Lsi03G009130 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G009130
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description60S ribosomal protein L7-1
Locationchr03 : 17045556 .. 17049773 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAGTAGAGTTTTCAGCTCATTTTTTGCTAAGGCTAATGAGAGTATTCTAAGGAAGCTACAAAGTCTTATATTAGCTCCTTCATTAGATTTCACACTTTTCTTGTTAATGATTTTACTGGAATTATAGTTGAATTTCAGATACCTGAATCTTAAAAATGTGAGGGAGCTCGTCTATAAGAAGGGATTCACAAAGATCGACAAACAAAGATTAGTTCCTCTGACCGATTACAACATCATTGAACAGGTATCGAAAAACGATCTTAACGACTTTACTATCATTAATCTGTTTCACTTTCTACTAATTTGATGGTAAATTTCAGGCATTAGGCAAGCATGACACATGTACAGGAAGGATATGGTGCATGAAATTGCTAGTGTTCAAGGTCAGGTTTAGTATAGGCCTAGCCCCTCTCAACTTTATGCTCTTTATATATATACATAAAATCGATACCATTAGCTAGCCCAGTAGTAAATTTGTCTTCCAGCCCTCTCTAGACCTAGGTTTAAGCCTCACTCTTTACATTTATTTTTTAGATTATTCGTCTATAAGAAGCTATTCACAAAGATTGACAAACAAAGAGTTTCTCTGACCGATTACAGCATCATCGAACATGTATTGGAAAAACGATCTTAACTACAACATCATGGAGGATATGGTGCATGAAATTGCTACTGTTGGTCCTCATTTTAAGGAGGTAATTTACTTTTTATGGCCTGTTGAACTTGACAAGCCAGAAGGAGGAGGGAGCCTTCAAGGGAAAAAGTCATTATACAAGGAGGGTGGAGATGTTGGTAATAGAGAGGATGATATCAATGATCTGATTAATGAGGTGAATTAGGCTGAAAACATTTGCTTTGAAATTAGATTTTGAAGAGCCTAAAGGGATTAGTAGTTTTTGTAATGCAATTTTGTAGCTATAATGAGTTTGTATCTTGTTCAACTTATTTGCTTCTTTTGTTTTGTTTTCATGATATTTCTTATGTCCAAAATAAATAAATAAATTGGATCTACTATATATTTAACATATTACCATCCACATTATTAGAGAAGAAAGCCATCCCCTTGTTTCATTTTCCTTTATAATATTTCATTATTGAAGTAGATATATGAGATTTGTTATATTTAAGGATTTAAAACGTTAATTGTTCATTTAAAAAATTTTAGAAATTGATCTACTCGATCTAATCGAGCTTGAGTTTGGCTCAACCGGCTAAAACATGTAGCAAGACGTCATAAGTTTAAATCCTCTCTTACATGTTGTTGAACTTAAAAAAAGCATATATCTTAAATTTAGTCACTCCTATTTGAAAAATAGCTATCATGTACCATCTGAATTACACATCTTCAAGGCCAACATCAAAAGTATTGGAAAATCCATGAATAACCATCCACATTGAGTTGAAAAACATTAAATCACAAGTGGAGACTAATTTATCATATACTTCGAATAATTAAATCATATTTAAAAGCAGGATGAGACAAAAAATGACCTAAGTTAGTATTGTTCTTATCATTCCAAATCACCTAATAAGTTACACAATAAATAAAGCGGATGCACTAAGTTGATCCATCCAAATAATCTTACAATCAAATATTTAAAATATGTTTATGTCTAGGAAGCTACAAACTAAGAACTATTGACTTCTAAATCGATTTTATTCGAAAGCAAAAAAAAATGAAAGACTACTCAATCGACTCTTCCTTTGACAAAAAAAAATTGGCCATAAGGTAAGACAATCTACCCCTTTACTCTACATACAAACTTTGGTAGGGAGAGTATTCATACATAAAAGAATGAATATATTTAAATAAACCACAATGGTTTTAAAGAGCTAATTTGTATATAACCTTTAACATGCATAAGACCCATTTTTAGAGAGATGCAAAAACCATAGTAAGACTTGCTAAGAAAACTTCAATCTTAATGTTTAAAAGTATAATTTCTAAAATCGATTAATATAAAATCATCCATTCTACATATCTACATCATCACTTTATTATTTTTACTATTGAAAATATACTAACTTATTAAAATTTAAAATTTTGGATCAAAATTATGTGATCCAAAATTGAAGAGTTACATATTTTTCTCATTATTCTTTAGCTTCTATTCCATTCGATGAAGAACCAAGTTGCTATTTATAGGTTAGCAACTTAGTAACTCTCCAAAATACAAAATAAAATCAAATAAATAAAAGAAATTCAAACATTTGTCAAATTTAACTCAATTTAGTTGTTACTTGACCAAAATCAAACCTATCTCATTCAAATTGAAGAAACTACAAATTTAACTTTCATATATGTTAAGTTTGAACGTGAAATATCATCTTAATTTGATGGTTTCAATTCAATTTGAAGTTTCTAACAATGAATTTAATCTATACAATTAAATCAATTTTTATGTTTCAATATTCAATTGTTTCACTTTCTTTTAGTATATATATCCGATAAAAAAAGTTTTTGGATATAAAAAAAATGTAACATATAGAATACGTAAATATAAAACAATTAATAAACTTCTAAACTTGGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTTGCAGACCTGCATGGGCCATTATTTTTTTTGGTATCGTTTTATGTTGAGCGTAGTTGCTTTACATGTCTGGCAAGTCCTTGAGCACCTGAGCTCAGATTTTGTGGTGTGATAGGCTTTCGATAATTGCTATTCATATTGTTTAGGATTCATGAAAATGTATGCATGCTTTTAGGCCAAATTTAAAAATGTCCTTAATTCCCTTGCATTTTTTTAGCACATAGTTATCTTACCTAGGGTCTTGAAGGCTTAGGATTGAGTTATTTGGTCAATATGCTTGTTGTCGTTGTAGGATTGGTATGACAATCCTAGAGAGGGTTGAGCAAGGTTTCTTCAAACTAATTAAATCTTTTTCCTAAAGTGGGCCAATTAAACAAATTAATACACTTTATACTAACAAGTAAGTTAAACAAAGATTCAATCCAAAATAACCCACTTTTAAGCACCCTATTTAATGCTAATAATAAGATTGGTAAAGAATATATAAAATTAAGAGTTACCAATCAAAATAAACCAATTTGAGCAATTAATTTCAAGAATAAAAATTGCAATTAATTTCAAGCAATAAACTACAATAACAAATTAATTGCAAAATTAAATAGAAGATTGATAGAGAAAATGACACCATAAATTTATAGTGGTTTGGCACAATCGACCTACATCTACTTCCCAAGCTCCTCTTAGGTATGTCGCTCAAATTTGACTCTTTCCACGGCTTAGAGTCGAACCACTACAACGTTCCTTTTTTGGGCTCAAGAAAAAACTCGATCTTTCCACGATTGAGGATCAAAATGTTACAACTCTTTTCGCAGGATCAAGAGTAACCCTTACAAAAGTTTGAAAAAATAACGAGCACACTTGACAAACTCTCTAAAAAAGTAGATTTACAAATTTTAAGCTCACAACAAATCAATCTTCAAAATAAATAAATCTCTCTCAAGAATTAGATGTAAAGAAAAAATAATGAAGCTTGGAGAGAGCAAAAATGGTGGTTTTGAGGATTGAAAAAATGTGCAATTGTTATAGAAATTTGGTGAAGAAGATGAATTTAAAAAGAGGGAAACGTAGATGAAAACCACATTTAATTTGGACCTTTAGATTGAAGGAAAAGAAAAATGAAGAGACTAAAAAGGAAAAAGGAAATTAAAATTAAATATGTAAATATTTGTGTGTGTGACTAACGACCAAATTGACATTTAATGAATCTGATATTTTTTTTTTAAAAAAATTAAGCATGTTATCATTAAGTACCACAATTCAAATTGTTTTAGAAAGCTCCCCCGGGATCGAAATCTGATCTCTCACTTCCCACGATCTAATTTTCTTTGTTGAAGCTAGTCTACATTCAGCCCTTGGAATTTCCTTTTTGTATATATTTCTGCTACTGTCACGATTGAGATTCTAACCTCTTATCTAGCAATGCAATGGGGACTACAATAGACCGATGCTAAGTAAAGCAATGGTACCCGAAGACTCAAATGAAGAGCTATCGATGAAAGATCCCGCCCATTTTTGGTTTTCTTCGAACCAATGGGAGACTTGCATCTCCGGCGACTCAGATATGGGACTTCCGTCAAAGCTTCATAGTTGTATCAAAGGTGAAATAGACCAACCTATCAACTTAAGAGGGAACGAAGACACC

