Lsi01G001850 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCTCCAAGATCAGTCCATCTTCAGGCTCTTAACTACAAACGCCTCCTTACTTCGGGATTTGAGAGAGAGGACATAAACTTTGAGACTAACAATTCAAACATGAATCTTCCTGAATTCAATGAACACGATGATTCGTATGCACGCCGATTAGAAACCCTTGCCGCATTCAATCTTAGACTTTTTCAAGAAAGTAAGGATTATTTCCTTGAAAATTCATTTTATTCTCAATATCATATCAATGAAGACGAAGATATTCTCTTACGCTTCGCGGAATTGTCAGATACTGAAATATTGAACACTGAACTGGATGATTGTTCAAGCCTTGCAGATAAAGAAAGCTATGTCGGATCCGAGCATAATGTTGAAGAAGAAGATCAGGAAGATCTCCTTGAAGATGCATTGCCTCCTCCAAATGATATCAAGGAAGACGAAGAAGATATTCTCCTTCGGCTCATGGAAGTGTCCGTGGAGTCGGATCCTGAATTGGAAACAGAACAGAAGGAAAGCCACGGCGGATTCAAGCATAAAATTGTAAGAGAAAATCAGGAATATTTCCTTCAAGATCCAGCGTATCTTGAAGATGATATCAAGGAAGACGAAGATATCCTCCGCCGGTTGGAATCAGATGATGAATTCAAGACAGAACAGAAAAAGGAAGATGAAGATATTCTCCGTCGGTTGAACGAATCAGTCATGGAGTCGGCTCTTCAATCCGCGACCGCGGCTTATGAAATCAGGAAAGAACAAAAAGATCGGCATGTATGTTCGAATTGTCATCAAAGGCTTGCATATAAAGAAAGCGAAGCCGGATTTAAGCAAAGAATGGACGAAGCAATTCAGAAAAAACTCCACGAAGAAGCATCGCATTCTCCAGATAATATCAAGGAAGCCGAAGATCCGCTCATTCTGTTCATGGAGTCAGTTCTTGAAGCCGTGAACGCCGGTGAGAAAGAACAAATGAAAGATGTGAACGGAGATTTGAAAGGCGGATTAAAGCAGAAAATGACGACAGAGAAGGTCGATCTGTTTGATTCGGGCTCTCTTCAAGTTGTGGAGGAAATTGTGTTGAAATTTTACCAATTCATTGATCATATAATCCCGATATTGAAAGATACAGAGAAAGTGAGATTCGAAGTGCAGGATAAGTTTGAGAAGGTAAACGATCTGCTTGTGACTTGGTCTAAAATTGTGAACAAACTGATCAACGAACTGGAACGCATGAAGAATGATGGAAAAATTAATGGAAAAACTGAAAATATTCCTGAAATTTTAGTTCAACTGGAGATTAATGCACATTTGGTGGAACGATCTTTCCATCACGGCATTGGGTTTGTGTTTAATAACAAAAGTAGTAGGGAAAATGAGTTATCAGGTTGTATAAAAGGGCTTAATCGGTCAAGAGAAAACTTGGGGACTGTCCTGACCAGAATCAGGGAACTGATCAACGCCAAGAGAATGGAAGAAGATACGGATTCCACAGACAAATTCAAGAACAATACATGTGATTTTAATGCTTCTTCTCAGCTTCCGGATGGGTTTGAGAGATAA ATGACTTCTCCAAGATCAGTCCATCTTCAGGCTCTTAACTACAAACGCCTCCTTACTTCGGGATTTGAGAGAGAGGACATAAACTTTGAGACTAACAATTCAAACATGAATCTTCCTGAATTCAATGAACACGATGATTCGTATGCACGCCGATTAGAAACCCTTGCCGCATTCAATCTTAGACTTTTTCAAGAAAGTAAGGATTATTTCCTTGAAAATTCATTTTATTCTCAATATCATATCAATGAAGACGAAGATATTCTCTTACGCTTCGCGGAATTGTCAGATACTGAAATATTGAACACTGAACTGGATGATTGTTCAAGCCTTGCAGATAAAGAAAGCTATGTCGGATCCGAGCATAATGTTGAAGAAGAAGATCAGGAAGATCTCCTTGAAGATGCATTGCCTCCTCCAAATGATATCAAGGAAGACGAAGAAGATATTCTCCTTCGGCTCATGGAAGTGTCCGTGGAGTCGGATCCTGAATTGGAAACAGAACAGAAGGAAAGCCACGGCGGATTCAAGCATAAAATTGTAAGAGAAAATCAGGAATATTTCCTTCAAGATCCAGCGTATCTTGAAGATGATATCAAGGAAGACGAAGATATCCTCCGCCGGTTGGAATCAGATGATGAATTCAAGACAGAACAGAAAAAGGAAGATGAAGATATTCTCCGTCGGTTGAACGAATCAGTCATGGAGTCGGCTCTTCAATCCGCGACCGCGGCTTATGAAATCAGGAAAGAACAAAAAGATCGGCATGTATGTTCGAATTGTCATCAAAGGCTTGCATATAAAGAAAGCGAAGCCGGATTTAAGCAAAGAATGGACGAAGCAATTCAGAAAAAACTCCACGAAGAAGCATCGCATTCTCCAGATAATATCAAGGAAGCCGAAGATCCGCTCATTCTGTTCATGGAGTCAGTTCTTGAAGCCGTGAACGCCGGTGAGAAAGAACAAATGAAAGATGTGAACGGAGATTTGAAAGGCGGATTAAAGCAGAAAATGACGACAGAGAAGGTCGATCTGTTTGATTCGGGCTCTCTTCAAGTTGTGGAGGAAATTGTGTTGAAATTTTACCAATTCATTGATCATATAATCCCGATATTGAAAGATACAGAGAAAGTGAGATTCGAAGTGCAGGATAAGTTTGAGAAGGTAAACGATCTGCTTGTGACTTGGTCTAAAATTGTGAACAAACTGATCAACGAACTGGAACGCATGAAGAATGATGGAAAAATTAATGGAAAAACTGAAAATATTCCTGAAATTTTAGTTCAACTGGAGATTAATGCACATTTGGTGGAACGATCTTTCCATCACGGCATTGGGTTTGTGTTTAATAACAAAAGTAGTAGGGAAAATGAGTTATCAGGTTGTATAAAAGGGCTTAATCGGTCAAGAGAAAACTTGGGGACTGTCCTGACCAGAATCAGGGAACTGATCAACGCCAAGAGAATGGAAGAAGATACGGATTCCACAGACAAATTCAAGAACAATACATGTGATTTTAATGCTTCTTCTCAGCTTCCGGATGGGTTTGAGAGATAA ATGACTTCTCCAAGATCAGTCCATCTTCAGGCTCTTAACTACAAACGCCTCCTTACTTCGGGATTTGAGAGAGAGGACATAAACTTTGAGACTAACAATTCAAACATGAATCTTCCTGAATTCAATGAACACGATGATTCGTATGCACGCCGATTAGAAACCCTTGCCGCATTCAATCTTAGACTTTTTCAAGAAAGTAAGGATTATTTCCTTGAAAATTCATTTTATTCTCAATATCATATCAATGAAGACGAAGATATTCTCTTACGCTTCGCGGAATTGTCAGATACTGAAATATTGAACACTGAACTGGATGATTGTTCAAGCCTTGCAGATAAAGAAAGCTATGTCGGATCCGAGCATAATGTTGAAGAAGAAGATCAGGAAGATCTCCTTGAAGATGCATTGCCTCCTCCAAATGATATCAAGGAAGACGAAGAAGATATTCTCCTTCGGCTCATGGAAGTGTCCGTGGAGTCGGATCCTGAATTGGAAACAGAACAGAAGGAAAGCCACGGCGGATTCAAGCATAAAATTGTAAGAGAAAATCAGGAATATTTCCTTCAAGATCCAGCGTATCTTGAAGATGATATCAAGGAAGACGAAGATATCCTCCGCCGGTTGGAATCAGATGATGAATTCAAGACAGAACAGAAAAAGGAAGATGAAGATATTCTCCGTCGGTTGAACGAATCAGTCATGGAGTCGGCTCTTCAATCCGCGACCGCGGCTTATGAAATCAGGAAAGAACAAAAAGATCGGCATGTATGTTCGAATTGTCATCAAAGGCTTGCATATAAAGAAAGCGAAGCCGGATTTAAGCAAAGAATGGACGAAGCAATTCAGAAAAAACTCCACGAAGAAGCATCGCATTCTCCAGATAATATCAAGGAAGCCGAAGATCCGCTCATTCTGTTCATGGAGTCAGTTCTTGAAGCCGTGAACGCCGGTGAGAAAGAACAAATGAAAGATGTGAACGGAGATTTGAAAGGCGGATTAAAGCAGAAAATGACGACAGAGAAGGTCGATCTGTTTGATTCGGGCTCTCTTCAAGTTGTGGAGGAAATTGTGTTGAAATTTTACCAATTCATTGATCATATAATCCCGATATTGAAAGATACAGAGAAAGTGAGATTCGAAGTGCAGGATAAGTTTGAGAAGGTAAACGATCTGCTTGTGACTTGGTCTAAAATTGTGAACAAACTGATCAACGAACTGGAACGCATGAAGAATGATGGAAAAATTAATGGAAAAACTGAAAATATTCCTGAAATTTTAGTTCAACTGGAGATTAATGCACATTTGGTGGAACGATCTTTCCATCACGGCATTGGGTTTGTGTTTAATAACAAAAGTAGTAGGGAAAATGAGTTATCAGGTTGTATAAAAGGGCTTAATCGGTCAAGAGAAAACTTGGGGACTGTCCTGACCAGAATCAGGGAACTGATCAACGCCAAGAGAATGGAAGAAGATACGGATTCCACAGACAAATTCAAGAACAATACATGTGATTTTAATGCTTCTTCTCAGCTTCCGGATGGGTTTGAGAGATAA MTSPRSVHLQALNYKRLLTSGFEREDINFETNNSNMNLPEFNEHDDSYARRLETLAAFNLRLFQESKDYFLENSFYSQYHINEDEDILLRFAELSDTEILNTELDDCSSLADKESYVGSEHNVEEEDQEDLLEDALPPPNDIKEDEEDILLRLMEVSVESDPELETEQKESHGGFKHKIVRENQEYFLQDPAYLEDDIKEDEDILRRLESDDEFKTEQKKEDEDILRRLNESVMESALQSATAAYEIRKEQKDRHVCSNCHQRLAYKESEAGFKQRMDEAIQKKLHEEASHSPDNIKEAEDPLILFMESVLEAVNAGEKEQMKDVNGDLKGGLKQKMTTEKVDLFDSGSLQVVEEIVLKFYQFIDHIIPILKDTEKVRFEVQDKFEKVNDLLVTWSKIVNKLINELERMKNDGKINGKTENIPEILVQLEINAHLVERSFHHGIGFVFNNKSSRENELSGCIKGLNRSRENLGTVLTRIRELINAKRMEEDTDSTDKFKNNTCDFNASSQLPDGFER
BLAST of Lsi01G001850 vs. TrEMBL
Match: A0A0A0KNQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G521080 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 8.3e-55 Identity = 175/370 (47.30%), Postives = 221/370 (59.73%), Query Frame = 1
BLAST of Lsi01G001850 vs. NCBI nr
Match: gi|659080968|ref|XP_008441077.1| (PREDICTED: uncharacterized protein LOC103485304 [Cucumis melo]) HSP 1 Score: 229.2 bits (583), Expect = 1.7e-56 Identity = 181/385 (47.01%), Postives = 233/385 (60.52%), Query Frame = 1
BLAST of Lsi01G001850 vs. NCBI nr
Match: gi|700194157|gb|KGN49361.1| (hypothetical protein Csa_6G521080 [Cucumis sativus]) HSP 1 Score: 223.0 bits (567), Expect = 1.2e-54 Identity = 175/370 (47.30%), Postives = 221/370 (59.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |