Lsi01G002920 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi01G002920
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr01 : 2586287 .. 2590820 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTTGAGGTCATCCGGCGAGGGCTACTGTCAACACTCCATCATGTAAGAAAAGTTACCGTTACCACCATGTGGGCAAACTAATGATTGGAATTACATTGTTGGCACTGTTGTAGTCCCAATAAGGTTAGCTTTCCTACTCCCTTATTTTTATAAAACTTTCAATAAATTTTTTTTTCATATTTTATAAATGTTTACTTTTTATTATATCTTTGTTTTGTTTTGTTTTTATCTTCTTTGTGCTATCGACATCATGTTTTTGTTTTAAGAGTAAATGATTAAAATACAATAACTGATTGTAATGAATGACTAAACTTGAGAAAGGTTGAGCAAGAAATGAAATTTTATTGTTAATTGTTTTAGGTGGTTAGGAATGGAGCATTGAACTCTAATTTTATTATTATTATTTTTAGGAAAAGTCAAACTTTCATTGAGATCAGATGAAAGAATACAAGGGAATAGAAAAAAGAAGGGCCTCTAATAAAGCAATACAAGACCTAAAGCGTAATTAAAAAAAGCTTTACACAGTTCCCATTCAAAGGTTTGATATATAATAAGGTCACACCTAACTCAAGATTTCTCAATCCCTCTAAAATCCTATTGTTTATTTTACCCAAAACCCCCATAAAATAAGACAAAAACTAACCCACCACAAGTGCCCCTTTTCATGAATGATATCATGGAGAGTAATTGAATTGATCATGAAGGACTTGAGAGAAAGTATGGACAAATAAAGATATTTCTTAGAATTTTGGAAGATTTGTTAAGGTGATATACATTTGAAGATAACATTAGAGATTATATAATGAAGAAAAAGAGAAAGAACACACATTTGTTGTTGACGGTTGTGGATTAAAGTATGTGATTAGTCTTCAACTTTTATACTGAAGAGGTCTAGCCTTTCTTTGAATTACGAAGTAAACATTTGGTTGAAGATTTCAAAGAATGGACAAATCAAGAGATACTTATGATAAGAAAATTTTGGTGTAAAGTCTAGGATTGGACTGCAAATTTTTGATTGATGGGTCTAGCCCTTCTTTGGACAAAAGAGTACGAAATTAGATGGGAAGTTAAGAAAATGGACAAACAAAGATACATCTTAGAATTGAGGACAATTTGTTAAAGTGATATATATTGGAAGATGACATTAGAGATTATATACTGAAAAAGGGAAAACACACATTTGTTGTTAACGGTTGTGTATGCTAGGATGAAGGAAGATAAGTATAAGGATAAGATAATTTTGAATTAAAGTATGTGATTGGACTTCAACTTTTTGATTGAAGAGCTCTTGCCTTTCTTTGGATTATGAAGTAAACATTTGGCCGAAGATTTCAGAATATTGACAAGATAAGAGATACATAGGATAAGAGAGTTTTTGTTTAAAGTCTGAGATGAGACATAAACTTTAAGATTGAAAGGGTGTAGTCGTTCTTTGGACAAAAGAGTAGATTTATGAAAATGGACAAATAAGGACACTTCTTAGAGTTCTGGACGATATGTTAAAGTGATATTTATTGGAAGATAACATAAGAGATTATATACTGAAAAAAGGAAAACACAAATTTGTTGTTGATGATTGTGGATGCTTGGGAGAAGGAAGATAAGTAAAGATAAGATGGTTTTGGATTAAAGTATGTGATTGGACTTGAACTTTTTGGTTAAAGAGGTAGAGACATTCTTTGGATTACGAAGTAAACCTGTGGTTGAAGATTTCAGAAAATGGACAAGTTAAGTGATACATAGGATAAGATAATTTTGGTTTAAAGTCTGAGATTGGACTTCAACTTTAAGATTGAACGGGTCTAGTCGTTCTTTAGACGAAAGAGTAGACAATTGTTGAAGAGTTAAGAAAATGGACAAATAAAGGTACTTCTTTGAATTTTGGACAATTTGTTAGGGTAATGTTTATTCGAAAATAACATTAGGGATTATATACCTAAAAAGGGAAGATCCAAATTTGGTGTTGACGGTTGTGTAAGCTTGGAAGAAGGAAGATAAGTAAAGATAAGTTGATTTTGGATTAAAGGATGTGATTGAATATGAACTTTTTGGTTGAAGAGGAGCCTTTCTTTGGATTAGGATATAAACATTTGGTTGAAGATTTCAAAAAGTGGGCAAGTTAAGAGATACATAGGATAAGAGAATTTTGGTTTAAGGTCTGAGATTGGACTTCAACTTTAAGATTGAACGGGTCTAGCCGTTATTTGGACGAAAGAGTAGAAAACTGGATGGATAGTTAAGAAAATGGACAAATAAAGGTACTTCTTTTAATTTTGGACAATTTGTAAATGTGATATATATTTTGGACAATAGAGATTGTATACTGAAAAAGGAAAGCACAAATTTGTTGTTGACGGTTGTGTAAGCTTGGAAGAAGGAAGATAAGTAAAGATAAGATGATTTTGGATTAAAGTATTGTGGTTGGACATGAACTTTTTGGTTGAAGAGGTCTAGCCTTTCTTTTGATTATGAAGTAAACATTTGGTTGAAGATTTTTGAAAATGGACAAATTAAGACATGCATAAAATAAGAGAATTTTATTTCAAAGTTTGAGATTGAACTTCAACGTTAAGATTGAACGTGTCTAGCCATTCTTTGGATGAAAGAATAAGTAGTGGATGGAGAGTTAAGATAATGGACAAATAAAGATAATTGGAATTGAGAACCTTTTAATAAGGTGATATATATTGGAAGATGATATTAGAGATTTTACGCTGAAAAAAGGAAAACACACATTTGTTGTTGAAGGTTGTGTATGCTCGGATGGAGGAAGATTAAGTATAAGGATAAGATAATTTTGGATTAAAGTATGTGATTGGACTTCAACTTTTTGATTAAAGAGCTCCAGCCTTTCTTTGGATAAAAAAGTAAACATTTGGATGAAGATTTCAGAATATTGACAAGTTAAGAGATGCATAGGATACGAGAGTTTTTGTTTAAAGTCTGTGATTGGACGTAAACTTTAAGATTGAACGGGTGTTGTCGTTCTTTGGACAAAAGAGTAGAAAATTGGATGGAGATTTAAGAAAATGGACAAATAAGGATACTTCTTAGAGTTTTGGACGATATGTTAACGTGATATTTATTGGAAGATGATATTAGAGATTATAGGCTGAGAAAGGGAAAACACAAATTCGTTGTTGACGATTGTGGATACTTGGGAGAAGGAAGATAAGTAAAGATAAGATGATTTTGGTTTAAAGTATGTGATTGGACTTGAACTTTTTGGTTGAAGAGGTCGAGTCTTTCTTTGGATTACGAAGTAAACAATTGGTTGAAGATTTCATAAATGGACAAGTTAAGAGATACATAGGATCAGATAAGTTTGGTTTAAAGTTTGAGATTGGACTTCAACTTTAAGATTGAACGGGTTTGGTTGTTCTTTGGACGAAAGAGTAGAAAATTGGATGCAGAAAATGGACAAATAAAGTTACTTCTTTGAATGTTGGACAATTTGCTAAGGTGATGTATATTCGAAGATAACATTAGAGATTATATACTTCAAAAGGGAAAACACAAATTTTTTATTGACGATTGTGTAAGCTTGGAATAAGGAAGATAAGTAAAGATAAGATGATTTTGGATTAAACTATGTGATCGGACATGACTTTTTTGGTTGAAGAGATCTAGCCTTTCTTTGGATTAAGAAGTTAACATTTGGTTGAAGATTTCAGAAAATGGACAGGTTAAGATATACATAGGATAAAGAGAATTTTGGTTTAAAGTTTGAGATTGGACTTGAACTTTAGGATTTAACGGGTCTAGCCATTCTTTGGACAAAAGACTAGAAAATTGGATTGAGAGTTAAGAAAATGGACAAATAAAGATACTTTTTATAATTCTGGATGATTTGTTAAGGTGATATATATTGGAAGACAACATTAGTGATTATATATAGTGAAAAAGGGAAACACAAAGTTGTTGTTGACGGTTGTGTATGCTTTAAAAAGGAAGATAAGTGAGGGTATGATGATTTTAGATTAAAGTATACGATTGGACTTTAACTTTTTGATTGAAGAGGTCTACCTTTTATTTGGATTATGAAGTAAACATTTGGTTGAGAATTTCAGAAAATGGACAAGTTATATATAGTGTTGATGGTTATGTATGCTTTAAAGAAGGAAGATAAGTGAGGATATGATGATTTTGGATTAAAGTATACGATTGGACTTTAACTTTTTGATTGAAGAGGGTCTACCCTTTCTTTGGATTATGAAGTAAACATTTGGTTGAGGATTTCAAAAAATGGACAAGTTAAGAGACACATAATATAAGAGAATTTTGGTTTAAAGTTTGAAATTGAACTTCAACTTTAAGATTGAACAGTCTAGCCGTTCTTTTAACGAAAGAGTAGAAAACTGGATGAAGAGTTAAGAAAATGGACAAATAAAGATACTTCTTAGAATTTTGAACGATTTATTAAGGTGATATATATTTGAAGATAAGATTAGAGTTTAGATACTGAAAAAGGGAAAATACAAATTTGTTGTTGACAGTTGTTTATGCTTGGAAGAAGGAAAATAAGTAA

