Lsi08G002060 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi08G002060
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPolygalacturonase
Locationchr08 : 4463195 .. 4464709 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCGTCACATTACTTGAAAAGAGCAGTAGTTTGATTCCATTCATTGTGTTAGTGACATTAATGAATTTGAGTAGCTTTGGTAATGCATGGTCTTACAATGTTGTTAGCTTTGGAGCCAAAGGTGATGGGAGAACTGATTCAACACAAGCATTTCAAAGGGCATGGTCTAATGCTTGTGCCTCTACAAAACCAACCACTATTTATGTCCCACGGGGAAGATATTACCTTCAGAGTGGAACTTTCAACGGACCTTGCAACAATAATGCAATCTTTATCCGCATCGATGGTACTTTGGTGGCTCCCTCCGACTTCCAAGTTATTGGAAACTCTGCAGCTTGGATCGTGTTTAGACACATTGATGGAGTTACTATCTCAGGTGGCAATCTCGATGGGAAAGGAGCTGCCTTATGGGCTTGCAAGAATTCTTCTACTGGCACTACTTGCCCAACTGGTGCTACGGTATGCAAATTAACTAATTAAACCATAATTCTTCTCAAATTATTATATTCTTTATTAAATGCTAGATTTCTCTCTTTTACATGCAGACCCTTGAATTCTCCAACTCCAAAAATGTAATAGTCAGTGCATTGACATCACTCAATAGCCAAATGTTCCACATAGTCATCAATGGTTGCCAAAATGTCATGATGAAAGGTCTTAAGGTCTTGGCTTCTGGCAATAGTCCCAACACAGACGGAGTTCATGTGCAATTGTCGTCTGATGTGACCATACTGAACTCTAAGATAGGTACTGGAGATGACTGCATTTCCATCGGCCCTGGCACTTCCAACTTATGGATTGAAAATATTGTCTGTGGACCTGGTCATGGAATAAGGTAAAAATTTTTGAAATATATATATAACTAGTTTTCCATAAGAAGAAAATTATAAAGTGAATAAATTCTTAATCACAAATGTTTGTGCAATAATTTGGTTGTTTATAATTTGCAGCATTGGGAGTCTAGCAAAAGATCTACAAGAGGCTGGGGTCCAAAATATTACTGTGAAGAACATTGTATTTTCACGCACTCAAAATGGGGTAAGAATCAAAGCATGGGGCAAGCCCAGCAATGGATTTGCTAGGAACATTCTTTTCCAACATATTGTAATGGACAATGTCCAAAATCCAATTGTTATCGATCAAAATTATTGTCCAAGCCACGAAGGTTGTCCGGGCAAGGTATGAATATTTAATTAATTTAATATTCTCTGATCATCCATCATATGAAGAATTTGACTAATTAAGTTCTAAGTTTTTTTTTTCCAATTTTCTTACTCTATCATATTATAGGCTTCTGGGGTTAAAATTAACGACGTGACATACCATGACATCCATGGAACATCAGCCACCGAAGTTGCAGTGAAGTTCGATTGCAGTCCAATAAATCCATGTGTTGGAATAAAGTTAGACGACGTAAGACTTACATATATGAATCAAACCGCCCAAGCTACCTGCAACAATGCAGAAGGGATTGTAGCTAGTCAAGTTCAACCCTCTACTTGCTTCTAG

mRNA sequence

ATGAAGATCGTCACATTACTTGAAAAGAGCAGTAGTTTGATTCCATTCATTGTGTTAGTGACATTAATGAATTTGAGTAGCTTTGGTAATGCATGGTCTTACAATGTTGTTAGCTTTGGAGCCAAAGGTGATGGGAGAACTGATTCAACACAAGCATTTCAAAGGGCATGGTCTAATGCTTGTGCCTCTACAAAACCAACCACTATTTATGTCCCACGGGGAAGATATTACCTTCAGAGTGGAACTTTCAACGGACCTTGCAACAATAATGCAATCTTTATCCGCATCGATGGTACTTTGGTGGCTCCCTCCGACTTCCAAGTTATTGGAAACTCTGCAGCTTGGATCGTGTTTAGACACATTGATGGAGTTACTATCTCAGGTGGCAATCTCGATGGGAAAGGAGCTGCCTTATGGGCTTGCAAGAATTCTTCTACTGGCACTACTTGCCCAACTGGTGCTACGACCCTTGAATTCTCCAACTCCAAAAATGTAATAGTCAGTGCATTGACATCACTCAATAGCCAAATGTTCCACATAGTCATCAATGGTTGCCAAAATGTCATGATGAAAGGTCTTAAGGTCTTGGCTTCTGGCAATAGTCCCAACACAGACGGAGTTCATGTGCAATTGTCGTCTGATGTGACCATACTGAACTCTAAGATAGGTACTGGAGATGACTGCATTTCCATCGGCCCTGGCACTTCCAACTTATGGATTGAAAATATTGTCTGTGGACCTGGTCATGGAATAAGCATTGGGAGTCTAGCAAAAGATCTACAAGAGGCTGGGGTCCAAAATATTACTGTGAAGAACATTGTATTTTCACGCACTCAAAATGGGGTAAGAATCAAAGCATGGGGCAAGCCCAGCAATGGATTTGCTAGGAACATTCTTTTCCAACATATTGTAATGGACAATGTCCAAAATCCAATTGTTATCGATCAAAATTATTGTCCAAGCCACGAAGGTTGTCCGGGCAAGGCTTCTGGGGTTAAAATTAACGACGTGACATACCATGACATCCATGGAACATCAGCCACCGAAGTTGCAGTGAAGTTCGATTGCAGTCCAATAAATCCATGTGTTGGAATAAAGTTAGACGACGTAAGACTTACATATATGAATCAAACCGCCCAAGCTACCTGCAACAATGCAGAAGGGATTGTAGCTAGTCAAGTTCAACCCTCTACTTGCTTCTAG

Coding sequence (CDS)

