Lsi03G013790 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G013790
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr03 : 24743732 .. 24747009 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACAAGTATTCTATCATGAGTTTGTTATTTTTTTTTTGTTGCAACTTCTAGCTCCAGTGCTAAAACCATTTCCAAGTGAAATGAAATTTAATATTTGAGTGTACTTAAAAAAATATATATATTGAAAAATTATTTTAAATAATAAAATGCTAAAAATCTTTACAAATATAATAAAATTTCACTGTCTATTTGCGATAGATACAAATAGTAGTCTATCTGATAAAATTTTACTATATTTATAAATATTTTGGTTTATTTTCCTATATTTAAAAAACATCCTAAAATATTTGTGACAAAGGAAAAAAAGATTTAGTGGAAACAAGTAATAAAATTTTCTTAACCATAATCCCTTTCTCTCTTATTCCTTTTTAATTATTGTTAATTGTTTTATTATTTTAATATGTATTATTAAAAATATAAAGTTAAAAAATTATCATATCTTATAATAAACTTCATATTAAATATCAATTTAAAATAATCGAAATAATATGTCTCTAAATTGCAACAATATAGTATTAATTTTTCAAATACCATATATATTGTTTAAAGTTTAAATTTAAATTTTAAAATTTACAAACATTATTTTTACTTCATGTCACAACTTATTTTTCCATGTTGAATATTTATTTTAAAAACTACAATAATATATTTTAACTTTTATTGTTAAGAGTTTAATGATTGAAAAATAATATGTTTTTTTTTTCTTACGATTAGCCTCTCCTTATAGTTAGGATGGAGATGAGAAGTCTAGCCATACCTCGATGATCTCTTTGCATCGAGGGAGGTTGACAAATGAGTGCACCTACTTTTTTTAATGGGTAGGTAAGAGTTCGTTTTGTGAGGTGTAACCAAGGACTGAAATATTTGTCGTGACATAGATATATTTATAAGTTAGAGAGTTCGACATCAATATTAAAGATTAGTTGATATCTTTTATATCTTTTATAAGTAATCATAAAAGATAGAAAATATCATCTATAAATCCTGATATGAAGATATATACACTGACAACAGTATCTATAACTTAATTAGTTTATGTTAGTAAAAATATTTTAATTGTTATATATATATATATACGTCGTAAAATTAAAATACTAGTTTTGATATCGACATTGATATTTTAATTCTTAAGTACTGTAACTCAAGAAACCAATTTTCAGTTATGGTAGGCGCGACACTCTCATTGACTAGTTACTATCAATAGACAATCTAAAGGTGGAATGGAAAATCTAAGTCCAAGAATCCAATGAGGTAATGATGAGTCTCTTTCTTATAAATAGACCATTCTATTTCTAACTCCATTATTGAAGAAGAAAAGCATACTCTATAGTTTGGTTTACACAAGCCTTTGATTTGATTTAAAGTATTATCGCGAAGATCAAGTGTCAAAACGAGCACTTACACACTAATGTGCATTTCTTTCGCTCTTAAAAATATTTTTCTTTCTCCTCTTTCTCTCTTAGTCTTCATTCACTCGAACAGTACTACCGTTGTGGAACAAAGTCAACTCGTGTTGTTTTTCAATCAAAATCATCATCAATGATCAGACTTAACAATAGTATAGTAAGGTTTGTAATAGAATCTTCACACAATTTTTTTTTTTGTCATGTACTTAATTTTTGAAAAATGGTTATGAATGTAGGAACTATTTTAATATATGTGTATGCATTTTAAACGTAGTTACAAGTTTAGTATTTAAAAAAAAAATATTTACACATATAGTATTCTTCTTAGAATCTTATAAATCATCAACTTATTCTAACTTTTATTATTTTATGTGACAATATCTTTAAAAATCATGAATATATATTAAACCTTTACTAAAGTAATAATTGTTTTCCTTTTTTTTTTTTCTTTCGATTTACAACTATACTCCTACCTTTTTTTAAGGTATTTATAATGAAATAATATTATTAAAATGATAAACTTTATCTAATAGATACAAAAATCATGCTCTACCTATTCTTTCAAGATTAGATGTTTTCTCATATTCACTCATTTCTACTCGGAATACATAACTTTTCCTTATTTATTAATATTAAGCTTCCCATGTTTTGCTTTGAAACTTTGTCATAGCCTCAAAAAGTTCAATCGAAATTTTAGTTCTAGAACGGAATATGATTACTACATACCTACTGTTACCTTGGAGAGGGGGCTTTTCTCGTGAAATCGAAGACAAGATATACCAGGATATTATACAATAATAGGCACAATCATTAGGTGCAACCTAGGTTATATCCAATCTCATGCTTCTCTTTCCTTTACACACAATAAAAATAAAAAAAAATCATCTAAAAAAATTGTCATATGATAATTTTCTATTGGATAATTGTTTGGGCTAAATAAAGATAGATGCAGCTCAAGCAACACTCAAGTATTTTCCACAGTAATGGTTCTTTGTGCTTAGCATTTTATTCCCCTTTATCAGAGAAGATTCTGTCAAAAAAAATTCTATGAATTCCCCTTTTTAAATAGGGCCTTTATCTTAGTTCTCTGTTTATTGAGATTTATTTTATATAGTTATGTCAATGTGATGTTTTTGATGAACCTATTGATTGTATTTTTATAACATAAATTATTGTCGCACAAAACATATTTTCTTGATCTAACAAGGCAAGACCAAAATCATAGGCCAGCTTTGTTTCTTTAAGCGAATTATTTGTTTATTCAATTTTTTTTAAGGAAGCGGAGAAAAATAAAACAAGAGATCACCAATGAGCAAACACCACAACATCAATCCCTCTCAAGAAGAAGGGACAAGATAACCGGAGAAAAACCTCTTTCGAAGACCAGACAACCTAGATGGAATTTCATCATCTTTAATTCTAAGTGGCCATATAACATGTCAGTGTGGAAATAGCATGATTTATTGTGCTTGGAGGGAGGATAGTTTTTTCATGTGGTCGAGTGGGTGGTTCATCTTTAGATCGATGATCTAAGGAGATGTTTATATTAGACGTATTTTTATTAAAAATACGTATGATTAATAATATGAGCTATGTATGCAGATTAGTATTTTCTCACATTGGATTATTTTAAGGCCTATAAATCCTAATTGAGTAGGGACTTAATGGATAGAAACCTATTCCTAGATTAATTAGAGTTTAATGGGAACTCTAATTGAACTAGTATATAAAGAGACCTTATGACTATGGTCCCCAACACATCGAAACAACAAGCACTCAGTCTTTCATGAATCCTATCTAAAGAGAGATCCCACTAAGGTATTCAGAGTTTTGGTTGAAGAAGACTATAGTCATCTAAAGCTATCCGGT

