAAGAACAGTACGTCAATATGGTGATCGGAAATATAACGATAGCTCTCAAGGTAATCTCTTCCGTGTCAAAATATGTTGGTTTAAATTATACAAAATTATCTTTTAAGCTAAATTTTAAAAAATAGTTCTAAATGAATTTTTATAACTAAGTGAACTTAGAATTAAAATACTTCAACAAAAATTGTATGTGAGTAGTTAAGTTGTGAGTTAATACACGCTTGAGTTAAATACACAAAAAGAGAAAGAAAGTTCAGAATTTTGTGTCATAAATAATTTGAGTACTGTTGATGCAAAATTTGGGACAGGAGAAACGCACCTAACCCTCGCGTGACATCAATACAGTTGAATTTGTAATTTTAGGAAAAAGAGGACCTACAAAACAAAGAAAATGACTCGATGCCTAAGTCAATAAAAGAATTATAGAATGGGAAAGAACTCAAGAAATTTTTAATTTTCATATCAAGATCAAGATCTATGTCATCTTCCTAGATTTATGTCCAGTTCCAGATCTATATCAAGTTCAAGATCTATCTCAAGTTCCAGACACCTCATATGAAGTTAAATGATGTATTTATAGAGAGAATGAAATGAAGTTTACCTTTTTCTCTTAGAATTGGATGAGATGGGTCTTTCCTTATTCTATATAGGATTAGATCTGATTAGTTGGATAAATTATTTGCTGATACTTAGACTTACTTGAACCAAGTCCACATTATCTTATATTTATCTTCTCGTATCTTTTCTTAATTTGTTTTTGTCTATTTTGTTAGGTCTAAATTCATCCAGAATAAAGACAATAATAGAAGTGATAAGAACAAGAAAAGAAAAGAAAAAAATATGTGATGAACCCTCCAACCATCAAGTTAAATTATTTTGATTTTTGATATTAAATGTGATGTGATTGATGTGAAATAGGAAGTATACAATTATGGAGGAAGGAAATTTGGGATTATGGCATTGGCTCCCACAGGTTATCTGCCATATGCGAGAAGGAAAAGAAGTGAGCAATATTTCCAAAAGACTTCTTCATTAACAAAGATTCACAACAACATGCTTTTTATTGCCCTTCAAAAATTTGCCAAACAACTCAAAGGATTCAAATTTGCTTTTGTCGATACACACACTTTTCTCCTACAAAGAATACTAAACCCTACCAAATATGGTAACCAATTTCCTTTCCCTATTTCTTTTTACTTTTTTAAATCATTCCACCATAAACAATAAATTCTTAACCATTTAGATCTTATATTTTCAAATTTGTTACAAATTAATCATTCTACTTTAGTAGTAATTTCGTCAATGTGTGTCTCAATCATAAAAAATATCATCAAAGTTAAAAGATTTATTCTTTAAAAATTATAAACACGTTAACTTAATTTTTTTTTGAACGATTTAGAAAAAACACTTTAGTAAAATTAAAAATAGATCACAAGATTTGTTAATTAACTGTCAATTATGTGGAGACTGATTTTTTAAAAAACCCTTTTGCTCCCTGAACTTTAATGAAAGTAACGATTTACTCC GTCGTTTACAAAACTTCAACAATCATTGTTATAAGAACATAAGAAGACTACTGAACTGATAAGCAGGCCTACAGGATAGGAAGAAATGAAGATTTCAAATTTGGGAAGATGCTTCTTCTTCGTCTTCTTCTTCTTCTACATCTTCATCTTGTTTGGAATTGCAGCAGCCCAAAGCAGTTCTCGAAAAATCCAATTGCCCGACGATGTTTTGTCGTCGGGAAAGCAATTCGGGTTTTTCATATTCGGAGATTCTTATGTGGATGTTGGAAACAACAACTACATCAACGCCACCAGTGATGGTCAAGCCAATTTTCTGCCCTATGGCGAAACCTTCTTCCCTATCCCAACCGGCCGTTTTTGTGATGGCCGTATTATACCTGATTTCTTAGACCCTAACAACAATAACTATATGAATGGTGTGAATTTTGGATCTGGTGGAGGTGGAGCCTTAGTTGAGACAAATCAACAATGGGTCGGTATAGGGCTTAAAACTCAAATGAAATTCTTCCAAGAAGTGGAGAAATCACTGAGAAAGAAGCTGGGGAATGAAAGTTCTCAAAGATTCCTCTCTAATTCTGTGTTTTTCTTCATGTTTGGAGGAAATGATTACCAAAATCCTTTCGACATTAGCTATGATATCTTCAAAACCATTGAAGCTCAAGAACAGTACGTCAATATGGTGATCGGAAATATAACGATAGCTCTCAAGGTAATCTCTTCCGTGTCAAAATATGTTGGAAGTATACAATTATGGAGGAAGGAAATTTGGGATTATGGCATTGGCTCCCACAGGTTATCTGCCATATGCGAGAAGGAAAAGAAGTGAGCAATATTTCCAAAAGACTTCTTCATTAACAAAGATTCACAACAACATGCTTTTTATTGCCCTTCAAAAATTTGCCAAACAACTCAAAGGATTCAAATTTGCTTTTGTCGATACACACACTTTTCTCCTACAAAGAATACTAAACCCTACCAAATATGGTAACCAATTTCCTTTCCCTATTTCTTTTTACTTTTTTAAATCATTCCACCATAAACAATAAATTCTTAACCATTTAGATCTTATATTTTCAAATTTGTTACAAATTAATCATTCTACTTTAGTAGTAATTTCGTCAATGTGTGTCTCAATCATAAAAAATATCATCAAAGTTAAAAGATTTATTCTTTAAAAATTATAAACACGTTAACTTAATTTTTTTTTGAACGATTTAGAAAAAACACTTTAGTAAAATTAAAAATAGATCACAAGATTTGTTAATTAACTGTCAATTATGTGGAGACTGATTTTTTAAAAAACCCTTTTGCTCCCTGAACTTTAATGAAAGTAACGATTTACTCC