mRNA sequence

ATAAGTAGAGTTTTCAGCTCATTTTTTGCTAAGGCTAATGAGAGTATTCTAAGGAAGCTACAAAGTCTTATATTAGCTCCTTCATTAGATTTCACACTTTTCTTATACCTGAATCTTAAAAATGTGAGGGAGCTCGTCTATAAGAAGGGATTCACAAAGATCGACAAACAAAGATTAGTTCCTCTGACCGATTACAACATCATTGAACAGGATATGGTGCATGAAATTGCTACTGTTGGTCCTCATTTTAAGGAGGTAATTTACTTTTTATGGCCTGTTGAACTTGACAAGCCAGAAGGAGGAGGGAGCCTTCAAGGGAAAAAGTCATTATACAAGGAGGGTGGAGATGTTGGTAATAGAGAGGATGATATCAATGATCTGATTAATGAGCAATGCAATGGGGACTACAATAGACCGATGCTAAGTAAAGCAATGGTACCCGAAGACTCAAATGAAGAGCTATCGATGAAAGATCCCGCCCATTTTTGGTTTTCTTCGAACCAATGGGAGACTTGCATCTCCGGCGACTCAGATATGGGACTTCCGTCAAAGCTTCATAGTTGTATCAAAGGTGAAATAGACCAACCTATCAACTTAAGAGGGAACGAAGACACC

Coding sequence (CDS)

ATAAGTAGAGTTTTCAGCTCATTTTTTGCTAAGGCTAATGAGAGTATTCTAAGGAAGCTACAAAGTCTTATATTAGCTCCTTCATTAGATTTCACACTTTTCTTATACCTGAATCTTAAAAATGTGAGGGAGCTCGTCTATAAGAAGGGATTCACAAAGATCGACAAACAAAGATTAGTTCCTCTGACCGATTACAACATCATTGAACAGGATATGGTGCATGAAATTGCTACTGTTGGTCCTCATTTTAAGGAGGTAATTTACTTTTTATGGCCTGTTGAACTTGACAAGCCAGAAGGAGGAGGGAGCCTTCAAGGGAAAAAGTCATTATACAAGGAGGGTGGAGATGTTGGTAATAGAGAGGATGATATCAATGATCTGATTAATGAGCAATGCAATGGGGACTACAATAGACCGATGCTAAGTAAAGCAATGGTACCCGAAGACTCAAATGAAGAGCTATCGATGAAAGATCCCGCCCATTTTTGGTTTTCTTCGAACCAATGGGAGACTTGCATCTCCGGCGACTCAGATATGGGACTTCCGTCAAAGCTTCATAGTTGTATCAAAGGTGAAATAGACCAACCTATCAACTTAAGAGGGAACGAAGACACC

Protein sequence

ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEQCNGDYNRPMLSKAMVPEDSNEELSMKDPAHFWFSSNQWETCISGDSDMGLPSKLHSCIKGEIDQPINLRGNEDT
Homology
[Close]
BLAST of Lsi03G009130 vs. Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21
Identity = 58/139 (41.73%), Postives = 88/139 (63.31%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F+  F K N++ +  L+ +       +  + + NLK+V+EL+YK+G+ K++ QR+ 
Sbjct: 108 LRQIFNGVFLKVNKATMNMLRRVE-----PYVTYGFPNLKSVKELIYKRGYGKLNHQRIA 167

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
            LTD +I+EQ           D++HEI TVGPHFKE   FLWP +L  P GG  L+ K++
Sbjct: 168 -LTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGG--LKKKRN 227