mRNA sequence

ATGTACAAGAAGCGGAGAAAAATAAAACAAGAGATCACCAATGAGCAAACACCACAACATCAATCCCTCTCAAGAAGAAGGGACAAGATAACCGGAGAAAAACCTCTTTCGAAGACCAGACAACCTAGATGGAATTTCATCATCTTTAATTCTAAGTGGCCATATAACATGTCAGTGTGGAAATAGCATGATTTATTGTGCTTGGAGGGAGGATAGTTTTTTCATGTGGTCGAGTGGGTGGTTCATCTTTAGATCGATGATCTAAGGAGATGTTTATATTAGACGTATTTTTATTAAAAATACGTATGATTAATAATATGAGCTATGTATGCAGATTAGTATTTTCTCACATTGGATTATTTTAAGGCCTATAAATCCTAATTGAGTAGGGACTTAATGGATAGAAACCTATTCCTAGATTAATTAGAGTTTAATGGGAACTCTAATTGAACTAGTATATAAAGAGACCTTATGACTATGGTCCCCAACACATCGAAACAACAAGCACTCAGTCTTTCATGAATCCTATCTAAAGAGAGATCCCACTAAGGTATTCAGAGTTTTGGTTGAAGAAGACTATAGTCATCTAAAGCTATCCGGT

Coding sequence (CDS)