ATGAAGATCGTCACATTACTTGAAAAGAGCAGTAGTTTGATTCCATTCATTGTGTTAGTGACATTAATGAATTTGAGTAGCTTTGGTAATGCATGGTCTTACAATGTTGTTAGCTTTGGAGCCAAAGGTGATGGGAGAACTGATTCAACACAAGCATTTCAAAGGGCATGGTCTAATGCTTGTGCCTCTACAAAACCAACCACTATTTATGTCCCACGGGGAAGATATTACCTTCAGAGTGGAACTTTCAACGGACCTTGCAACAATAATGCAATCTTTATCCGCATCGATGGTACTTTGGTGGCTCCCTCCGACTTCCAAGTTATTGGAAACTCTGCAGCTTGGATCGTGTTTAGACACATTGATGGAGTTACTATCTCAGGTGGCAATCTCGATGGGAAAGGAGCTGCCTTATGGGCTTGCAAGAATTCTTCTACTGGCACTACTTGCCCAACTGGTGCTACGACCCTTGAATTCTCCAACTCCAAAAATGTAATAGTCAGTGCATTGACATCACTCAATAGCCAAATGTTCCACATAGTCATCAATGGTTGCCAAAATGTCATGATGAAAGGTCTTAAGGTCTTGGCTTCTGGCAATAGTCCCAACACAGACGGAGTTCATGTGCAATTGTCGTCTGATGTGACCATACTGAACTCTAAGATAGGTACTGGAGATGACTGCATTTCCATCGGCCCTGGCACTTCCAACTTATGGATTGAAAATATTGTCTGTGGACCTGGTCATGGAATAAGCATTGGGAGTCTAGCAAAAGATCTACAAGAGGCTGGGGTCCAAAATATTACTGTGAAGAACATTGTATTTTCACGCACTCAAAATGGGGTAAGAATCAAAGCATGGGGCAAGCCCAGCAATGGATTTGCTAGGAACATTCTTTTCCAACATATTGTAATGGACAATGTCCAAAATCCAATTGTTATCGATCAAAATTATTGTCCAAGCCACGAAGGTTGTCCGGGCAAGGCTTCTGGGGTTAAAATTAACGACGTGACATACCATGACATCCATGGAACATCAGCCACCGAAGTTGCAGTGAAGTTCGATTGCAGTCCAATAAATCCATGTGTTGGAATAAAGTTAGACGACGTAAGACTTACATATATGAATCAAACCGCCCAAGCTACCTGCAACAATGCAGAAGGGATTGTAGCTAGTCAAGTTCAACCCTCTACTTGCTTCTAG

Protein sequence

MKIVTLLEKSSSLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYVPRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVRLTYMNQTAQATCNNAEGIVASQVQPSTCF
BLAST of Lsi08G002060 vs. Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 3.6e-152
Identity = 256/388 (65.98%), Postives = 312/388 (80.41%), Query Frame = 1

Query: 12  SLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYV 71
           SL    ++   M  S+  +  +YNV S GAK DG+TDST+AF  AW+ ACAS  P  IYV
Sbjct: 6   SLFSLSLIFVFMINSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYV 65

Query: 72  PRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGNL 131
           P G ++L+   F+GPC NNAI  RI GTLVAPSD++VIGN+A WI F H++GVTISGG L
Sbjct: 66  PAGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGIL 125

Query: 132 DGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMK 191
           DG+G ALWACK +  G +CP+GATTL FS+S N++VS L SLNSQMFHIVIN  QNV M+
Sbjct: 126 DGQGTALWACK-ACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQ 185

Query: 192 GLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGI 251
           G++V  SGNSPNTDG+HVQ+SS VTILNSKI TGDDC+SIGPGTSNLWIE + CGPGHGI
Sbjct: 186 GVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGI 245

Query: 252 SIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNP 311
           SIGSL K+ +EAGVQN+TVK + FS TQNG+RIK+WG+PS GFARNILFQH  M NV+NP
Sbjct: 246 SIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENP 305

Query: 312 IVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVR 371
           IVIDQ+YCP ++GCPG+ SGV+I+DVTY DIHGTSATEVAVKFDCSP +PC  IKL+DV+
Sbjct: 306 IVIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVK 365

Query: 372 LTYMNQTAQATCNNAEGIVASQVQPSTC 400
           LTY NQ A+++C++A+G     VQP++C
Sbjct: 366 LTYKNQAAESSCSHADGTTEGVVQPTSC 392

BLAST of Lsi08G002060 vs. Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.6e-113
Identity = 213/393 (54.20%), Postives = 275/393 (69.97%), Query Frame = 1

Query: 10  SSSLIPFIVLV---TLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKP 69
           S  ++P  +++   TL++  +     + NV+S+GAK DG  DST+AF  AW  ACAS  P
Sbjct: 6   SCLILPLALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACASANP 65

Query: 70  TTIYVPRGRYYLQSGTFNG-PCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVT 129
           TTI VP+GR+ + +  F+G  C    I IRI G++VAP DF++I +S  WI F  +  V+
Sbjct: 66  TTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVS 125

Query: 130 ISGGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGC 189
           I GG LD +G +LW CKN+  G  CPTGA +L FS S N+ +S LTS+NSQ FHIVI+  
Sbjct: 126 IYGGILDAQGTSLWKCKNNG-GHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNS 185

Query: 190 QNVMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVC 249
            NV + G+KV A  NSPNTDG+HV+ S  V I NS+IGTGDDCISIGPG++N++I+ I C
Sbjct: 186 NNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRC 245

Query: 250 GPGHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVM 309
           GPGHGISIGSL +  +E GV N+TV N+ F  T NGVRIK WGK SN FARNI+FQHI M
Sbjct: 246 GPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINM 305

Query: 310 DNVQNPIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGI 369
             V+NPI+IDQ+YC  H+ CP + SGVK+++V Y DIHGTS TEVAV  DCS   PC GI
Sbjct: 306 KMVKNPIIIDQHYC-LHKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGI 365

Query: 370 KLDDVRLTYMNQTAQATCNNAEGIVASQVQPST 399
            +DDV L  +++ AQA+C+NA G  A+ V P T
Sbjct: 366 VMDDVNLVSVHRPAQASCDNANG-SANDVVPFT 395

BLAST of Lsi08G002060 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 8.9e-82
Identity = 157/367 (42.78%), Postives = 221/367 (60.22%), Query Frame = 1

Query: 34  YNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYVPRGRYYLQSGTFNGPCNNNAIF 93
           +NV  +GAKG G  D +QA  +AW  ACAS  P+T+ +P+G Y +      GPC  + I 
Sbjct: 10  FNVNDYGAKGAG--DISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIG 69

Query: 94  IRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISG-GNLDGKGAALWACKNSSTGTTCPT 153
            +IDG + AP+D      S  W+ F  IDG+T+SG G LDG+G   WA  N      C  
Sbjct: 70  FQIDGVVKAPADPSKF-KSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKH 129

Query: 154 GATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMKGLKVLASGNSPNTDGVHVQLS 213
            A  L F   K+ +V  +TSLNS+MFHI +  C+++  + + V A G S NTDG+HV +S
Sbjct: 130 AAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGIS 189

Query: 214 SDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLQEAGVQNITVKN 273
             VTI N+KI TGDDCISIGPG+ N+ I  + CGPGHGISIGSL +   E  V+ ITVK 
Sbjct: 190 KGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKG 249

Query: 274 IVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHEGCPGKASGV 333
             FS T NGVR+K W     G A ++ FQ + M+NVQNP+++DQ YCP  +      S +
Sbjct: 250 CTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRI 309