ATGAAGATTTCAAATTTGGGAAGATGCTTCTTCTTCGTCTTCTTCTTCTTCTACATCTTCATCTTGTTTGGAATTGCAGCAGCCCAAAGCAGTTCTCGAAAAATCCAATTGCCCGACGATGTTTTGTCGTCGGGAAAGCAATTCGGGTTTTTCATATTCGGAGATTCTTATGTGGATGTTGGAAACAACAACTACATCAACGCCACCAGTGATGGTCAAGCCAATTTTCTGCCCTATGGCGAAACCTTCTTCCCTATCCCAACCGGCCGTTTTTGTGATGGCCGTATTATACCTGATTTCTTAGACCCTAACAACAATAACTATATGAATGGTGTGAATTTTGGATCTGGTGGAGGTGGAGCCTTAGTTGAGACAAATCAACAATGGGTCGGTATAGGGCTTAAAACTCAAATGAAATTCTTCCAAGAAGTGGAGAAATCACTGAGAAAGAAGCTGGGGAATGAAAGTTCTCAAAGATTCCTCTCTAATTCTGTGTTTTTCTTCATGTTTGGAGGAAATGATTACCAAAATCCTTTCGACATTAGCTATGATATCTTCAAAACCATTGAAGCTCAAGAACAGTACGTCAATATGGTGATCGGAAATATAACGATAGCTCTCAAGGTAATCTCTTCCGTGTCAAAATATGTTGGAAGTATACAATTATGGAGGAAGGAAATTTGGGATTATGGCATTGGCTCCCACAGGTTATCTGCCATATGCGAGAAGGAAAAGAAGTGA MKISNLGRCFFFVFFFFYIFILFGIAAAQSSSRKIQLPDDVLSSGKQFGFFIFGDSYVDVGNNNYINATSDGQANFLPYGETFFPIPTGRFCDGRIIPDFLDPNNNNYMNGVNFGSGGGGALVETNQQWVGIGLKTQMKFFQEVEKSLRKKLGNESSQRFLSNSVFFFMFGGNDYQNPFDISYDIFKTIEAQEQYVNMVIGNITIALKVISSVSKYVGSIQLWRKEIWDYGIGSHRLSAICEKEKK
BLAST of Lsi10G006600 vs. Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32 Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 1
BLAST of Lsi10G006600 vs. Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2) HSP 1 Score: 132.9 bits (333), Expect = 4.8e-30 Identity = 89/216 (41.20%), Postives = 121/216 (56.02%), Query Frame = 1
BLAST of Lsi10G006600 vs. Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 2.4e-29 Identity = 85/206 (41.26%), Postives = 113/206 (54.85%), Query Frame = 1
BLAST of Lsi10G006600 vs. Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 9.1e-29 Identity = 84/221 (38.01%), Postives = 116/221 (52.49%), Query Frame = 1
BLAST of Lsi10G006600 vs. Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2) HSP 1 Score: 109.8 bits (273), Expect = 4.4e-23 Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 1
BLAST of Lsi10G006600 vs. TrEMBL
Match: A0A0A0LJN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G296100 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 6.7e-63 Identity = 137/224 (61.16%), Postives = 163/224 (72.77%), Query Frame = 1
BLAST of Lsi10G006600 vs. TrEMBL
Match: A0A0A0LQ38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G296110 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59 Identity = 135/225 (60.00%), Postives = 157/225 (69.78%), Query Frame = 1
BLAST of Lsi10G006600 vs. TrEMBL
Match: A0A0A0KCD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G448130 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 5.9e-43 Identity = 113/223 (50.67%), Postives = 141/223 (63.23%), Query Frame = 1
BLAST of Lsi10G006600 vs. TrEMBL
