Lsi10G005690 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G005690
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	EF hand calcium-binding family protein
Location	chr10 : 8318934 .. 8322786 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGTTGCAATTTGATAAATTAGAAAATTTAGGATAAAAATTGATATAATTCCTTAGATGTAGTCTAGGGTATGGGTAAAAATGGATTTTCATTTTCTGAAAACAAAGTAATTTAGAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAGAGGAAAGAAGCCGGTCCAATGCGAACACTACCCGATTAAGTTAGACGTTTTCGATGGGGGCAGATTGTCTAACATTCAAAGCGTTCGACGTTTGTGTTAGGCATTCGAACTTTCTCTGGATTTCTTTATCGTGCTGCGGCATCGTCTACCATGGTGAGTTGTTCGAAATCCAGTCATAAACTTCTTTTCTATGTTTTCCTTTTGAAGAGTTTTTCAATTTGTTGTTCGATCTTTGTCCTAATTTTGCATTTGATTCGATCTCTGCGACCATGAGGTCATGTTTTGGGTTATTATAATCTTCGTAATATGTTGCATTTCAGCTAGATTAGGTCAATTGTGTGAGTTTTTGATACTTAGAACTTGGGTAGAAGCCTTTGATTTCTGTATGAAATGAGAATATGCAATAAATAGCTAGAAATTGGACTGCTTCTTTTGCCAACTTCTTTTTTTTTCAGGTGAAAATTGGGTTTTGATTATTATGACTTGTTTTCCTTTTGGTTGGAATTTGCAATCTTCTTTGTAGGCAAGCTTATACAGAGGTGCTTCTAGGAAGGAAAAACCTAAAGGACGTCATGGGTTAACTCCCCAAAAGAAGCAGGAGATTAAGGAGGCTTTTGAGTTATTTGACACTGATGGCTCTGGTGCGCAAATTATTTCTTGTTTTATGCTTGTTACTGGTTTTTTATGTGTTTGAATGGGGTACTCAGTTGTTAGTCTGTATTACTTTTGGTTAGGGACTATCGATGCCAAAGAGCTTAATGTTGCAATGAGGTATGAATATCTCATCATGGATATGAAAACGACAGCTAAAAGATTGTAAATTTAAACTTTTATAACTGATTTATTCTTGTGGCAGGGCTCTTGGTTTTGAGATGACCGACGAGGTAACTCTATGCCCCTAGGATGCATTATGCATTTACCATTTCGATGGACAATCATGTGACATTCTAGCATGCATGATACCATTAGATAAGTTTGTCAGAAAACATCAGTTTATTTATCTTGTGGTATCCACGTTGTTTCTTAACGTTTTAGGCTAATTTTTCATTGTTACAATGTGATCAACGTAGCAAATTCCTATTCTCCCATTATTGATTATGCAAATAGTGAGGCCGTAAGGGTGTGCTATCTCCTTCAGAGTGAATTGTCTGTTTATTGTGGAGCGAGAGCCTTGACTTTCTTATTTTCTACTCTGCACCTTCAAAAGGCAGATTTTTCTTTTATGCAGAAGGCTATTATTAGGAAATTATTTTGCTGGACTGAGTGATTGTAGCGAGTTTTAAGTTTCCCTTGCATGCTTTTTCAGAGTTCTGTTTGCCTTTTAGTTTAGGTATCCTTCACATAATGTCAGTAGTTAGAAGATAAGCTATACAAATCAACAATCAAATTACTTTGGATCCGACTTTAAGATTTTCGCATGTGATAATTATATTGCTGATTGACATAAGATTGATCTCTTGTCGCTCATTCCAGCAAATCAGACAAATGATTGCAGATGTGGACAAAGATGGAAGTGGTGCCATTGATTATGATGAATTTGAATACATGATGACAGCAAAAATTGGAGAGAGAGACACTAAGGAGGAGCTTATGAAAGCATTTCATATTATTGACCATGATAACAATGTAAGGTCTTGATCTTTAGTATTTTAGATGATGGGGATCCAGATGGCTATGTTTTCTAAAATAACTGACCGAGAAATTTATTTATTTTTTGTTTTAATACAAATGCTGTTACCAAGAACAAAAATAGTTGTATGAAATATATTTATGGAATTTATCAAGACTCAATTTCACATTTAAAGTTTTCTTACAGAACTTTGAAGAAGCTAATTTGCTAAACATTCTGTTATTATTGATTGAATTGGCGTTGCATATTCATATTCTTTTTCCTGAATTCAGGGGAAGATATCTGGCAATGACATCAAGCGCATAGCAAAGGAGCTGGGTGAGGTCTTCACTGACAAAGACATTCAAGAGATGATTGATGAGGCAGACCGAGATCGTGAGTCACCTTTACTCTATTTTTGAAGCAGGTTTTCTTTTGTGGGGTTACTTTCATGTTTTATCCTTTTCTTGTCTGCCCCATACAACTTTGTTTCTTCATGGTATATAGATGGTATGGGGGCAGGTTAGATAACGTAACTTGTATATGTATGTCACGAAAGGGCACACACCCCAACAAGCTATAAGAAACAACCCTTCTCACAAAATGGTGGATGGAGGAGGAACTCCCCGACCATATCTTAAGCATCCCCATGCGGAGCTAGCAAGAAGCCAAATGTCTGAAAGAGATGATTCCACATGGATCTCACAAACTCACATCTCCAAAGAATGTGATTCAAGTCTTCTCAGCCTTTTGACAAAAATTACAATAAAACAGACCAACTAACGAGAGCATCTTTCTCACAAGTCAATCCAGAGTGTTAGGTCTTCCATGTAAAACTTGCCAAGTAAAGAACTTACCTTAGAATCTTATTTCTCCAAAGAGCATAAAAAACCAACTCAAGTGAGGGAGAATGGTCTATCAAACTACGAAGAACGGAATTGCATGAGAATCTCTCCAAAGGGTTGGGACTCCACACACGAATGTCCCTTCTCCCATGTCTAAAAACAAACGCCTCATGCATGGAAAATAGAGAGACAACCTCCATCGCTTCCCTATTAGATGAAGAGCGACCTCTCAATGAATACTTAAATCCCAATTTCGAAGCCTCCAAGGAAACCGACCTCTCAATGACTTGTGATACTTCCAAGAGGGAGACTAAGGTAAGAAGAGGGAAAGAAACCAACTTCACATCCCACTATGTCCACCCGCCTCCTAAGCTTCTCATTACAATTGATCCCCATAACTTGACATTTACTCCCGTTAATCTTGAACTCAGGCATATGTGAGACCTATTCTTCATATGTATGAAAGGAGGGGCAGGAAAGGGAATTCACCGAAGGCAGTTGGTTAGTGGGACTCCCAAAAGTGGTAGGATACGGTTTGGTGATCTTGGAAGAGTTTGTGTAGGGTTTTGGGGGAAGGAGATCAATGTGATCACTTTGAGTGGAATTAGTCCTTGAGACTTTTAGGAGAGGCACCAAGACCTCTCGAATGAGCCGGATTATATCGTTTCCTTTCCTTGTTTGTCACTCATTTGAAGACTGACTTGTGTTGTGAGGATTCTCTTTGTGGTTTTTCTAAATACATTGCAACAGGGATCGTTATTCCCCTGGTCTGTTGTTCTCGCTGGAGTCTTCCTTGTTTGTCTTTCATTTGACATTTGTAAATATGTAGCTGGTTATATATGGAAGAAAAACAGTTAAATTGGATTTTGTAATTGCAGATGATGGTGAAGTGAACGTTGATGATTTCTTTAGAATGATGAGGAGGACGACATATGGATTCTAGAGGTCAAAGCAGAATGTGTATCATCCGCGCAAGGTATGACTATAGTAAGTACAGTTGTGAAAAAAAGAGACATACCAAAGTATTATGTTTAGAATGTTTGCTTAGTGTAACTCGTTTCTGTATGAGATAATATTATTTAAATTTCAGAGTTAATTTGAATATATTTGTTATTACTATTTTGAATTATGTGTAATGCTTGTGATTGACATAGTGCACCAATTTATTGAGAAAGCCATTGAAGTAAAGAGGGAGCTGGTAAATATGTACAAAAACCATTTTGAGAAGAGCACTGGAAGAGAGCGCGTGA

mRNA sequence

AAAAGGTTGCAATTTGATAAATTAGAAAATTTAGGATAAAAATTGATATAATTCCTTAGATGTAGTCTAGGGTATGGGTAAAAATGGATTTTCATTTTCTGAAAACAAAGTAATTTAGAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAGAGGAAAGAAGCCGGTCCAATGCGAACACTACCCGATTAAGTTAGACGTTTTCGATGGGGGCAGATTGTCTAACATTCAAAGCGTTCGACGTTTGTGTTAGGCATTCGAACTTTCTCTGGATTTCTTTATCGTGCTGCGGCATCGTCTACCATGGCAAGCTTATACAGAGGTGCTTCTAGGAAGGAAAAACCTAAAGGACGTCATGGGTTAACTCCCCAAAAGAAGCAGGAGATTAAGGAGGCTTTTGAGTTATTTGACACTGATGGCTCTGGGACTATCGATGCCAAAGAGCTTAATGTTGCAATGAGGGCTCTTGGTTTTGAGATGACCGACGAGCAAATCAGACAAATGATTGCAGATGTGGACAAAGATGGAAGTGGTGCCATTGATTATGATGAATTTGAATACATGATGACAGCAAAAATTGGAGAGAGAGACACTAAGGAGGAGCTTATGAAAGCATTTCATATTATTGACCATGATAACAATGGGAAGATATCTGGCAATGACATCAAGCGCATAGCAAAGGAGCTGGGTGAGGTCTTCACTGACAAAGACATTCAAGAGATGATTGATGAGGCAGACCGAGATCATGATGGTGAAGTGAACGTTGATGATTTCTTTAGAATGATGAGGAGGACGACATATGGATTCTAGAGGTCAAAGCAGAATGTGTATCATCCGCGCAAGGTATGACTATAGTAAGTACAGTTGTGAAAAAAAGAGACATACCAAAGTATTATGTTTAGAATGTTTGCTTAGTGTAACTCGTTTCTGTATGAGATAATATTATTTAAATTTCAGAGTTAATTTGAATATATTTGTTATTACTATTTTGAATTATGTGTAATGCTTGTGATTGACATAGTGCACCAATTTATTGAGAAAGCCATTGAAGTAAAGAGGGAGCTGGTAAATATGTACAAAAACCATTTTGAGAAGAGCACTGGAAGAGAGCGCGTGA

Coding sequence (CDS)

ATGGCAAGCTTATACAGAGGTGCTTCTAGGAAGGAAAAACCTAAAGGACGTCATGGGTTAACTCCCCAAAAGAAGCAGGAGATTAAGGAGGCTTTTGAGTTATTTGACACTGATGGCTCTGGGACTATCGATGCCAAAGAGCTTAATGTTGCAATGAGGGCTCTTGGTTTTGAGATGACCGACGAGCAAATCAGACAAATGATTGCAGATGTGGACAAAGATGGAAGTGGTGCCATTGATTATGATGAATTTGAATACATGATGACAGCAAAAATTGGAGAGAGAGACACTAAGGAGGAGCTTATGAAAGCATTTCATATTATTGACCATGATAACAATGGGAAGATATCTGGCAATGACATCAAGCGCATAGCAAAGGAGCTGGGTGAGGTCTTCACTGACAAAGACATTCAAGAGATGATTGATGAGGCAGACCGAGATCATGATGGTGAAGTGAACGTTGATGATTTCTTTAGAATGATGAGGAGGACGACATATGGATTCTAG

Protein sequence

MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF

Homology

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BLAST of Lsi10G005690 vs. Swiss-Prot
Match: CML20_ARATH (Probable calcium-binding protein CML20 OS=Arabidopsis thaliana GN=CML20 PE=1 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-70
Identity = 134/167 (80.24%), Postives = 150/167 (89.82%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           M+S+YR  SRKEKP+  HGLT QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MSSIYRTVSRKEKPRRHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQI +MIADVDKDGSGAID+DEF +MMTAKIGERDTKEEL KAF IID D NGKIS +D
Sbjct: 61  EEQINKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDD 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKR+AK+LGE FTD +I+EM++EADRD DGEVN+D+F RMMRRT YG
Sbjct: 121 IKRMAKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMMRRTAYG 167

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BLAST of Lsi10G005690 vs. Swiss-Prot
Match: CATR_ATRNU (Caltractin OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-68
Identity = 133/160 (83.12%), Postives = 147/160 (91.88%), Query Frame = 1


Query: 10  RKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQMI 69
           RK+KP+GRH GLT QK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT+EQI QMI
Sbjct: 8   RKDKPRGRHHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI 67

Query: 70  ADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAKEL 129
           ADVDKDGSGAID+DEF +MMTAKIGERDTKEELMKAF IID DNNGKIS  DI+RIAKEL
Sbjct: 68  ADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPEDIQRIAKEL 127

Query: 130 GEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           GE FT KDIQ+MI+EADRD DGEVNV++F RMM+RT+Y +
Sbjct: 128 GENFTVKDIQDMIEEADRDRDGEVNVEEFLRMMKRTSYAY 167