Query: 121 LYKEGGDVGNREDDINDLI 129
            Y EGGD GNRE+ IN+LI
Sbjct: 228 HYVEGGDAGNRENFINELI 238

[Close]
BLAST of Lsi03G009130 vs. Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-21
Identity = 57/139 (41.01%), Postives = 88/139 (63.31%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+G+ K++ QR+ 
Sbjct: 108 LRQIFNGVFLKVNKATVNMLRRVE-----PYVTYGYPNLKSVKELIYKRGYGKLNHQRIA 167

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
            LTD +I++Q           D++HEI TVGPHFKE   FLWP +L  P GG  L+ K++
Sbjct: 168 -LTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGG--LKKKRN 227

Query: 121 LYKEGGDVGNREDDINDLI 129
            Y EGGD GNRE+ IN+L+
Sbjct: 228 HYVEGGDAGNRENFINELV 238

[Close]
BLAST of Lsi03G009130 vs. Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-21
Identity = 57/139 (41.01%), Postives = 87/139 (62.59%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+GF K++ QR  
Sbjct: 110 LRQIFNGVFLKVNKATINMLRRVE-----PYVTYGYPNLKSVKELIYKRGFGKLNHQRTA 169

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
            LTD +I++Q           D++HEI TVGPHFKE   FLWP +L  P GG  ++ K++
Sbjct: 170 -LTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGG--MKKKRN 229

Query: 121 LYKEGGDVGNREDDINDLI 129
            Y EGGD GNRE+ IN+L+
Sbjct: 230 HYVEGGDAGNRENFINELV 240

[Close]
BLAST of Lsi03G009130 vs. Swiss-Prot
Match: RL71_ARATH (60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-21
Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           +  VF+  FAKA +S+ +KL  L + P   +  + Y N K+V++L+YKKG T I+    V
Sbjct: 112 LKSVFTGVFAKATDSLFQKL--LKVQP---YVTYGYPNDKSVKDLIYKKGCTIIEGNP-V 171

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           D+V+EIA VG HF+EV+ FL P++L+KP     L  KK 
Sbjct: 172 PLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPV-ADVLHRKKQ 231

Query: 121 LYKEGGDVGNREDDINDLINE 131
           ++ EGGD GNRED INDLI++
Sbjct: 232 VFSEGGDTGNREDKINDLISK 245

[Close]
BLAST of Lsi03G009130 vs. Swiss-Prot
Match: RL7_CAEEL (60S ribosomal protein L7 OS=Caenorhabditis elegans GN=rpl-7 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.5e-20
Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++ +  F K N++ L  L+  I+ P   +  + Y N K + +L+YK+G+ K+D  R V
Sbjct: 110 LRQINNGVFVKLNKATLPLLR--IIEP---YVAWGYPNNKTIHDLLYKRGYAKVDGNR-V 169

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           P+TD  I+EQ           D+ HEIATVGPHFKE   FLWP +L+ P GG +   K +
Sbjct: 170 PITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEATNFLWPFKLNNPTGGWTK--KTN 229

Query: 121 LYKEGGDVGNREDDINDLINE 131
            + EGGD GNRED IN+L+ +
Sbjct: 230 HFVEGGDFGNREDQINNLLRK 242

[Close]
BLAST of Lsi03G009130 vs. TrEMBL
Match: D7U871_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0070g00130 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.1e-29
Identity = 78/141 (55.32%), Postives = 92/141 (65.25%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F     KANE IL  LQ +       +  + Y NLKNVREL+YKKGF KI+ Q+ V
Sbjct: 112 LRKIFDGVLVKANEGILEMLQKVE-----PYVAYGYPNLKNVRELIYKKGFAKIEGQK-V 171

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           D+VHEIA VGPHFKEV  FLWP  L+KPEGG   QGKK 
Sbjct: 172 PLTDNNIIEQALGKHGIMCIEDIVHEIANVGPHFKEVNSFLWPFTLNKPEGG--FQGKKK 231