Query: 334 KINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVRLTYMNQ--TAQATCNNAEGIV 393
           K++++ +++I GTS  +VAV   CS   PC  +K+ ++ L+Y      A +TC+N +   
Sbjct: 310 KLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTF 369

Query: 394 ASQVQPS 398
           + +  P+
Sbjct: 370 SGKQVPA 373

BLAST of Lsi08G002060 vs. Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 286.6 bits (732), Expect = 4.3e-76
Identity = 150/369 (40.65%), Postives = 218/369 (59.08%), Query Frame = 1

Query: 35  NVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYVPRGRYYLQSGTFNGPCNNNAIFI 94
           +V + GAKGD +TD + AF  AW  ACA+   +TI VP+G Y ++S  F GPC    + +
Sbjct: 71  DVKASGAKGDSKTDDSAAFAAAWKEACAAG--STITVPKGEYMVESLEFKGPCKG-PVTL 130

Query: 95  RIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGN--LDGKGAALWACKNSSTGTTCPT 154
            ++G   AP+  +     A WI F +I   T++G     DG+G+  W   + +    C +
Sbjct: 131 ELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNS 190

Query: 155 GATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMKGLKVLASGNSPNTDGVHVQLS 214
               + F+   N  ++++TS NS++FH+ I  C+N+ +  + + A   S NTDG+H+  S
Sbjct: 191 LPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRS 250

Query: 215 SDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLQEAGVQNITVKN 274
           + V ++ +KI TGDDC+SIG GT NL +EN+ CGPGHGISIGSL +   E  V+ +TV+ 
Sbjct: 251 NGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRK 310

Query: 275 IVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHEGCPGKASGV 334
            +   T NGVRIK W     G A NILF+ I MDNV  P++IDQ YCP      G  S V
Sbjct: 311 CLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQV 370

Query: 335 KINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVRLTYMNQ--TAQATCNNAEGIV 394
           K++DVT   I GTSAT+VAVK  CS   PC  I L D+ L +  +   A + C+N + I+
Sbjct: 371 KLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPIL 430

Query: 395 ASQVQPSTC 400
           + ++ P+ C
Sbjct: 431 SGKLVPAAC 436

BLAST of Lsi08G002060 vs. Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 285.4 bits (729), Expect = 9.5e-76
Identity = 160/368 (43.48%), Postives = 219/368 (59.51%), Query Frame = 1

Query: 35  NVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYVPRGR-YYLQSGTFNGPCNNNAIF 94
           +V  FGAKGDG+TD TQAF  AW  AC+S     + VP+G  Y L+S    GPCN+  + 
Sbjct: 69  SVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPCNS-ILT 128

Query: 95  IRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGN---LDGKGAALW--ACKNSSTGT 154
           ++I GTL A        + + WI+F  ++ +++ GG+   +DG G   W  +CK +    
Sbjct: 129 VQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKRNKA-K 188

Query: 155 TCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMKGLKVLASGNSPNTDGVH 214
            C    T L F NSK++IV  L   N+Q   I I  C NV +  + V A  +SPNTDG+H
Sbjct: 189 PCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIH 248

Query: 215 VQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLQEAGVQNI 274
           +  + ++ +  S IGTGDDCISI  G+ N+ I +I CGPGHGISIGSL  D  +A V  +
Sbjct: 249 ITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFVSGV 308

Query: 275 TVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHEGCPGK 334
           TV     S T NGVRIK + +  +G A NI+FQ+I MDNV+NPI+IDQ+YC   + C  +
Sbjct: 309 TVDGAKLSGTDNGVRIKTY-QGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSK-CTTE 368

Query: 335 ASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVRLTYMNQTAQATCNNAEG 394
            S V++ +V Y DI GTSA+E A+ F+CS   PC GI LD V +    +  +ATC NA  
Sbjct: 369 KSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI----KGGKATCTNANV 428

Query: 395 IVASQVQP 397
           +    V P
Sbjct: 429 VDKGAVLP 428

BLAST of Lsi08G002060 vs. TrEMBL
Match: A0A0A0LY60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662770 PE=3 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 9.9e-173
Identity = 289/393 (73.54%), Postives = 339/393 (86.26%), Query Frame = 1

Query: 7   LEKSSSLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKP 66
           L+ + SL+  I+LV L + S+F +A SYNVV FG KGDG TDSTQAFQ AW+NACASTK 
Sbjct: 6   LDNNHSLLSLILLVGLSSWSTFVDASSYNVVDFGGKGDGTTDSTQAFQTAWTNACASTKK 65

Query: 67  TTIYVPRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTI 126
            TIYVPRGRY LQ+ TF+GPC N AI  RIDG++ APSD+ VIGNSAAW+VFRH+DG+TI
Sbjct: 66  ATIYVPRGRYCLQNVTFSGPCKNKAIIFRIDGSMEAPSDYLVIGNSAAWVVFRHVDGMTI 125

Query: 127 SGGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQ 186
            GG+LDGKGAALWACKNSS    CPTGATTLEFSNSKNV+V+ L SLNSQMFH+ INGC+
Sbjct: 126 LGGSLDGKGAALWACKNSSYNALCPTGATTLEFSNSKNVVVNNLKSLNSQMFHVAINGCE 185

Query: 187 NVMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCG 246
           NVM+KGL+V AS NSPNTDG+HVQ SS+VTI+NSKIGTGDDCIS+GPG SNL I+NI CG
Sbjct: 186 NVMVKGLRVSASSNSPNTDGIHVQSSSNVTIINSKIGTGDDCISVGPGVSNLQIQNISCG 245

Query: 247 PGHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMD 306
           PGHGISIGSL KD++E GVQN+T+KN+VFSRT+NGVRIK WGKPSNGFA +I+FQHIVM+
Sbjct: 246 PGHGISIGSLGKDVKEIGVQNVTIKNVVFSRTENGVRIKTWGKPSNGFATDIVFQHIVMN 305

Query: 307 NVQNPIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIK 366
           NV NPIVIDQNYCP+H+GCPG+ASG+KI++VTY DI GTS T+VA+ FDCSP NPC+GIK
Sbjct: 306 NVHNPIVIDQNYCPTHKGCPGQASGIKISNVTYQDIQGTSTTKVAIMFDCSPTNPCIGIK 365

Query: 367 LDDVRLTYMNQTAQATCNNAEGIVASQVQPSTC 400
           L++V LTY NQTA+A CNNA GIV  QVQP+ C
Sbjct: 366 LENVSLTYKNQTAEARCNNARGIVVGQVQPTAC 398

BLAST of Lsi08G002060 vs. TrEMBL
Match: E5GBC3_CUCME (Polygalacturonase OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 1.6e-162
Identity = 280/328 (85.37%), Postives = 301/328 (91.77%), Query Frame = 1

Query: 1   MKIVTLLEKSSSLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNA 60
           M I+   +  SS I  IVLV LMNL +FGNAWSYNVVSFG KGDGRTDSTQAFQ  WSNA
Sbjct: 1   MMIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNA 60