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BLAST of Lsi10G005690 vs. Swiss-Prot
Match: CML13_ORYSJ (Probable calcium-binding protein CML13 OS=Oryza sativa subsp. japonica GN=CML13 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-64
Identity = 125/168 (74.40%), Postives = 146/168 (86.90%), Query Frame = 1


Query: 3   SLYRGASRKEKPKGR--HGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 62
           S  +G +R+E+P+G   HGLT QK+QEIKEAF+LFDTD SGTIDAKELNVAMRALGFEMT
Sbjct: 2   STVKGQTRRERPRGARPHGLTKQKRQEIKEAFDLFDTDNSGTIDAKELNVAMRALGFEMT 61

Query: 63  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 122
           +EQI QMIADVDKDGSG+IDY+EFE+MMTAKIGERD+KEEL KAF IID D NGKIS  D
Sbjct: 62  EEQINQMIADVDKDGSGSIDYEEFEHMMTAKIGERDSKEELTKAFSIIDQDKNGKISDVD 121

Query: 123 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           I+RIAKELGE FT ++IQEM+ EADR+ DGE++ D+F RMMRRT YG+
Sbjct: 122 IQRIAKELGENFTYQEIQEMVQEADRNGDGEIDFDEFIRMMRRTGYGY 169

[Close]

BLAST of Lsi10G005690 vs. Swiss-Prot
Match: CML19_ARATH (Calcium-binding protein CML19 OS=Arabidopsis thaliana GN=CML19 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-56
Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 1


Query: 2   ASLYRGASRKEKPKGR-HGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 61
           A L RG     KPKG+ +GLT QK++EI+E F+LFD DGSG+IDA ELNVAMR+LGFEM 
Sbjct: 5   AQLRRGL----KPKGKTYGLTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMN 64

Query: 62  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 121
           ++QI +++A+VDK+ SGAID+DEF +MMT K GERD+ +EL KAF IIDHDNNGKIS  D
Sbjct: 65  NQQINELMAEVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRD 124

Query: 122 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IK IAKELGE FTD DI+EMI+EADRD DGEVN+++F +MM+RT+YG
Sbjct: 125 IKMIAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTSYG 167

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BLAST of Lsi10G005690 vs. Swiss-Prot
Match: CATR_SCHDU (Caltractin OS=Scherffelia dubia PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.3e-54
Identity = 105/159 (66.04%), Postives = 136/159 (85.53%), Query Frame = 1


Query: 8   ASRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQ 67
           ++R++K K R  GLT ++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE   E+I++
Sbjct: 8   SARRDKAKTRSAGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKK 67

Query: 68  MIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAK 127
           MIAD+DKDGSG ID++EF  MMTAK+GERD++EE+MKAF + D D  GKIS  ++KR+AK
Sbjct: 68  MIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAK 127

Query: 128 ELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTT 166
           ELGE  TD+++QEMIDEADRD DGEVN ++FFR+M++T+
Sbjct: 128 ELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIMKKTS 166

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BLAST of Lsi10G005690 vs. TrEMBL
Match: A0A0A0LPZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G286440 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.1e-83
Identity = 159/167 (95.21%), Postives = 162/167 (97.01%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRG SRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGVSRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQI+QMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEEL KAF IID+D NGKISGND
Sbjct: 61  EEQIKQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELTKAFDIIDYDKNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKRIAKELGEVFTDKDIQEMIDEADRD DGEVNVDDFFRMMRRTTYG
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDRDGEVNVDDFFRMMRRTTYG 167

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BLAST of Lsi10G005690 vs. TrEMBL
Match: A0A0D2US43_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G105500 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.8e-73
Identity = 141/169 (83.43%), Postives = 159/169 (94.08%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60
           MASLYRGASRK+K KGRH GL+ QK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM
Sbjct: 1   MASLYRGASRKDKQKGRHHGLSQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60

Query: 61  TDEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGN 120
           T+EQI QMIADVDKDGSGAID+DEF +MMTAKIGERDTKEELMKAF IID DNNGKIS +
Sbjct: 61  TEEQINQMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELMKAFQIIDQDNNGKISAD 120

Query: 121 DIKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           D+KRIAKELGE F++KDIQ+MI+EADRDHDGEV++++F RMM+RTTYG+
Sbjct: 121 DVKRIAKELGEHFSEKDIQDMIEEADRDHDGEVSIEEFMRMMKRTTYGY 169

[Close]

BLAST of Lsi10G005690 vs. TrEMBL
Match: A0A067K740_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12388 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.4e-73
Identity = 143/169 (84.62%), Postives = 154/169 (91.12%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60
           MA LYRG SRK+KP+GRH GL+ QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM
Sbjct: 1   MAPLYRGVSRKDKPRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60