mRNA sequence

ATGAAGTTTGAGGTCATCCGGCGAGGGCTACTGTCAACACTCCATCATAGATGCATAGGATACGAGAGTTTTTGTTTAAAGTCTGTGATTGGACGTGATATATATTGGAAGACAACATTAGTGATTATATATAGTGAAAAAGGGAAACACAAAGTTGTTGTTGACGGTTGTAAAATGGACAAGTTATATATAGTGTTGATGGTTATGTATGCTTTAAAGAAGGAAGATAAGGAAAATACAAATTTGTTGTTGACAGTTGTTTATGCTTGGAAGAAGGAAAATAAGTAA

Coding sequence (CDS)

ATGAAGTTTGAGGTCATCCGGCGAGGGCTACTGTCAACACTCCATCATAGATGCATAGGATACGAGAGTTTTTGTTTAAAGTCTGTGATTGGACGTGATATATATTGGAAGACAACATTAGTGATTATATATAGTGAAAAAGGGAAACACAAAGTTGTTGTTGACGGTTGTAAAATGGACAAGTTATATATAGTGTTGATGGTTATGTATGCTTTAAAGAAGGAAGATAAGGAAAATACAAATTTGTTGTTGACAGTTGTTTATGCTTGGAAGAAGGAAAATAAGTAA

Protein sequence

MKFEVIRRGLLSTLHHRCIGYESFCLKSVIGRDIYWKTTLVIIYSEKGKHKVVVDGCKMDKLYIVLMVMYALKKEDKENTNLLLTVVYAWKKENK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G002920.1Lsi01G002920.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G002920Melon (DHL92) v3.6.1lsimedB132
Lsi01G002920Melon (DHL92) v3.6.1lsimedB138
Lsi01G002920Melon (DHL92) v3.6.1lsimedB156
Lsi01G002920Silver-seed gourdcarlsiB132
Lsi01G002920Silver-seed gourdcarlsiB585
Lsi01G002920Silver-seed gourdcarlsiB496
Lsi01G002920Silver-seed gourdcarlsiB865
Lsi01G002920Cucumber (Chinese Long) v3cuclsiB020
Lsi01G002920Cucumber (Chinese Long) v3cuclsiB122
Lsi01G002920Cucumber (Chinese Long) v3cuclsiB462
Lsi01G002920Watermelon (97103) v2lsiwmbB115
Lsi01G002920Watermelon (97103) v2lsiwmbB130
Lsi01G002920Wax gourdlsiwgoB166
Lsi01G002920Wax gourdlsiwgoB168
Lsi01G002920Wax gourdlsiwgoB190
Lsi01G002920Bottle gourd (USVL1VR-Ls)lsilsiB066
Lsi01G002920Cucumber (Gy14) v1cgylsiB022
Lsi01G002920Cucumber (Gy14) v1cgylsiB193
Lsi01G002920Cucurbita maxima (Rimu)cmalsiB199
Lsi01G002920Cucurbita maxima (Rimu)cmalsiB368
Lsi01G002920Cucurbita maxima (Rimu)cmalsiB602
Lsi01G002920Cucurbita maxima (Rimu)cmalsiB786
Lsi01G002920Cucurbita moschata (Rifu)cmolsiB189
Lsi01G002920Cucurbita moschata (Rifu)cmolsiB354
Lsi01G002920Cucurbita moschata (Rifu)cmolsiB588
Lsi01G002920Cucurbita moschata (Rifu)cmolsiB774
Lsi01G002920Cucurbita pepo (Zucchini)cpelsiB049
Lsi01G002920Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G002920Cucurbita pepo (Zucchini)cpelsiB415
Lsi01G002920Wild cucumber (PI 183967)cpilsiB018
Lsi01G002920Wild cucumber (PI 183967)cpilsiB439
Lsi01G002920Cucumber (Chinese Long) v2culsiB019
Lsi01G002920Cucumber (Chinese Long) v2culsiB434
Lsi01G002920Melon (DHL92) v3.5.1lsimeB127
Lsi01G002920Melon (DHL92) v3.5.1lsimeB149
Lsi01G002920Watermelon (Charleston Gray)lsiwcgB127
Lsi01G002920Watermelon (Charleston Gray)lsiwcgB133
Lsi01G002920Watermelon (97103) v1lsiwmB136
Lsi01G002920Watermelon (97103) v1lsiwmB144
Lsi01G002920Cucumber (Gy14) v2cgyblsiB015
Lsi01G002920Cucumber (Gy14) v2cgyblsiB099
Lsi01G002920Cucumber (Gy14) v2cgyblsiB398