Lsi09G014520 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi09G014520
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr09 : 22496824 .. 22497105 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCGAAGAGAGAGAGAAATTAAGGATACTCGAGCTGACCTGGCGATGATTGGGAGAGAAGGATTTAAACTAATTGACGAATTCTTCGGTCGAGCGCCGGCAACCAGAAAGGTGGCGGCAACGGAGAGGGCGCCTCAGCCGCAGCCTCCGCATAAGGCGGAGCAACCTCCGTGGAAGAAGAAAGAAAAACCGGCGGCGGCCGTGACTTCCGATCAGTTGGCCAAAATCCGAGGAGGGATCGTGATAACTACTTGGCGTGCGAATGCAAAACGAAAATAG

mRNA sequence

ATGGGTCGAAGAGAGAGAGAAATTAAGGATACTCGAGCTGACCTGGCGATGATTGGGAGAGAAGGATTTAAACTAATTGACGAATTCTTCGGTCGAGCGCCGGCAACCAGAAAGGTGGCGGCAACGGAGAGGGCGCCTCAGCCGCAGCCTCCGCATAAGGCGGAGCAACCTCCGTGGAAGAAGAAAGAAAAACCGGCGGCGGCCGTGACTTCCGATCAGTTGGCCAAAATCCGAGGAGGGATCGTGATAACTACTTGGCGTGCGAATGCAAAACGAAAATAG

Coding sequence (CDS)

ATGGGTCGAAGAGAGAGAGAAATTAAGGATACTCGAGCTGACCTGGCGATGATTGGGAGAGAAGGATTTAAACTAATTGACGAATTCTTCGGTCGAGCGCCGGCAACCAGAAAGGTGGCGGCAACGGAGAGGGCGCCTCAGCCGCAGCCTCCGCATAAGGCGGAGCAACCTCCGTGGAAGAAGAAAGAAAAACCGGCGGCGGCCGTGACTTCCGATCAGTTGGCCAAAATCCGAGGAGGGATCGTGATAACTACTTGGCGTGCGAATGCAAAACGAAAATAG

Protein sequence

MGRREREIKDTRADLAMIGREGFKLIDEFFGRAPATRKVAATERAPQPQPPHKAEQPPWKKKEKPAAAVTSDQLAKIRGGIVITTWRANAKRK
BLAST of Lsi09G014520 vs. TrEMBL
Match: A0A0A0KI19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318680 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.7e-23
Identity = 71/98 (72.45%), Postives = 74/98 (75.51%), Query Frame = 1

Query: 1  MGRREREIKDTRADLAMIGREGFKLIDEFFGRAPAT---RKVAATERAP-QPQPPHK-AE 60
          MGRREREI DT A+LA IG EGFKLID+FFGRA  T   R VAATE  P Q QPP K AE
Sbjct: 1  MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAE 60

Query: 61 QPPWKKKEKPAAAVTSDQLAKIRGGIVITTWRANAKRK 94
          QPP K KEK  A VTSD LAK RGGIVITTWR+ AKRK
Sbjct: 61 QPPSKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAKRK 98

BLAST of Lsi09G014520 vs. TrEMBL
Match: A0A0A0KG95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318690 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-21
Identity = 62/91 (68.13%), Postives = 71/91 (78.02%), Query Frame = 1

Query: 4  REREIKDTRADLAMIGREGFKLIDEFFGRAPAT--RKVAA-TERAPQPQPPHKAEQPPWK 63
          REREI+ +R DLA IGREGF++IDE+FGRA +T  R+VAA T R   PQPP KAEQPP  
Sbjct: 5  REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRI 64

Query: 64 KKEKPAAAVTSDQLAKIRGGIVITTWRANAK 92
          +KEKP AAVTSDQ+AK  GG VITTWR  AK
Sbjct: 65 RKEKPVAAVTSDQVAKHGGGTVITTWRPYAK 95

BLAST of Lsi09G014520 vs. NCBI nr
Match: gi|700192217|gb|KGN47421.1| (hypothetical protein Csa_6G318680 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 8.2e-23
Identity = 71/98 (72.45%), Postives = 74/98 (75.51%), Query Frame = 1

Query: 1  MGRREREIKDTRADLAMIGREGFKLIDEFFGRAPAT---RKVAATERAP-QPQPPHK-AE 60
          MGRREREI DT A+LA IG EGFKLID+FFGRA  T   R VAATE  P Q QPP K AE
Sbjct: 1  MGRREREIIDTDANLARIGIEGFKLIDKFFGRASTTGGRRVVAATEMRPAQMQPPRKVAE 60