Query: 61  CASTKPTTIYVPRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRH 120
           C+STKP TIYVPRGRYYL+SGTFNGPC NNAIFIRIDGTLVAPSDFQVIGNS AWI FR+
Sbjct: 61  CSSTKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRN 120

Query: 121 IDGVTISGGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHI 180
           +DGVT+SGGNLDGKGA LWACKNSS+ TTCP+GATTL+FSNSKNV+VSALTSLNSQMFHI
Sbjct: 121 VDGVTVSGGNLDGKGAGLWACKNSSSSTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHI 180

Query: 181 VINGCQNVMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWI 240
           VINGCQNV M+G+KVLASGNSPNTDG+H Q+SS+V +LNSKIGTGDDCISIGPGTSNL I
Sbjct: 181 VINGCQNVTMRGIKVLASGNSPNTDGIHGQMSSNVAVLNSKIGTGDDCISIGPGTSNLRI 240

Query: 241 ENIVCGPGHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILF 300
           ENIVCGPGHGISIGSLAKDLQE GVQN+TVKN+VFSRTQNGVRIKAWGKPSNGFAR ILF
Sbjct: 241 ENIVCGPGHGISIGSLAKDLQEEGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARKILF 300

Query: 301 QHIVMDNVQNPIVIDQNYCPSHEGCPGK 329
           QHIVMDNVQNPIVIDQNYCP H+GCPGK
Sbjct: 301 QHIVMDNVQNPIVIDQNYCPRHKGCPGK 328

BLAST of Lsi08G002060 vs. TrEMBL
Match: B9SSX1_RICCO (Polygalacturonase, putative OS=Ricinus communis GN=RCOM_1267820 PE=3 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 5.3e-158
Identity = 269/388 (69.33%), Postives = 318/388 (81.96%), Query Frame = 1

Query: 12  SLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYV 71
           S   F+ L+ L+  SS   A  YNV+S+GAK DGRTDST+AF  AW+ AC STKP TIYV
Sbjct: 7   SSFSFLALLILLFTSSLATAAQYNVLSYGAKPDGRTDSTKAFLAAWTQACGSTKPPTIYV 66

Query: 72  PRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGNL 131
           P G+++L+  +F GPC NNAI  RIDGTLVAPSD++VIGN+  W+ F+H++GVTISGG L
Sbjct: 67  PSGKFFLKDLSFGGPCKNNAILFRIDGTLVAPSDYKVIGNAGYWLYFQHVNGVTISGGIL 126

Query: 132 DGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMK 191
           DG+G+ LWACK S  G  CP+GAT+L FSNSKN+ ++ LTS NSQMFHIVINGCQNV ++
Sbjct: 127 DGQGSGLWACKAS--GKNCPSGATSLGFSNSKNIAINGLTSQNSQMFHIVINGCQNVKVQ 186

Query: 192 GLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGI 251
           G+ V ASG+SPNTDG+HVQ S  VTILNSKI TGDDCISIGPG +NLWIENI CGPGHGI
Sbjct: 187 GVTVSASGDSPNTDGIHVQQSGGVTILNSKIRTGDDCISIGPGATNLWIENIACGPGHGI 246

Query: 252 SIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNP 311
           SIGSL KDLQEAGVQN+TVK + F+ TQNGVRIK+WG+PS+GFARNILFQH +M NVQNP
Sbjct: 247 SIGSLGKDLQEAGVQNVTVKTVTFTGTQNGVRIKSWGRPSSGFARNILFQHAIMTNVQNP 306

Query: 312 IVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVR 371
           IVIDQNYCP ++ CPG+ SGVKI+ VTY DIHGTSATEVAVKFDCS   PC GIKL+DV+
Sbjct: 307 IVIDQNYCPDNKNCPGQESGVKISGVTYQDIHGTSATEVAVKFDCSKKEPCTGIKLEDVK 366

Query: 372 LTYMNQTAQATCNNAEGIVASQVQPSTC 400
           LTY NQ A A+CNNA+G  +  VQPS+C
Sbjct: 367 LTYKNQPADASCNNADGTASGFVQPSSC 392

BLAST of Lsi08G002060 vs. TrEMBL
Match: S5MMR8_9ROSA (Polygalacturonase 2 OS=Pyrus x bretschneideri GN=PG2 PE=2 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 1.1e-155
Identity = 269/396 (67.93%), Postives = 319/396 (80.56%), Query Frame = 1

Query: 9   KSSSLIPFIVLVTLMNLSSFGN----AWSYNVVSFGAKGDGRTDSTQAFQRAWSNACAST 68
           KS S     V   LM   S  N    A +++V S GAK DG TDST+AF  AWSNACAS 
Sbjct: 5   KSLSYPAAAVFALLMMAISITNVDAAAVTFSVSSLGAKADGSTDSTKAFLSAWSNACASV 64

Query: 69  KPTTIYVPRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGV 128
            P  IYVP GR+ L +  F+GPC NNAI  RI GTLVAPSD+QVIGN+  W++F+H++GV
Sbjct: 65  NPAVIYVPAGRFLLSNAVFSGPCKNNAITFRIAGTLVAPSDYQVIGNAGNWLLFQHVNGV 124

Query: 129 TISGGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVING 188
           TISGG LDG+G  LW CK+S  G +CP+GATTL FSNS NV+VS L SLNSQMFHIV+NG
Sbjct: 125 TISGGVLDGQGTGLWDCKSS--GKSCPSGATTLSFSNSNNVVVSGLVSLNSQMFHIVVNG 184

Query: 189 CQNVMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIV 248
           CQNV M+G+KV A+GNSPNTDG+HVQ+SS VTIL+SKI TGDDC+S+GPGT+NLWIEN+ 
Sbjct: 185 CQNVKMQGVKVNAAGNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVA 244

Query: 249 CGPGHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIV 308
           CGPGHGISIGSL KD QEAGVQN+TVK I F+ T+NGVRIK+WG+PS GFAR+ILFQHIV
Sbjct: 245 CGPGHGISIGSLGKDQQEAGVQNVTVKTITFTGTENGVRIKSWGRPSTGFARSILFQHIV 304

Query: 309 MDNVQNPIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVG 368
           M NVQNPI+IDQNYCP+ +GCPG+ASGVK++DVTY DIHGTSATEVAVKFDCS + PC G
Sbjct: 305 MTNVQNPIIIDQNYCPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNG 364

Query: 369 IKLDDVRLTYMNQTAQATCNNAEGIVASQVQPSTCF 401
           I+L DV+LTY NQ A+A+C +A G  A  VQP++CF
Sbjct: 365 IRLQDVKLTYNNQAAEASCIHAGGTTAGTVQPTSCF 398