Query: 61  TDEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGN 120
           T+EQI QMIADVDKDGSGAIDYDEFE+MMTAKIGERDTKEEL KAFHIID DNNG IS +
Sbjct: 61  TEEQINQMIADVDKDGSGAIDYDEFEHMMTAKIGERDTKEELTKAFHIIDQDNNGSISVD 120

Query: 121 DIKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           DIKRIAKELGE FTD++IQEM+ EADRD DGEV  DDF RMM+RTTYG+
Sbjct: 121 DIKRIAKELGENFTDREIQEMVGEADRDGDGEVGFDDFMRMMKRTTYGY 169

[Close]

BLAST of Lsi10G005690 vs. TrEMBL
Match: A0A061DGX6_THECC (Centrin2 isoform 1 OS=Theobroma cacao GN=TCM_000608 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-72
Identity = 140/169 (82.84%), Postives = 158/169 (93.49%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60
           MA+LYRGASRK+KP+GRH GL+ QK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM
Sbjct: 1   MATLYRGASRKDKPRGRHHGLSQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60

Query: 61  TDEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGN 120
           T+EQI QMIADVDKDGSGAID+DEF +MMTAKIGERDTKEELMKAF IID DNNGKIS  
Sbjct: 61  TEEQINQMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELMKAFQIIDQDNNGKISPQ 120

Query: 121 DIKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           DIK IAKELGE F++K+IQ+MI+EADRDHDGEV++D+F RMM+RTTYG+
Sbjct: 121 DIKHIAKELGEHFSEKEIQDMIEEADRDHDGEVSIDEFMRMMKRTTYGY 169

[Close]

BLAST of Lsi10G005690 vs. TrEMBL
Match: V4SJZ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026635mg PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 9.3e-72
Identity = 139/169 (82.25%), Postives = 155/169 (91.72%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60
           MASLY+G SRK+K +GRH GL+ QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM
Sbjct: 1   MASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60

Query: 61  TDEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGN 120
           T+EQI QMIADVDKDGSGAID DEFE+MMTAKIGERD+KEELMKAFHIID DNNGKIS  
Sbjct: 61  TEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAG 120

Query: 121 DIKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           DIKRIA+ELG  FTD++I EM++EADRDHDGEVN D+F RMM+RTT+G+
Sbjct: 121 DIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTTFGY 169

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BLAST of Lsi10G005690 vs. TAIR10
Match: AT3G50360.1 (AT3G50360.1 centrin2)

HSP 1 Score: 267.3 bits (682), Expect = 6.3e-72
Identity = 134/167 (80.24%), Postives = 150/167 (89.82%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           M+S+YR  SRKEKP+  HGLT QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MSSIYRTVSRKEKPRRHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQI +MIADVDKDGSGAID+DEF +MMTAKIGERDTKEEL KAF IID D NGKIS +D
Sbjct: 61  EEQINKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDD 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKR+AK+LGE FTD +I+EM++EADRD DGEVN+D+F RMMRRT YG
Sbjct: 121 IKRMAKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMMRRTAYG 167

[Close]

BLAST of Lsi10G005690 vs. TAIR10
Match: AT4G37010.2 (AT4G37010.2 centrin 2)

HSP 1 Score: 220.3 bits (560), Expect = 8.9e-58
Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 1


Query: 2   ASLYRGASRKEKPKGR-HGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 61
           A L RG     KPKG+ +GLT QK++EI+E F+LFD DGSG+IDA ELNVAMR+LGFEM 
Sbjct: 9   AQLRRGL----KPKGKTYGLTNQKRREIREIFDLFDIDGSGSIDASELNVAMRSLGFEMN 68

Query: 62  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 121
           ++QI +++A+VDK+ SGAID+DEF +MMT K GERD+ +EL KAF IIDHDNNGKIS  D
Sbjct: 69  NQQINELMAEVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRD 128

Query: 122 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IK IAKELGE FTD DI+EMI+EADRD DGEVN+++F +MM+RT+YG
Sbjct: 129 IKMIAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTSYG 171

[Close]

BLAST of Lsi10G005690 vs. TAIR10
Match: AT2G27030.3 (AT2G27030.3 calmodulin 5)

HSP 1 Score: 132.1 bits (331), Expect = 3.2e-31
Identity = 64/142 (45.07%), Postives = 93/142 (65.49%), Query Frame = 1