Query: 61 QPPWKKKEKPAAAVTSDQLAKIRGGIVITTWRANAKRK 94
          QPP K KEK  A VTSD LAK RGGIVITTWR+ AKRK
Sbjct: 61 QPPSKTKEKQGAVVTSDHLAKTRGGIVITTWRSYAKRK 98

BLAST of Lsi09G014520 vs. NCBI nr
Match: gi|700192218|gb|KGN47422.1| (hypothetical protein Csa_6G318690 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 3.5e-21
Identity = 62/91 (68.13%), Postives = 71/91 (78.02%), Query Frame = 1

Query: 4  REREIKDTRADLAMIGREGFKLIDEFFGRAPAT--RKVAA-TERAPQPQPPHKAEQPPWK 63
          REREI+ +R DLA IGREGF++IDE+FGRA +T  R+VAA T R   PQPP KAEQPP  
Sbjct: 5  REREIRGSRGDLAKIGREGFQIIDEYFGRASSTGARRVAAKTARPALPQPPRKAEQPPRI 64

Query: 64 KKEKPAAAVTSDQLAKIRGGIVITTWRANAK 92
          +KEKP AAVTSDQ+AK  GG VITTWR  AK
Sbjct: 65 RKEKPVAAVTSDQVAKHGGGTVITTWRPYAK 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KI19_CUCSA5.7e-2372.45Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318680 PE=4 SV=1[more]
A0A0A0KG95_CUCSA2.4e-2168.13Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318690 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700192217|gb|KGN47421.1|8.2e-2372.45hypothetical protein Csa_6G318680 [Cucumis sativus][more]
gi|700192218|gb|KGN47422.1|3.5e-2168.13hypothetical protein Csa_6G318690 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G014520.1Lsi09G014520.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G014520Bottle gourd (USVL1VR-Ls)lsilsiB006
Lsi09G014520Cucumber (Gy14) v1cgylsiB068
Lsi09G014520Cucumber (Gy14) v1cgylsiB412
Lsi09G014520Cucurbita maxima (Rimu)cmalsiB225
Lsi09G014520Cucurbita maxima (Rimu)cmalsiB331
Lsi09G014520Cucurbita maxima (Rimu)cmalsiB741
Lsi09G014520Cucurbita maxima (Rimu)cmalsiB811
Lsi09G014520Cucurbita moschata (Rifu)cmolsiB213
Lsi09G014520Cucurbita moschata (Rifu)cmolsiB320
Lsi09G014520Cucurbita moschata (Rifu)cmolsiB797
Lsi09G014520Cucurbita pepo (Zucchini)cpelsiB101
Lsi09G014520Cucurbita pepo (Zucchini)cpelsiB247
Lsi09G014520Cucurbita pepo (Zucchini)cpelsiB484
Lsi09G014520Cucurbita pepo (Zucchini)cpelsiB697
Lsi09G014520Wild cucumber (PI 183967)cpilsiB149
Lsi09G014520Wild cucumber (PI 183967)cpilsiB405
Lsi09G014520Cucumber (Chinese Long) v2culsiB150
Lsi09G014520Cucumber (Chinese Long) v2culsiB403
Lsi09G014520Melon (DHL92) v3.5.1lsimeB017
Lsi09G014520Melon (DHL92) v3.5.1lsimeB029
Lsi09G014520Watermelon (Charleston Gray)lsiwcgB017
Lsi09G014520Watermelon (Charleston Gray)lsiwcgB029
Lsi09G014520Watermelon (97103) v1lsiwmB017
Lsi09G014520Watermelon (97103) v1lsiwmB040
Lsi09G014520Cucumber (Gy14) v2cgyblsiB136
Lsi09G014520Cucumber (Gy14) v2cgyblsiB367
Lsi09G014520Melon (DHL92) v3.6.1lsimedB019
Lsi09G014520Melon (DHL92) v3.6.1lsimedB032
Lsi09G014520Melon (DHL92) v3.6.1lsimedB042
Lsi09G014520Silver-seed gourdcarlsiB061
Lsi09G014520Silver-seed gourdcarlsiB252
Lsi09G014520Silver-seed gourdcarlsiB641
Lsi09G014520Cucumber (Chinese Long) v3cuclsiB163
Lsi09G014520Cucumber (Chinese Long) v3cuclsiB265
Lsi09G014520Cucumber (Chinese Long) v3cuclsiB425
Lsi09G014520Watermelon (97103) v2lsiwmbB015
Lsi09G014520Watermelon (97103) v2lsiwmbB026
Lsi09G014520Wax gourdlsiwgoB025
Lsi09G014520Wax gourdlsiwgoB041