BLAST of Lsi08G002060 vs. TrEMBL
Match: A0A067EKY6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041993mg PE=3 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 1.1e-155
Identity = 259/383 (67.62%), Postives = 316/383 (82.51%), Query Frame = 1

Query: 17  IVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYVPRGRY 76
           I+L+++ N SS     SYNVVSFGAK DGRTDST+AF  AW+NAC S +  TIYVP GR+
Sbjct: 10  ILLLSIFNTSSLAAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRF 69

Query: 77  YLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGNLDGKGA 136
           +L++  F GPC NN I IRIDGTLVAPSD++VIGN+  W+ F+H+DGVT++ G LDG+G 
Sbjct: 70  FLRNVAFQGPCKNNRITIRIDGTLVAPSDYRVIGNAGNWLFFQHVDGVTLNSGILDGQGT 129

Query: 137 ALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMKGLKVL 196
           ALWACKNS  G  CP+GAT++ FSN  N+ ++ LTSLNSQM+H+V NGC NV +KG+KVL
Sbjct: 130 ALWACKNS--GKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVL 189

Query: 197 ASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSL 256
           ASGNSPNTDG+HVQLSSDVTILN++I TGDDC+SIGPGTSNLWIEN+ CGPGHGISIGSL
Sbjct: 190 ASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSL 249

Query: 257 AKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQ 316
            KDL EAGVQN+TVK + F+ TQNG+RIK+WG+PSNGFARNILF++ +M NVQNPI+IDQ
Sbjct: 250 GKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQNPIIIDQ 309

Query: 317 NYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVRLTYMN 376
           NYCP + GCPG+ SGVKI+DVTY D+HGTSATEVAV FDCS   PC  I+L+DV+LTY N
Sbjct: 310 NYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDCSSKYPCSRIRLEDVKLTYKN 369

Query: 377 QTAQATCNNAEGIVASQVQPSTC 400
           Q A A+C++A+G  +  VQP  C
Sbjct: 370 QPAAASCSHADGSASGLVQPKGC 390

BLAST of Lsi08G002060 vs. TAIR10
Match: AT2G43870.1 (AT2G43870.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 500.4 bits (1287), Expect = 1.1e-141
Identity = 238/382 (62.30%), Postives = 299/382 (78.27%), Query Frame = 1

Query: 17  IVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYVPRGRY 76
           +VL     +SS  +A SYNV+SFGAK DG+TD+T+AF   W  ACAS++P TI VP+GR+
Sbjct: 5   LVLFVFFFISSC-SAQSYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKGRF 64

Query: 77  YLQSGTFNGP-CNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGNLDGKG 136
            L+S TF+G  C    +  RIDGTLVAP+D++VIGN   WI F+H+DG+T+ GG LD +G
Sbjct: 65  LLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARG 124

Query: 137 AALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMKGLKV 196
           A+LW CK S  G  CP+GATT+ F +S NV+VS LTSLNSQMFH+VINGC NV ++G+KV
Sbjct: 125 ASLWDCKKS--GKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKV 184

Query: 197 LASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGS 256
           LA+GNSPNTDG+HVQ SS V+I N+KI TGDDC+SIGPGT+ LWIEN+ CGPGHGISIGS
Sbjct: 185 LAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGS 244

Query: 257 LAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVID 316
           L KD  E+GVQN+TVK + F+ T NGVRIK+W +PS+GFA+NI FQH VM+NV+NPI+ID
Sbjct: 245 LGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIID 304

Query: 317 QNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVRLTYM 376
           QNYCP H+ CP + SG+KI+DV + DIHGTSATEV VK DCS   PC GI+L+DV+LTY 
Sbjct: 305 QNYCPDHD-CPRQVSGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQ 364

Query: 377 NQTAQATCNNAEGIVASQVQPS 398
           N+ A + C +A GI A   QP+
Sbjct: 365 NKPAASACTHAGGIEAGFFQPN 382

BLAST of Lsi08G002060 vs. TAIR10
Match: AT3G59850.1 (AT3G59850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 497.3 bits (1279), Expect = 9.0e-141
Identity = 238/390 (61.03%), Postives = 304/390 (77.95%), Query Frame = 1

Query: 11  SSLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIY 70
           SSL+  IVL+ L+++SS  +A +YN++S+GAK DG+TDST+AF   W+ ACAS KP TI 
Sbjct: 3   SSLL--IVLLFLLSVSS-SSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTIL 62

Query: 71  VPRGRYYLQSGTFNGP-CNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGG 130
           VP+GR+ L+S  F+G  C   ++  RI GTLVAPSD++VIG    WI+F+H+DG+++ GG
Sbjct: 63  VPKGRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGG 122

Query: 131 NLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVM 190
            LD +GA+LW+CK S  G  CP+GAT++ F +S+NV++S LTSLNSQMFH+ INGC NV 
Sbjct: 123 VLDAQGASLWSCKKS--GKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVK 182

Query: 191 MKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGH 250
           + G+KV A GNSPNTDG+HVQ SS V+ILNSKI TGDDC+SIGPGT+ LWIEN+ CGPGH
Sbjct: 183 LDGVKVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGH 242

Query: 251 GISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQ 310
           GISIGSL K+  E GVQNITVK   F+ T+NGVRIK+W +PSNGFA+NI FQH VM+NVQ
Sbjct: 243 GISIGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQ 302

Query: 311 NPIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDD 370
           NPIVIDQNYCP +E CP + SG+KI+DV + DIHGTSATEV VK DCS   PC GI++ D
Sbjct: 303 NPIVIDQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQD 362

Query: 371 VRLTYMNQTAQATCNNAEGIVASQVQPSTC 400
           V+LTY N+ A   C++A G  A   +P++C
Sbjct: 363 VKLTYRNKPATTDCSHAGGSEAGFQRPNSC 387

BLAST of Lsi08G002060 vs. TAIR10
Match: AT2G43890.1 (AT2G43890.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 425.2 bits (1092), Expect = 4.3e-119
Identity = 207/389 (53.21%), Postives = 276/389 (70.95%), Query Frame = 1

Query: 17  IVLVTLMNLSSF------GNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIY 76
           +V V LM  SSF        A +YNVVSFGAK DGRTDST+AF  AW  AC S    T+ 
Sbjct: 6   LVAVLLMFFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVT 65

Query: 77  VPRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGN 136
           VPRG + L+   F GPC +   F +I GT+VAPSD++ +GNS  WI+F  ++ ++I GG 
Sbjct: 66  VPRGSFLLKPVEFRGPCRSRITF-QIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGT 125

Query: 137 LDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMM 196
           LD +GA+ WAC+ S  G +CP GA ++ F+ + +V+VS LTS+NSQ  H+VIN C NV++
Sbjct: 126 LDARGASFWACRKS--GKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIV 185