Query: 121 LYKEGGDVGNREDDINDLINE 131
           L+KEGGD GNR D IN+LI +
Sbjct: 232 LFKEGGDAGNRGDKINELIGK 244

[Close]
BLAST of Lsi03G009130 vs. TrEMBL
Match: A0A061FT16_THECC (Ribosomal protein L30/L7 family protein isoform 1 OS=Theobroma cacao GN=TCM_045247 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-28
Identity = 75/141 (53.19%), Postives = 95/141 (67.38%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + RVFS  F KA E ++  LQ +       +  + Y NLKNV+EL+YKKG+ +IDK + V
Sbjct: 116 LRRVFSGIFVKATEGVIEMLQKVE-----PYVTYGYPNLKNVKELIYKKGYARIDK-KAV 175

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           D+VHEIA VGPHFKEV +F+ P+ L KP  GG +QGKK 
Sbjct: 176 PLTDNNIIEQELGKYGIICLEDIVHEIANVGPHFKEVNHFMGPLMLSKP--GGVIQGKKQ 235

Query: 121 LYKEGGDVGNREDDINDLINE 131
            Y+EGGD GNRED+INDLI++
Sbjct: 236 PYREGGDAGNREDEINDLISK 248

[Close]
BLAST of Lsi03G009130 vs. TrEMBL
Match: M5WTB4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010527mg PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.4e-28
Identity = 75/141 (53.19%), Postives = 99/141 (70.21%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F++ F KA+++I+ KL  L + P + +    Y NLKNVREL+YKKGF KIDK++ V
Sbjct: 112 LRKIFNAVFVKASDAIIEKL--LRVQPYVSYG---YPNLKNVRELIYKKGFAKIDKKK-V 171

Query: 61  PLTDYNIIEQDM-----------VHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD N+IEQ+M           VHEIAT+GPHFKEV  FLWP  L+KPE G  L+G K 
Sbjct: 172 PLTDNNLIEQEMGKHDIICIEDIVHEIATIGPHFKEVTSFLWPFVLNKPEVG--LKGSKM 231

Query: 121 LYKEGGDVGNREDDINDLINE 131
            YK GGD G+RED IN+LI++
Sbjct: 232 AYKNGGDAGDREDKINELISK 244

[Close]
BLAST of Lsi03G009130 vs. TrEMBL
Match: A0A151TA08_CAJCA (60S ribosomal protein L7-1 OS=Cajanus cajan GN=KK1_018475 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.0e-27
Identity = 70/141 (49.65%), Postives = 96/141 (68.09%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++FS+ F K +E I+ KLQ +       +  + Y NLK+++EL+YKKG  ++D+++ V
Sbjct: 103 LRKIFSAVFVKPSEGIMAKLQRVE-----PYVTYGYPNLKSIKELIYKKGLARLDRRK-V 162

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           DMVH+I  VGPHFKEV+ F+WP EL KP  G  L+G K+
Sbjct: 163 PLTDNNIIEQELGKFGIVCIEDMVHQICNVGPHFKEVVSFMWPFELKKPAEG--LKGSKT 222

Query: 121 LYKEGGDVGNREDDINDLINE 131
           LYK+GGD GNRED IN+LIN+
Sbjct: 223 LYKDGGDTGNREDHINELINK 235

[Close]
BLAST of Lsi03G009130 vs. TrEMBL
Match: A0A0D2TBM3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G214200 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-27
Identity = 72/141 (51.06%), Postives = 95/141 (67.38%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++FS  F KA E ++  LQ +       +  + Y NLKN++EL+YKKG+ +IDK + V
Sbjct: 117 LRKLFSGVFVKATEGVMEMLQKVE-----PYVTYGYPNLKNMKELIYKKGYARIDK-KAV 176

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           D+VHEIA VGPHFKEVI+F+ P+ L KPE  G ++GKK 
Sbjct: 177 PLTDNNIIEQTLGKHGIICIEDIVHEIANVGPHFKEVIHFMGPLMLSKPE-DGLIKGKKQ 236