Query: 20  LTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQMIADVDKDGSGAI 79
           LT  +  E KEAF LFD DG G I  KEL   MR+LG   T+ +++ MI +VD DG+G I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 80  DYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAKELGEVFTDKDIQE 139
           D+ EF  +M  K+ + D++EEL +AF + D D NG IS  +++ +   LGE  TD+++ E
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124

Query: 140 MIDEADRDHDGEVNVDDFFRMM 162
           MI EAD D DG++N ++F ++M
Sbjct: 125 MIKEADVDGDGQINYEEFVKVM 146

[Close]

BLAST of Lsi10G005690 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3)

HSP 1 Score: 132.1 bits (331), Expect = 3.2e-31
Identity = 64/142 (45.07%), Postives = 93/142 (65.49%), Query Frame = 1


Query: 20  LTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQMIADVDKDGSGAI 79
           LT  +  E KEAF LFD DG G I  KEL   MR+LG   T+ +++ MI +VD DG+G I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 80  DYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAKELGEVFTDKDIQE 139
           D+ EF  +M  K+ + D++EEL +AF + D D NG IS  +++ +   LGE  TD+++ E
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124

Query: 140 MIDEADRDHDGEVNVDDFFRMM 162
           MI EAD D DG++N ++F ++M
Sbjct: 125 MIKEADVDGDGQINYEEFVKVM 146

[Close]

BLAST of Lsi10G005690 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7)

HSP 1 Score: 131.7 bits (330), Expect = 4.1e-31
Identity = 64/142 (45.07%), Postives = 93/142 (65.49%), Query Frame = 1


Query: 20  LTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTDEQIRQMIADVDKDGSGAI 79
           LT  +  E KEAF LFD DG G I  KEL   MR+LG   T+ +++ MI +VD DG+G I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 80  DYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGNDIKRIAKELGEVFTDKDIQE 139
           D+ EF  +M  K+ + D++EEL +AF + D D NG IS  +++ +   LGE  TD+++ E
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124

Query: 140 MIDEADRDHDGEVNVDDFFRMM 162
           MI EAD D DG++N ++F ++M
Sbjct: 125 MIREADVDGDGQINYEEFVKVM 146

[Close]

BLAST of Lsi10G005690 vs. NCBI nr
Match: gi|659115971|ref|XP_008457834.1| (PREDICTED: probable calcium-binding protein CML20 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 2.0e-83
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRG SRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGVSRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEEL KAF IID+D NGKISGND
Sbjct: 61  EEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELTKAFDIIDYDKNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKRIAKELGEVFTDKDIQEMIDEADRD DGEVNVDDFFRMMRRTTYG
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDRDGEVNVDDFFRMMRRTTYG 167

[Close]

BLAST of Lsi10G005690 vs. NCBI nr
Match: gi|449460604|ref|XP_004148035.1| (PREDICTED: probable calcium-binding protein CML20 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 4.4e-83
Identity = 159/167 (95.21%), Postives = 162/167 (97.01%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60
           MASLYRG SRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT
Sbjct: 1   MASLYRGVSRKEKPKGRHGLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMT 60

Query: 61  DEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGND 120
           +EQI+QMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEEL KAF IID+D NGKISGND
Sbjct: 61  EEQIKQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELTKAFDIIDYDKNGKISGND 120

Query: 121 IKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYG 168
           IKRIAKELGEVFTDKDIQEMIDEADRD DGEVNVDDFFRMMRRTTYG
Sbjct: 121 IKRIAKELGEVFTDKDIQEMIDEADRDRDGEVNVDDFFRMMRRTTYG 167

[Close]

BLAST of Lsi10G005690 vs. NCBI nr
Match: gi|823248405|ref|XP_012456869.1| (PREDICTED: caltractin isoform X2 [Gossypium raimondii])

HSP 1 Score: 282.3 bits (721), Expect = 5.4e-73
Identity = 141/169 (83.43%), Postives = 159/169 (94.08%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60
           MASLYRGASRK+K KGRH GL+ QK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM
Sbjct: 1   MASLYRGASRKDKQKGRHHGLSQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60

Query: 61  TDEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGN 120
           T+EQI QMIADVDKDGSGAID+DEF +MMTAKIGERDTKEELMKAF IID DNNGKIS +
Sbjct: 61  TEEQINQMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELMKAFQIIDQDNNGKISAD 120

Query: 121 DIKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           D+KRIAKELGE F++KDIQ+MI+EADRDHDGEV++++F RMM+RTTYG+
Sbjct: 121 DVKRIAKELGEHFSEKDIQDMIEEADRDHDGEVSIEEFMRMMKRTTYGY 169