Query: 197 KGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHG 256
           + +K++A   SPNTDG+HVQ S+ VT+ +    TGDDCISIGPGT NL++  + CGPGHG
Sbjct: 186 RKVKLVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHG 245

Query: 257 ISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQN 316
           ISIGSL +D  EAGV+NIT+ N VFS + NGVRIK W + S GF RN+LFQ+++M NVQN
Sbjct: 246 ISIGSLGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQN 305

Query: 317 PIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDV 376
           PI++DQNYCPS++GCP + SGVKI+ V Y +I GTS T+ A+ FDCS  NPC  I+L D+
Sbjct: 306 PIIVDQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDI 365

Query: 377 RLTYMNQTAQATCNNAEGIVASQVQPSTC 400
           +LT+  ++A +TC N +G+ A  V P  C
Sbjct: 366 KLTFNGRSATSTCKNIKGVKAGVVMPQGC 391

BLAST of Lsi08G002060 vs. TAIR10
Match: AT1G05660.1 (AT1G05660.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 414.8 bits (1065), Expect = 5.8e-116
Identity = 198/393 (50.38%), Postives = 274/393 (69.72%), Query Frame = 1

Query: 10  SSSLIPFIVLVTLMNLSSFGNAWS--YNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPT 69
           + S+I F +L TL+       + S  +NVVSFGAK DG TDST AF +AW  AC S    
Sbjct: 2   TKSVIRFSLLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSA 61

Query: 70  TIYVPRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTIS 129
           T+ VP+G + L+  TF GPC +   F ++ GT++AP D++  GNS  WI+F  ++  ++ 
Sbjct: 62  TVVVPKGTFLLKVITFGGPCKSKITF-QVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLV 121

Query: 130 GGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQN 189
           GG  D +    W+C+ S  G  CP G  ++ F+++K+VI+S + S+NSQ+ H+ +NGC N
Sbjct: 122 GGTFDARANGFWSCRKS--GQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTN 181

Query: 190 VMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 249
           V+++ +K++A GNSPNTDG HVQ S+ VT   S + TGDDC++IGPGT NL I  + CGP
Sbjct: 182 VVVRNVKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGP 241

Query: 250 GHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 309
           GHG+SIGSLAK+L+E GV+N+TV + VF+ +QNGVRIK+W +PSNGF R + FQ +VM N
Sbjct: 242 GHGVSIGSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKN 301

Query: 310 VQNPIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKL 369
           V+NPI+IDQNYCP+HEGCP + SGVKI+ VTY +I GTSAT+ A+K  CS  +PC GI L
Sbjct: 302 VENPIIIDQNYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITL 361

Query: 370 DDVRLTYMNQT-AQATCNNAEGIVASQVQPSTC 400
            D++LTY   T A + C NA G     +QP++C
Sbjct: 362 QDIKLTYNKGTPATSFCFNAVGKSLGVIQPTSC 391

BLAST of Lsi08G002060 vs. TAIR10
Match: AT2G43860.1 (AT2G43860.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 410.2 bits (1053), Expect = 1.4e-114
Identity = 213/393 (54.20%), Postives = 275/393 (69.97%), Query Frame = 1

Query: 10  SSSLIPFIVLV---TLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKP 69
           S  ++P  +++   TL++  +     + NV+S+GAK DG  DST+AF  AW  ACAS  P
Sbjct: 6   SCLILPLALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACASANP 65

Query: 70  TTIYVPRGRYYLQSGTFNG-PCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVT 129
           TTI VP+GR+ + +  F+G  C    I IRI G++VAP DF++I +S  WI F  +  V+
Sbjct: 66  TTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVS 125

Query: 130 ISGGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGC 189
           I GG LD +G +LW CKN+  G  CPTGA +L FS S N+ +S LTS+NSQ FHIVI+  
Sbjct: 126 IYGGILDAQGTSLWKCKNNG-GHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNS 185

Query: 190 QNVMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVC 249
            NV + G+KV A  NSPNTDG+HV+ S  V I NS+IGTGDDCISIGPG++N++I+ I C
Sbjct: 186 NNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRC 245

Query: 250 GPGHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVM 309
           GPGHGISIGSL +  +E GV N+TV N+ F  T NGVRIK WGK SN FARNI+FQHI M
Sbjct: 246 GPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINM 305

Query: 310 DNVQNPIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGI 369
             V+NPI+IDQ+YC  H+ CP + SGVK+++V Y DIHGTS TEVAV  DCS   PC GI
Sbjct: 306 KMVKNPIIIDQHYC-LHKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGI 365

Query: 370 KLDDVRLTYMNQTAQATCNNAEGIVASQVQPST 399
            +DDV L  +++ AQA+C+NA G  A+ V P T
Sbjct: 366 VMDDVNLVSVHRPAQASCDNANG-SANDVVPFT 395

BLAST of Lsi08G002060 vs. NCBI nr
Match: gi|659086083|ref|XP_008443755.1| (PREDICTED: polygalacturonase-like [Cucumis melo])

HSP 1 Score: 616.7 bits (1589), Expect = 2.9e-173
Identity = 291/394 (73.86%), Postives = 334/394 (84.77%), Query Frame = 1

Query: 7   LEKSSSLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKP 66
           L+ + SL+ FI LV L N S F    SYNVV+FG KGDG TDSTQAFQ AW+NACAST+ 
Sbjct: 6   LDNNHSLLLFIFLVGLSNWSIFVETSSYNVVNFGGKGDGTTDSTQAFQMAWANACASTEK 65

Query: 67  TTIYVPRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTI 126
            TIYVPRGRYY+++ TF+GPCNN  I  RIDGTL APSDF VIGNS AWI+FRH+DG+TI
Sbjct: 66  VTIYVPRGRYYIKNVTFSGPCNNKGIIFRIDGTLEAPSDFVVIGNSEAWILFRHVDGITI 125

Query: 127 SGGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQ 186
            GGNLDG GAALWACKNSS  T CPTGATTLEFSNSKNV+++ L SLNSQMFHI INGC+
Sbjct: 126 LGGNLDGHGAALWACKNSSYNTLCPTGATTLEFSNSKNVVINNLKSLNSQMFHITINGCK 185

Query: 187 NVMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCG 246
           NV++KGL+V AS NSPNTDG+HVQ SS+VTI+NSKIGTGDDCIS+GPG SNL IENI CG
Sbjct: 186 NVIIKGLRVSASSNSPNTDGIHVQSSSNVTIINSKIGTGDDCISVGPGISNLQIENISCG 245

Query: 247 PGHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMD 306
           PGHGISIGSL KD+ E GVQN+TVKN+VFSRT+NGVRIK WGKPSNGFA NI+FQHIVM+
Sbjct: 246 PGHGISIGSLGKDVTEIGVQNVTVKNVVFSRTKNGVRIKTWGKPSNGFATNIIFQHIVMN 305