Query: 121 LYKEGGDVGNREDDINDLINE 131
            YKEGGD GNR D+INDLI++
Sbjct: 237 PYKEGGDAGNRGDEINDLISK 250

[Close]
BLAST of Lsi03G009130 vs. TAIR10
Match: AT2G01250.1 (AT2G01250.1 Ribosomal protein L30/L7 family protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 58/139 (41.73%), Postives = 88/139 (63.31%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F+  F K N++ +  L+ +       +  + + NLK+V+EL+YK+G+ K++ QR+ 
Sbjct: 108 LRQIFNGVFLKVNKATMNMLRRVE-----PYVTYGFPNLKSVKELIYKRGYGKLNHQRIA 167

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
            LTD +I+EQ           D++HEI TVGPHFKE   FLWP +L  P GG  L+ K++
Sbjct: 168 -LTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGG--LKKKRN 227

Query: 121 LYKEGGDVGNREDDINDLI 129
            Y EGGD GNRE+ IN+LI
Sbjct: 228 HYVEGGDAGNRENFINELI 238

[Close]
BLAST of Lsi03G009130 vs. TAIR10
Match: AT2G44120.2 (AT2G44120.2 Ribosomal protein L30/L7 family protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22
Identity = 57/139 (41.01%), Postives = 88/139 (63.31%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+G+ K++ QR+ 
Sbjct: 113 LRQIFNGVFLKVNKATVNMLRRVE-----PYVTYGYPNLKSVKELIYKRGYGKLNHQRIA 172

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
            LTD +I++Q           D++HEI TVGPHFKE   FLWP +L  P GG  L+ K++
Sbjct: 173 -LTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGG--LKKKRN 232

Query: 121 LYKEGGDVGNREDDINDLI 129
            Y EGGD GNRE+ IN+L+
Sbjct: 233 HYVEGGDAGNRENFINELV 243

[Close]
BLAST of Lsi03G009130 vs. TAIR10
Match: AT3G13580.3 (AT3G13580.3 Ribosomal protein L30/L7 family protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-22
Identity = 57/139 (41.01%), Postives = 87/139 (62.59%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+GF K++ QR  
Sbjct: 110 LRQIFNGVFLKVNKATINMLRRVE-----PYVTYGYPNLKSVKELIYKRGFGKLNHQRTA 169

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
            LTD +I++Q           D++HEI TVGPHFKE   FLWP +L  P GG  ++ K++
Sbjct: 170 -LTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGG--MKKKRN 229

Query: 121 LYKEGGDVGNREDDINDLI 129
            Y EGGD GNRE+ IN+L+
Sbjct: 230 HYVEGGDAGNRENFINELV 240

[Close]
BLAST of Lsi03G009130 vs. TAIR10
Match: AT1G80750.1 (AT1G80750.1 Ribosomal protein L30/L7 family protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-22
Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           +  VF+  FAKA +S+ +KL  L + P   +  + Y N K+V++L+YKKG T I+    V
Sbjct: 112 LKSVFTGVFAKATDSLFQKL--LKVQP---YVTYGYPNDKSVKDLIYKKGCTIIEGNP-V 171

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           D+V+EIA VG HF+EV+ FL P++L+KP     L  KK 
Sbjct: 172 PLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPV-ADVLHRKKQ 231

Query: 121 LYKEGGDVGNREDDINDLINE 131
           ++ EGGD GNRED INDLI++
Sbjct: 232 VFSEGGDTGNREDKINDLISK 245

[Close]
BLAST of Lsi03G009130 vs. NCBI nr
Match: gi|659131342|ref|XP_008465636.1| (PREDICTED: 60S ribosomal protein L7-1 [Cucumis melo])

HSP 1 Score: 174.1 bits (440), Expect = 2.5e-40
Identity = 96/141 (68.09%), Postives = 106/141 (75.18%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           +SR+FS+ FAKANES+L KLQ +       +  + Y NLKNVRELVYKKGF KIDKQR V
Sbjct: 114 LSRIFSAVFAKANESVLGKLQRVE-----PYVTYGYPNLKNVRELVYKKGFAKIDKQR-V 173

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           DMV+EIA VGPHFKEVI FLWP EL+KP GGG LQGKKS
Sbjct: 174 PLTDNNIIEQALGKHGIVCVEDMVYEIANVGPHFKEVISFLWPFELEKPGGGGCLQGKKS 233