[Close]

BLAST of Lsi10G005690 vs. NCBI nr
Match: gi|802642253|ref|XP_012079225.1| (PREDICTED: caltractin-like [Jatropha curcas])

HSP 1 Score: 281.6 bits (719), Expect = 9.2e-73
Identity = 143/169 (84.62%), Postives = 154/169 (91.12%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60
           MA LYRG SRK+KP+GRH GL+ QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM
Sbjct: 1   MAPLYRGVSRKDKPRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60

Query: 61  TDEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGN 120
           T+EQI QMIADVDKDGSGAIDYDEFE+MMTAKIGERDTKEEL KAFHIID DNNG IS +
Sbjct: 61  TEEQINQMIADVDKDGSGAIDYDEFEHMMTAKIGERDTKEELTKAFHIIDQDNNGSISVD 120

Query: 121 DIKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           DIKRIAKELGE FTD++IQEM+ EADRD DGEV  DDF RMM+RTTYG+
Sbjct: 121 DIKRIAKELGENFTDREIQEMVGEADRDGDGEVGFDDFMRMMKRTTYGY 169

[Close]

BLAST of Lsi10G005690 vs. NCBI nr
Match: gi|590704747|ref|XP_007047245.1| (Centrin2 isoform 1 [Theobroma cacao])

HSP 1 Score: 280.4 bits (716), Expect = 2.0e-72
Identity = 140/169 (82.84%), Postives = 158/169 (93.49%), Query Frame = 1


Query: 1   MASLYRGASRKEKPKGRH-GLTPQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60
           MA+LYRGASRK+KP+GRH GL+ QK+QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM
Sbjct: 1   MATLYRGASRKDKPRGRHHGLSQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60

Query: 61  TDEQIRQMIADVDKDGSGAIDYDEFEYMMTAKIGERDTKEELMKAFHIIDHDNNGKISGN 120
           T+EQI QMIADVDKDGSGAID+DEF +MMTAKIGERDTKEELMKAF IID DNNGKIS  
Sbjct: 61  TEEQINQMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELMKAFQIIDQDNNGKISPQ 120

Query: 121 DIKRIAKELGEVFTDKDIQEMIDEADRDHDGEVNVDDFFRMMRRTTYGF 169
           DIK IAKELGE F++K+IQ+MI+EADRDHDGEV++D+F RMM+RTTYG+
Sbjct: 121 DIKHIAKELGEHFSEKEIQDMIEEADRDHDGEVSIDEFMRMMKRTTYGY 169

The following BLAST results are available for this feature:

BLAST of Lsi10G005690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML20_ARATH	1.1e-70	80.24	Probable calcium-binding protein CML20 OS=Arabidopsis thaliana GN=CML20 PE=1 SV=...	[more]
CATR_ATRNU	1.1e-68	83.13	Caltractin OS=Atriplex nummularia PE=2 SV=1	[more]
CML13_ORYSJ	2.7e-64	74.40	Probable calcium-binding protein CML13 OS=Oryza sativa subsp. japonica GN=CML13 ...	[more]
CML19_ARATH	1.6e-56	67.07	Calcium-binding protein CML19 OS=Arabidopsis thaliana GN=CML19 PE=1 SV=1	[more]
CATR_SCHDU	4.3e-54	66.04	Caltractin OS=Scherffelia dubia PE=1 SV=1	[more]

BLAST of Lsi10G005690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPZ5_CUCSA	3.1e-83	95.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G286440 PE=4 SV=1	[more]
A0A0D2US43_GOSRA	3.8e-73	83.43	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G105500 PE=4 SV=1	[more]
A0A067K740_JATCU	6.4e-73	84.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12388 PE=4 SV=1	[more]
A0A061DGX6_THECC	1.4e-72	82.84	Centrin2 isoform 1 OS=Theobroma cacao GN=TCM_000608 PE=4 SV=1	[more]
V4SJZ0_9ROSI	9.3e-72	82.25	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026635mg PE=4 SV=1	[more]

BLAST of Lsi10G005690 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G50360.1	6.3e-72	80.24	centrin2	[more]
AT4G37010.2	8.9e-58	67.07	centrin 2	[more]
AT2G27030.3	3.2e-31	45.07	calmodulin 5	[more]
AT3G56800.1	3.2e-31	45.07	calmodulin 3	[more]
AT3G43810.1	4.1e-31	45.07	calmodulin 7	[more]

BLAST of Lsi10G005690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115971\|ref\|XP_008457834.1\|	2.0e-83	95.81	PREDICTED: probable calcium-binding protein CML20 [Cucumis melo]	[more]
gi\|449460604\|ref\|XP_004148035.1\|	4.4e-83	95.21	PREDICTED: probable calcium-binding protein CML20 [Cucumis sativus]	[more]
gi\|823248405\|ref\|XP_012456869.1\|	5.4e-73	83.43	PREDICTED: caltractin isoform X2 [Gossypium raimondii]	[more]
gi\|802642253\|ref\|XP_012079225.1\|	9.2e-73	84.62	PREDICTED: caltractin-like [Jatropha curcas]	[more]
gi\|590704747\|ref\|XP_007047245.1\|	2.0e-72	82.84	Centrin2 isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0030048	actin filament-based movement
biological_process	GO:0051645	Golgi localization
biological_process	GO:0051646	mitochondrion localization
biological_process	GO:0060151	peroxisome localization
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G005690.1	Lsi10G005690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 99..162 score: 1.4E-12coord: 26..88 score: 5.1
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 136..164 score: 2.7E-5coord: 27..55 score: 3.4E-8coord: 63..91 score: 5.7E-7coord: 100..128 score: 0
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 132..167 score: 12.812coord: 59..94 score: 14.653coord: 23..58 score: 16.857coord: 96..131 score: 12
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 13..163 score: 2.2
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 14..163 score: 1.11
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 145..157 score: -coord: 72..84 score: -coord: 36..48 score: -coord: 109..121 scor
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 5..166 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G005690	Csa2G286440	Cucumber (Chinese Long) v2	culsiB093
Lsi10G005690	CSPI02G14330	Wild cucumber (PI 183967)	cpilsiB091
Lsi10G005690	Cucsa.366810	Cucumber (Gy14) v1	cgylsiB594
Lsi10G005690	CmaCh20G011590	Cucurbita maxima (Rimu)	cmalsiB508
Lsi10G005690	CmaCh02G005560	Cucurbita maxima (Rimu)	cmalsiB546
Lsi10G005690	CmoCh02G005650	Cucurbita moschata (Rifu)	cmolsiB530
Lsi10G005690	CmoCh20G011860	Cucurbita moschata (Rifu)	cmolsiB495
Lsi10G005690	Cla020185	Watermelon (97103) v1	lsiwmB065
Lsi10G005690	MELO3C020899	Melon (DHL92) v3.5.1	lsimeB054
Lsi10G005690	ClCG02G012810	Watermelon (Charleston Gray)	lsiwcgB045
Lsi10G005690	MELO3C020899.2	Melon (DHL92) v3.6.1	lsimedB048
Lsi10G005690	Cla97C02G038490	Watermelon (97103) v2	lsiwmbB044
Lsi10G005690	Bhi10G001769	Wax gourd	lsiwgoB073
Lsi10G005690	Cp4.1LG05g11290	Cucurbita pepo (Zucchini)	cpelsiB604
Lsi10G005690	Cp4.1LG16g00610	Cucurbita pepo (Zucchini)	cpelsiB223
Lsi10G005690	CsGy2G014210	Cucumber (Gy14) v2	cgyblsiB086
Lsi10G005690	Carg27521	Silver-seed gourd	carlsiB168
Lsi10G005690	Carg11631	Silver-seed gourd	carlsiB963
Lsi10G005690	CsaV3_2G016880	Cucumber (Chinese Long) v3	cuclsiB104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G005690	Cucumber (Gy14) v2	cgyblsiB388
Lsi10G005690	Melon (DHL92) v3.6.1	lsimedB056
Lsi10G005690	Silver-seed gourd	carlsiB738
Lsi10G005690	Silver-seed gourd	carlsiB968
Lsi10G005690	Cucumber (Chinese Long) v3	cuclsiB446
Lsi10G005690	Watermelon (97103) v2	lsiwmbB038
Lsi10G005690	Wax gourd	lsiwgoB078
Lsi10G005690	Wax gourd	lsiwgoB082
Lsi10G005690	Bottle gourd (USVL1VR-Ls)	lsilsiB027
Lsi10G005690	Cucurbita maxima (Rimu)	cmalsiB553
Lsi10G005690	Cucurbita moschata (Rifu)	cmolsiB538
Lsi10G005690	Cucurbita pepo (Zucchini)	cpelsiB595
Lsi10G005690	Cucumber (Chinese Long) v2	culsiB420
Lsi10G005690	Melon (DHL92) v3.5.1	lsimeB046