Query: 307 NVQNPIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIK 366
           NV NPIVIDQNYCP+H+ CPGKASG+KI++VTY DIHGTS T VA+ FDCSP NPC+GIK
Sbjct: 306 NVHNPIVIDQNYCPTHKACPGKASGIKISNVTYQDIHGTSTTTVAIMFDCSPTNPCIGIK 365

Query: 367 LDDVRLTYMNQTAQATCNNAEGIVASQVQPSTCF 401
           L+++ LTY NQT +A C NA G+V  QVQP+ CF
Sbjct: 366 LENISLTYKNQTTEARCYNARGVVVGQVQPTACF 399

BLAST of Lsi08G002060 vs. NCBI nr
Match: gi|449449695|ref|XP_004142600.1| (PREDICTED: polygalacturonase-like [Cucumis sativus])

HSP 1 Score: 614.4 bits (1583), Expect = 1.4e-172
Identity = 289/393 (73.54%), Postives = 339/393 (86.26%), Query Frame = 1

Query: 7   LEKSSSLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKP 66
           L+ + SL+  I+LV L + S+F +A SYNVV FG KGDG TDSTQAFQ AW+NACASTK 
Sbjct: 6   LDNNHSLLSLILLVGLSSWSTFVDASSYNVVDFGGKGDGTTDSTQAFQTAWTNACASTKK 65

Query: 67  TTIYVPRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTI 126
            TIYVPRGRY LQ+ TF+GPC N AI  RIDG++ APSD+ VIGNSAAW+VFRH+DG+TI
Sbjct: 66  ATIYVPRGRYCLQNVTFSGPCKNKAIIFRIDGSMEAPSDYLVIGNSAAWVVFRHVDGMTI 125

Query: 127 SGGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQ 186
            GG+LDGKGAALWACKNSS    CPTGATTLEFSNSKNV+V+ L SLNSQMFH+ INGC+
Sbjct: 126 LGGSLDGKGAALWACKNSSYNALCPTGATTLEFSNSKNVVVNNLKSLNSQMFHVAINGCE 185

Query: 187 NVMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCG 246
           NVM+KGL+V AS NSPNTDG+HVQ SS+VTI+NSKIGTGDDCIS+GPG SNL I+NI CG
Sbjct: 186 NVMVKGLRVSASSNSPNTDGIHVQSSSNVTIINSKIGTGDDCISVGPGVSNLQIQNISCG 245

Query: 247 PGHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMD 306
           PGHGISIGSL KD++E GVQN+T+KN+VFSRT+NGVRIK WGKPSNGFA +I+FQHIVM+
Sbjct: 246 PGHGISIGSLGKDVKEIGVQNVTIKNVVFSRTENGVRIKTWGKPSNGFATDIVFQHIVMN 305

Query: 307 NVQNPIVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIK 366
           NV NPIVIDQNYCP+H+GCPG+ASG+KI++VTY DI GTS T+VA+ FDCSP NPC+GIK
Sbjct: 306 NVHNPIVIDQNYCPTHKGCPGQASGIKISNVTYQDIQGTSTTKVAIMFDCSPTNPCIGIK 365

Query: 367 LDDVRLTYMNQTAQATCNNAEGIVASQVQPSTC 400
           L++V LTY NQTA+A CNNA GIV  QVQP+ C
Sbjct: 366 LENVSLTYKNQTAEARCNNARGIVVGQVQPTAC 398

BLAST of Lsi08G002060 vs. NCBI nr
Match: gi|307135900|gb|ADN33764.1| (polygalacturonase [Cucumis melo subsp. melo])

HSP 1 Score: 580.5 bits (1495), Expect = 2.3e-162
Identity = 280/328 (85.37%), Postives = 301/328 (91.77%), Query Frame = 1

Query: 1   MKIVTLLEKSSSLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNA 60
           M I+   +  SS I  IVLV LMNL +FGNAWSYNVVSFG KGDGRTDSTQAFQ  WSNA
Sbjct: 1   MMIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNA 60

Query: 61  CASTKPTTIYVPRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRH 120
           C+STKP TIYVPRGRYYL+SGTFNGPC NNAIFIRIDGTLVAPSDFQVIGNS AWI FR+
Sbjct: 61  CSSTKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRN 120

Query: 121 IDGVTISGGNLDGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHI 180
           +DGVT+SGGNLDGKGA LWACKNSS+ TTCP+GATTL+FSNSKNV+VSALTSLNSQMFHI
Sbjct: 121 VDGVTVSGGNLDGKGAGLWACKNSSSSTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHI 180

Query: 181 VINGCQNVMMKGLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWI 240
           VINGCQNV M+G+KVLASGNSPNTDG+H Q+SS+V +LNSKIGTGDDCISIGPGTSNL I
Sbjct: 181 VINGCQNVTMRGIKVLASGNSPNTDGIHGQMSSNVAVLNSKIGTGDDCISIGPGTSNLRI 240

Query: 241 ENIVCGPGHGISIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILF 300
           ENIVCGPGHGISIGSLAKDLQE GVQN+TVKN+VFSRTQNGVRIKAWGKPSNGFAR ILF
Sbjct: 241 ENIVCGPGHGISIGSLAKDLQEEGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARKILF 300

Query: 301 QHIVMDNVQNPIVIDQNYCPSHEGCPGK 329
           QHIVMDNVQNPIVIDQNYCP H+GCPGK
Sbjct: 301 QHIVMDNVQNPIVIDQNYCPRHKGCPGK 328

BLAST of Lsi08G002060 vs. NCBI nr
Match: gi|255576396|ref|XP_002529090.1| (PREDICTED: polygalacturonase [Ricinus communis])

HSP 1 Score: 565.5 bits (1456), Expect = 7.6e-158
Identity = 269/388 (69.33%), Postives = 318/388 (81.96%), Query Frame = 1

Query: 12  SLIPFIVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYV 71
           S   F+ L+ L+  SS   A  YNV+S+GAK DGRTDST+AF  AW+ AC STKP TIYV
Sbjct: 7   SSFSFLALLILLFTSSLATAAQYNVLSYGAKPDGRTDSTKAFLAAWTQACGSTKPPTIYV 66

Query: 72  PRGRYYLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGNL 131
           P G+++L+  +F GPC NNAI  RIDGTLVAPSD++VIGN+  W+ F+H++GVTISGG L
Sbjct: 67  PSGKFFLKDLSFGGPCKNNAILFRIDGTLVAPSDYKVIGNAGYWLYFQHVNGVTISGGIL 126

Query: 132 DGKGAALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMK 191
           DG+G+ LWACK S  G  CP+GAT+L FSNSKN+ ++ LTS NSQMFHIVINGCQNV ++
Sbjct: 127 DGQGSGLWACKAS--GKNCPSGATSLGFSNSKNIAINGLTSQNSQMFHIVINGCQNVKVQ 186