Query: 121 LYKEGGDVGNREDDINDLINE 131
            YK+GGD GNREDDINDLINE
Sbjct: 234 SYKDGGDAGNREDDINDLINE 248

[Close]
BLAST of Lsi03G009130 vs. NCBI nr
Match: gi|778688195|ref|XP_011652694.1| (PREDICTED: 60S ribosomal protein L7-1 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 3.6e-39
Identity = 98/141 (69.50%), Postives = 105/141 (74.47%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           +SR+FS+ FAKANESIL KLQ +       +  + Y NLKNVRELVYKKGF KIDKQR V
Sbjct: 114 LSRIFSAVFAKANESILGKLQRVE-----PYVTYGYPNLKNVRELVYKKGFAKIDKQR-V 173

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           DMVHEIA VGPHFKEVI FLWP EL+KP GG  LQGKKS
Sbjct: 174 PLTDNNIIEQALGKHGIVCMEDMVHEIANVGPHFKEVISFLWPFELEKP-GGRCLQGKKS 233

Query: 121 LYKEGGDVGNREDDINDLINE 131
            YKEGGD GNREDDINDLINE
Sbjct: 234 SYKEGGDSGNREDDINDLINE 247

[Close]
BLAST of Lsi03G009130 vs. NCBI nr
Match: gi|225465520|ref|XP_002272916.1| (PREDICTED: 60S ribosomal protein L7-2 [Vitis vinifera])

HSP 1 Score: 136.3 bits (342), Expect = 5.8e-29
Identity = 78/141 (55.32%), Postives = 92/141 (65.25%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F     KANE IL  LQ +       +  + Y NLKNVREL+YKKGF KI+ Q+ V
Sbjct: 112 LRKIFDGVLVKANEGILEMLQKVE-----PYVAYGYPNLKNVRELIYKKGFAKIEGQK-V 171

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           D+VHEIA VGPHFKEV  FLWP  L+KPEGG   QGKK 
Sbjct: 172 PLTDNNIIEQALGKHGIMCIEDIVHEIANVGPHFKEVNSFLWPFTLNKPEGG--FQGKKK 231

Query: 121 LYKEGGDVGNREDDINDLINE 131
           L+KEGGD GNR D IN+LI +
Sbjct: 232 LFKEGGDAGNRGDKINELIGK 244

[Close]
BLAST of Lsi03G009130 vs. NCBI nr
Match: gi|657953444|ref|XP_008362720.1| (PREDICTED: 60S ribosomal protein L7-1 [Malus domestica])

HSP 1 Score: 136.0 bits (341), Expect = 7.6e-29
Identity = 74/141 (52.48%), Postives = 99/141 (70.21%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + ++F++ F KA ++IL KLQ +       +  + Y NLKNVREL+YKKGF KIDK++ V
Sbjct: 112 LRKIFNAVFVKATDAILEKLQRV-----QPYVTYGYPNLKNVRELIYKKGFAKIDKKK-V 171

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD N+IEQ           D+VHEIAT+GPHFKEV  FLWP  L+KPE G  L+G K+
Sbjct: 172 PLTDNNLIEQAMGQYDVICIEDIVHEIATIGPHFKEVTGFLWPFVLNKPEAG--LKGSKT 231

Query: 121 LYKEGGDVGNREDDINDLINE 131
           +YK+GGD G+R D IN+LI++
Sbjct: 232 VYKDGGDAGDRGDKINELISK 244

[Close]
BLAST of Lsi03G009130 vs. NCBI nr
Match: gi|590569364|ref|XP_007011052.1| (Ribosomal protein L30/L7 family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-28
Identity = 75/141 (53.19%), Postives = 95/141 (67.38%), Query Frame = 1 

Query: 1   ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLV 60
           + RVFS  F KA E ++  LQ +       +  + Y NLKNV+EL+YKKG+ +IDK + V
Sbjct: 116 LRRVFSGIFVKATEGVIEMLQKVE-----PYVTYGYPNLKNVKELIYKKGYARIDK-KAV 175