ATGTACAAGAAGCGGAGAAAAATAAAACAAGAGATCACCAATGAGCAAACACCACAACATCAATCCCTCTCAAGAAGAAGGGACAAGATAACCGGAGAAAAACCTCTTTCGAAGACCAGACAACCTAGATGGAATTTCATCATCTTTAATTCTAAGTGGCCATATAACATGTCAGTGTGGAAATAG

Protein sequence

MYKKRRKIKQEITNEQTPQHQSLSRRRDKITGEKPLSKTRQPRWNFIIFNSKWPYNMSVWK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G013790.1Lsi03G013790.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G013790Cucurbita moschata (Rifu)cmolsiB266
Lsi03G013790Cucurbita moschata (Rifu)cmolsiB647
Lsi03G013790Cucurbita pepo (Zucchini)cpelsiB342
Lsi03G013790Cucurbita pepo (Zucchini)cpelsiB503
Lsi03G013790Cucurbita pepo (Zucchini)cpelsiB545
Lsi03G013790Wild cucumber (PI 183967)cpilsiB184
Lsi03G013790Wild cucumber (PI 183967)cpilsiB358
Lsi03G013790Cucumber (Chinese Long) v2culsiB045
Lsi03G013790Cucumber (Chinese Long) v2culsiB186
Lsi03G013790Cucumber (Chinese Long) v2culsiB354
Lsi03G013790Melon (DHL92) v3.5.1lsimeB234
Lsi03G013790Melon (DHL92) v3.5.1lsimeB255
Lsi03G013790Melon (DHL92) v3.5.1lsimeB260
Lsi03G013790Watermelon (Charleston Gray)lsiwcgB216
Lsi03G013790Watermelon (Charleston Gray)lsiwcgB219
Lsi03G013790Watermelon (Charleston Gray)lsiwcgB232
Lsi03G013790Watermelon (Charleston Gray)lsiwcgB247
Lsi03G013790Watermelon (97103) v1lsiwmB238
Lsi03G013790Watermelon (97103) v1lsiwmB240
Lsi03G013790Watermelon (97103) v1lsiwmB281
Lsi03G013790Watermelon (97103) v1lsiwmB259
Lsi03G013790Cucumber (Gy14) v2cgyblsiB171
Lsi03G013790Cucumber (Gy14) v2cgyblsiB327
Lsi03G013790Melon (DHL92) v3.6.1lsimedB244
Lsi03G013790Melon (DHL92) v3.6.1lsimedB268
Lsi03G013790Melon (DHL92) v3.6.1lsimedB273
Lsi03G013790Silver-seed gourdcarlsiB237
Lsi03G013790Silver-seed gourdcarlsiB332
Lsi03G013790Silver-seed gourdcarlsiB394
Lsi03G013790Silver-seed gourdcarlsiB626
Lsi03G013790Cucumber (Chinese Long) v3cuclsiB049
Lsi03G013790Cucumber (Chinese Long) v3cuclsiB055
Lsi03G013790Cucumber (Chinese Long) v3cuclsiB203
Lsi03G013790Cucumber (Chinese Long) v3cuclsiB380
Lsi03G013790Watermelon (97103) v2lsiwmbB218
Lsi03G013790Watermelon (97103) v2lsiwmbB252
Lsi03G013790Wax gourdlsiwgoB292
Lsi03G013790Wax gourdlsiwgoB313
Lsi03G013790Bottle gourd (USVL1VR-Ls)lsilsiB093
Lsi03G013790Bottle gourd (USVL1VR-Ls)lsilsiB096
Lsi03G013790Cucumber (Gy14) v1cgylsiB319
Lsi03G013790Cucumber (Gy14) v1cgylsiB551
Lsi03G013790Cucurbita maxima (Rimu)cmalsiB118
Lsi03G013790Cucurbita maxima (Rimu)cmalsiB213
Lsi03G013790Cucurbita maxima (Rimu)cmalsiB242
Lsi03G013790Cucurbita maxima (Rimu)cmalsiB277
Lsi03G013790Cucurbita maxima (Rimu)cmalsiB658
Lsi03G013790Cucurbita moschata (Rifu)cmolsiB230
Lsi03G013790Cucurbita moschata (Rifu)cmolsiB105