Query: 192 GLKVLASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGI 251
           G+ V ASG+SPNTDG+HVQ S  VTILNSKI TGDDCISIGPG +NLWIENI CGPGHGI
Sbjct: 187 GVTVSASGDSPNTDGIHVQQSGGVTILNSKIRTGDDCISIGPGATNLWIENIACGPGHGI 246

Query: 252 SIGSLAKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNP 311
           SIGSL KDLQEAGVQN+TVK + F+ TQNGVRIK+WG+PS+GFARNILFQH +M NVQNP
Sbjct: 247 SIGSLGKDLQEAGVQNVTVKTVTFTGTQNGVRIKSWGRPSSGFARNILFQHAIMTNVQNP 306

Query: 312 IVIDQNYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVR 371
           IVIDQNYCP ++ CPG+ SGVKI+ VTY DIHGTSATEVAVKFDCS   PC GIKL+DV+
Sbjct: 307 IVIDQNYCPDNKNCPGQESGVKISGVTYQDIHGTSATEVAVKFDCSKKEPCTGIKLEDVK 366

Query: 372 LTYMNQTAQATCNNAEGIVASQVQPSTC 400
           LTY NQ A A+CNNA+G  +  VQPS+C
Sbjct: 367 LTYKNQPADASCNNADGTASGFVQPSSC 392

BLAST of Lsi08G002060 vs. NCBI nr
Match: gi|568880467|ref|XP_006493140.1| (PREDICTED: polygalacturonase-like [Citrus sinensis])

HSP 1 Score: 559.3 bits (1440), Expect = 5.4e-156
Identity = 260/383 (67.89%), Postives = 316/383 (82.51%), Query Frame = 1

Query: 17  IVLVTLMNLSSFGNAWSYNVVSFGAKGDGRTDSTQAFQRAWSNACASTKPTTIYVPRGRY 76
           I+L+++ N SS     SYNVVSFGAK DGRTDST+AF  AW+NAC S +  TIYVP GR+
Sbjct: 14  ILLLSIFNTSSLAAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRF 73

Query: 77  YLQSGTFNGPCNNNAIFIRIDGTLVAPSDFQVIGNSAAWIVFRHIDGVTISGGNLDGKGA 136
           +L++  F GPC NN I IRIDGTLVAPSD++VIGN+  W+ F+H+DGVT++ G LDG+G 
Sbjct: 74  FLRNVAFQGPCKNNRITIRIDGTLVAPSDYRVIGNAGNWLFFQHVDGVTLNSGILDGQGT 133

Query: 137 ALWACKNSSTGTTCPTGATTLEFSNSKNVIVSALTSLNSQMFHIVINGCQNVMMKGLKVL 196
           ALWACKNS  G  CP+GAT++ FSN  N+ ++ LTSLNSQM+H+V NGC NV +KG+KVL
Sbjct: 134 ALWACKNS--GKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVL 193

Query: 197 ASGNSPNTDGVHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSL 256
           ASGNSPNTDG+HVQLSSDVTILN++I TGDDC+SIGPGTSNLWIEN+ CGPGHGISIGSL
Sbjct: 194 ASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSL 253

Query: 257 AKDLQEAGVQNITVKNIVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQ 316
            KDL EAGVQN+TVK + F+ TQNG+RIK+WG+PSNGFARNILFQ+ +M NVQNPI+IDQ
Sbjct: 254 GKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFQNAIMKNVQNPIIIDQ 313

Query: 317 NYCPSHEGCPGKASGVKINDVTYHDIHGTSATEVAVKFDCSPINPCVGIKLDDVRLTYMN 376
           NYCP + GCPG+ SGVKI+DVTY D+HGTSATEVAV FDCS   PC  I+L+DV+LTY N
Sbjct: 314 NYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDCSSKYPCSRIRLEDVKLTYKN 373

Query: 377 QTAQATCNNAEGIVASQVQPSTC 400
           Q A A+C++A+G  +  VQP  C
Sbjct: 374 QPAAASCSHADGSASGLVQPKGC 394

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PGLR_PRUPE3.6e-15265.98Polygalacturonase OS=Prunus persica PE=2 SV=1[more]
PGLR6_ARATH2.6e-11354.20Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 S... [more]
PGLR2_PLAAC8.9e-8242.78Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1[more]
PGLR2_ARATH4.3e-7640.65Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=2 SV=... [more]
ADPG2_ARATH9.5e-7643.48Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LY60_CUCSA9.9e-17373.54Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662770 PE=3 SV=1[more]
E5GBC3_CUCME1.6e-16285.37Polygalacturonase OS=Cucumis melo subsp. melo PE=3 SV=1[more]
B9SSX1_RICCO5.3e-15869.33Polygalacturonase, putative OS=Ricinus communis GN=RCOM_1267820 PE=3 SV=1[more]
S5MMR8_9ROSA1.1e-15567.93Polygalacturonase 2 OS=Pyrus x bretschneideri GN=PG2 PE=2 SV=1[more]
A0A067EKY6_CITSI1.1e-15567.62Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041993mg PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G43870.11.1e-14162.30 Pectin lyase-like superfamily protein[more]
AT3G59850.19.0e-14161.03 Pectin lyase-like superfamily protein[more]
AT2G43890.14.3e-11953.21 Pectin lyase-like superfamily protein[more]
AT1G05660.15.8e-11650.38 Pectin lyase-like superfamily protein[more]
AT2G43860.11.4e-11454.20 Pectin lyase-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659086083|ref|XP_008443755.1|2.9e-17373.86PREDICTED: polygalacturonase-like [Cucumis melo][more]
gi|449449695|ref|XP_004142600.1|1.4e-17273.54PREDICTED: polygalacturonase-like [Cucumis sativus][more]
gi|307135900|gb|ADN33764.1|2.3e-16285.37polygalacturonase [Cucumis melo subsp. melo][more]
gi|255576396|ref|XP_002529090.1|7.6e-15869.33PREDICTED: polygalacturonase [Ricinus communis][more]
gi|568880467|ref|XP_006493140.1|5.4e-15667.89PREDICTED: polygalacturonase-like [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
IPR006626PbH1
IPR000743Glyco_hydro_28
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0047911 galacturan 1,4-alpha-galacturonidase activity
molecular_function GO:0004650 polygalacturonase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G002060.1Lsi08G002060.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 61..387
score: 3.5
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 242..255
scor
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 329..369
score: 7200.0coord: 212..233
score: 730.0coord: 265..286
score: 11.0coord: 235..255
score: 1100.0coord: 185..211
score: 3100.0coord: 295..316
score: 39
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 18..400
score: 6.6E
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 27..399
score: 1.0E
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 10..400
score: 5.3E
NoneNo IPR availablePANTHERPTHR31375:SF2POLYGALACTURONASE/PECTINASEcoord: 10..400
score: 5.3E

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None