Query: 61  PLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKS 120
           PLTD NIIEQ           D+VHEIA VGPHFKEV +F+ P+ L KP  GG +QGKK 
Sbjct: 176 PLTDNNIIEQELGKYGIICLEDIVHEIANVGPHFKEVNHFMGPLMLSKP--GGVIQGKKQ 235

Query: 121 LYKEGGDVGNREDDINDLINE 131
            Y+EGGD GNRED+INDLI++
Sbjct: 236 PYREGGDAGNREDEINDLISK 248

The following BLAST results are available for this feature:
BLAST of Lsi03G009130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL72_ARATH2.6e-2141.7360S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=2 SV=1[more]
RL73_ARATH3.4e-2141.0160S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1[more]
RL74_ARATH4.5e-2141.0160S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1[more]
RL71_ARATH5.8e-2146.8160S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1[more]
RL7_CAEEL6.5e-2041.1360S ribosomal protein L7 OS=Caenorhabditis elegans GN=rpl-7 PE=3 SV=1[more]
BLAST of Lsi03G009130 vs. TrEMBL
Match NameE-valueIdentityDescription
D7U871_VITVI4.1e-2955.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0070g00130 PE=4 SV=... [more]
A0A061FT16_THECC1.5e-2853.19Ribosomal protein L30/L7 family protein isoform 1 OS=Theobroma cacao GN=TCM_0452... [more]
M5WTB4_PRUPE3.4e-2853.19Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010527mg PE=4 SV=1[more]
A0A151TA08_CAJCA1.0e-2749.6560S ribosomal protein L7-1 OS=Cajanus cajan GN=KK1_018475 PE=4 SV=1[more]
A0A0D2TBM3_GOSRA3.8e-2751.06Uncharacterized protein OS=Gossypium raimondii GN=B456_011G214200 PE=3 SV=1[more]
BLAST of Lsi03G009130 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01250.11.5e-2241.73 Ribosomal protein L30/L7 family protein[more]
AT2G44120.21.9e-2241.01 Ribosomal protein L30/L7 family protein[more]
AT3G13580.32.5e-2241.01 Ribosomal protein L30/L7 family protein[more]
AT1G80750.13.3e-2246.81 Ribosomal protein L30/L7 family protein[more]
BLAST of Lsi03G009130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131342|ref|XP_008465636.1|2.5e-4068.09PREDICTED: 60S ribosomal protein L7-1 [Cucumis melo][more]
gi|778688195|ref|XP_011652694.1|3.6e-3969.50PREDICTED: 60S ribosomal protein L7-1 [Cucumis sativus][more]
gi|225465520|ref|XP_002272916.1|5.8e-2955.32PREDICTED: 60S ribosomal protein L7-2 [Vitis vinifera][more]
gi|657953444|ref|XP_008362720.1|7.6e-2952.48PREDICTED: 60S ribosomal protein L7-1 [Malus domestica][more]
gi|590569364|ref|XP_007011052.1|2.2e-2853.19Ribosomal protein L30/L7 family protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016082Ribosomal_L30_ferredoxin-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0034641 cellular nitrogen compound metabolic process
biological_process GO:0010467 gene expression
biological_process GO:0044238 primary metabolic process
cellular_component GO:0005829 cytosol
cellular_component GO:0044446 intracellular organelle part
cellular_component GO:0005840 ribosome
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G009130.1Lsi03G009130.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016082Ribosomal protein L30, ferredoxin-like fold domainGENE3DG3DSA:3.30.1390.20coord: 91..129
score: 2.
IPR016082Ribosomal protein L30, ferredoxin-like fold domainunknownSSF55129Ribosomal protein L30p/L7ecoord: 30..130
score: 1.57
NoneNo IPR availablePANTHERPTHR1152460S RIBOSOMAL PROTEIN L7coord: 3..132
score: 5.0
NoneNo IPR availablePANTHERPTHR11524:SF1160S RIBOSOMAL PROTEIN L7-1coord: 3..132
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G009130Cucurbita pepo (Zucchini)cpelsiB168
Lsi03G009130Watermelon (Charleston Gray)lsiwcgB219
Lsi03G009130Watermelon (97103) v1lsiwmB241
Lsi03G009130Watermelon (97103) v2lsiwmbB218