Match: A0A0A0LMU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G296120 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 6.1e-40 Identity = 99/180 (55.00%), Postives = 121/180 (67.22%), Query Frame = 1
BLAST of Lsi10G006600 vs. TrEMBL
Match: D7TZL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00540 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 4.0e-39 Identity = 88/174 (50.57%), Postives = 118/174 (67.82%), Query Frame = 1
BLAST of Lsi10G006600 vs. TAIR10
Match: AT5G40990.1 (AT5G40990.1 GDSL lipase 1) HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33 Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 1
BLAST of Lsi10G006600 vs. TAIR10
Match: AT1G53920.1 (AT1G53920.1 GDSL-motif lipase 5) HSP 1 Score: 132.9 bits (333), Expect = 2.7e-31 Identity = 89/216 (41.20%), Postives = 121/216 (56.02%), Query Frame = 1
BLAST of Lsi10G006600 vs. TAIR10
Match: AT1G53990.1 (AT1G53990.1 GDSL-motif lipase 3) HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30 Identity = 85/206 (41.26%), Postives = 113/206 (54.85%), Query Frame = 1
BLAST of Lsi10G006600 vs. TAIR10
Match: AT1G53940.1 (AT1G53940.1 GDSL-motif lipase 2) HSP 1 Score: 128.6 bits (322), Expect = 5.1e-30 Identity = 84/221 (38.01%), Postives = 116/221 (52.49%), Query Frame = 1
BLAST of Lsi10G006600 vs. TAIR10
Match: AT3G14225.1 (AT3G14225.1 GDSL-motif lipase 4) HSP 1 Score: 109.8 bits (273), Expect = 2.5e-24 Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 1
BLAST of Lsi10G006600 vs. NCBI nr
Match: gi|449467207|ref|XP_004151316.1| (PREDICTED: GDSL esterase/lipase 1-like [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 9.7e-63 Identity = 137/224 (61.16%), Postives = 163/224 (72.77%), Query Frame = 1
BLAST of Lsi10G006600 vs. NCBI nr
Match: gi|659116208|ref|XP_008457963.1| (PREDICTED: uncharacterized protein LOC103497528 [Cucumis melo]) HSP 1 Score: 241.1 bits (614), Expect = 2.0e-60 Identity = 143/233 (61.37%), Postives = 160/233 (68.67%), Query Frame = 1
BLAST of Lsi10G006600 vs. NCBI nr
Match: gi|449461429|ref|XP_004148444.1| (PREDICTED: GDSL esterase/lipase 1 [Cucumis sativus]) HSP 1 Score: 238.0 bits (606), Expect = 1.7e-59 Identity = 135/225 (60.00%), Postives = 157/225 (69.78%), Query Frame = 1
BLAST of Lsi10G006600 vs. NCBI nr
Match: gi|659124609|ref|XP_008462253.1| (PREDICTED: GDSL esterase/lipase 5-like [Cucumis melo]) HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43 Identity = 111/223 (49.78%), Postives = 143/223 (64.13%), Query Frame = 1
BLAST of Lsi10G006600 vs. NCBI nr
Match: gi|449447944|ref|XP_004141726.1| (PREDICTED: GDSL esterase/lipase 1-like [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 8.5e-43 Identity = 113/223 (50.67%), Postives = 141/223 (63.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |