Cucsa.242800 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGATAGATCGGCTTTCAGCACCTAAGCGTGTATTGGCCTGAACTCAATACCATATTTTTGTCCCAAGCTATGGCGGAATCGGATTTCAGGCAAACCAATGAACCAGACGAAGAAGAAGAAGACTACATGGGCGACCTCTCTAAGTTGCTTCCTCCAGACGATACTACCTCTTCCAAATCCATATTCAGAAAGGTAACAACTACTAATCTTTGCTTTAACTCTTCACCACGGATTTGCTGCTTCATTTTATCTAAATTCTAGGGTTAGATACTCTATTTATTTTTTATTTTTTTTCTAGGGCTCTAACTGAGGTTTGATTACAGGTTGCTGCTAATAAAACCCCTGTTGTCCAATCATCGAATAAGAAACCCAAAACCTTCAATTGGCAAGAACAGCGCAGACGGGATAGAGAACGGAAGCAACACGAAGAGGACGAACAGACATTGGCTAGAATAGAGGCTCCGATTCCACAATCCAACATTGGGTTTAAATTGTTGAAGCAGATGGGGTACACTCCCGGGGCAGCTTTGGGCAAGGAGGGATCCGGACTTGCAGAGCCTGTGGGACTTGAGATTCGACGGTCGCGAGCTGGAATTGGCAGGCAAGATCCGATTAAAGAGAAGGTGAAGCAAGAAGAGATTAGAGCTGAGAAAAAGAGGAGCCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGACAGAAGTTGCAATGGAGAAGTCGAAGAATTGTGGTCAATTACAACAAGGCCAAAGCAGCACTTGATCAATTGGAGAATAAGGAAGTTGTGGAGCCAGAGAAGGACAATGAGGAGGAAGGAGAACAAGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGTACAGTTCTTTTCTACAAACTTCACCATCCTCCACCCCCATTTAGTTTCAAATAAAGCTTCTCTGTTTTCTATGATATTGGTAGGTCATTGTTGATCATTTATTTGCATAATATGAAATTGATTTGCATTCTGAAGCTGGAGTTAGTTAAAATCATATTACCTTATAATTGACCATTGGCTTGCATAGTTTGAAATTGATTTGAGTTATAGAGAGGGTTTAGGGTTAGGCTTGTGATATTGGCCCCTCGTCAAGCTCTATGTTTTTCTTTAGGGGGACTAATTTTTTTTTTTTTTTTTTGGTATTGTACGTTAGGTCTTATTGTTATTGGCTTGAGTCCCTTCCTAGTGGGACTTCCTTTTCGTGGGCTTGTTTTTAGATGTCATTGTAATCTTCCATTCTTTCTGAATGAAAGTTCGATTACAATAGGAAAAAGGTAAACTTAGTAGCCTGTGGAGAGTTGCAGTTTTAGCATGAACTAAGTAGCAATGCTTTGGTAAAGGGAATGCCACAAATTCCTATCAAACTGTGGTGGTCTTTTTTTCCCATTTTAATGGGGTTTACAGGGTACTTCATTGTCAATGCTCTGATCAATTGAATGCCTTTCGTGACTTTTATTTCTTGGATCATTTTTCTTGACCGTTTATTGGAAGGGTCTGGTGGATGCTAATAAAGAAAAATCATCTGTAGGATGAAAATCTTGGTTGATGGAACCAGTTTTATTTAAGCCCCCTTTGATAACTATTCGGTTTTTTGAGTATTGAAAATTAAGCTTATAAATTATAAAGAACTCTACATCTACCAATTGATTTCTTCGTTTTGTTGTCTACCTTTTAGGAATGTTTTAAAAAACCAAGTCGAGTGTTGAAAACTGAAAAAACTAGCTGTTAAAGCCTTGTTTTTATTTTTGGAATTTAGCTAAGAATACAAATAGTTTTGTTTTTAGAATTAGGCTAATAATACAAATATATAGTTAGGAAGGATGATTACCATGGTAAATAAGTCTGTAAGAGAACATGCATAATCTTTACTAGCCGAGGGGAGATTTGAGAGCCTCCCACTACTCTTGTCTCCACCTAAAATGATTTAGTGATTGTTCAAAAGATACCCTCCTCGCAATTAACTTGCTAAACAACCCTACACAAACTTGGCCATCTAAATAACCGAATACCAAAGAAGCTCACACACATTACGTAGAGAGGAAACTTGTACACTTCAATAACTTTAAAACTCAAAGACCCATTGTACAACCTTAATAACAATTGAAATGATGTTTAAGTAAATCTGTTATAACAAAATTAAGTTTTATCATTTATGTGCATTCAATATCTTTTATGATGAGACTCCTTTTCTAGACATAATAACCTGCCTGTCAGGCCGTTACACCATAATCTCACTCTATTTAAATCAAATGAGCTTTTGCTTGGGAATTGGAATAAAATATTCTTGTGATGGATCCAGGATTTGGAGGATATTTTGATGAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGGTGAGTGTATTACACCATTCTTTAAAGAGAATTTGTTCAAGCATGTGGCATTTTACTTACCATAACATCATTCTGCTGTTGATGCCAGTACGACTCAATGGATTCCCTCCTATCTAACTGCCCTGGAATTAGTGAAGATGATCACTGAACTAATTTCCTTTCCCTCCAAACGGTTTGCCGGAGATGGGATTTTTGGAAGTTGGCCCAATGGAAGAACCACCATAAAATAAACAAGGACATAGCGTAATCCATGAAGTGCTTAAAACGGTGCTTTTAGGTACTTTTAGATCATCCCTACCATGTCCATTGTTGTTAACGAGTCCCCCCTTCCTATCGAGGGTTGCATCATGTGCTTTAGTGTGCCTTTTTTGTCAACGTTTTCAACACAAACGGCGTAGTCTCTCAGAAAGCAATCCGATCTGAAGTTGCTGTTCGGAAGTCAGAATAGCAATGCTCCACTTCTAGAATTACTTATCCTAGTCAATGGATAGCCGGACATTGAGCAAGTTTGTTCAGATTGAGGCATAGAAGTAGGAGTTCAGAACACCAAGTCTGCTTTATACAATCATTACTTGGGCCAAGCTCCTTCCTATTTGTGTCCCTTTTAGTGCAAAATATAAGAGAATTTGAAAGGTAATGTTGGATTTGAGTTTCCTGACAGCGACTCGCACAAATTTGGCGGGTAAGTTTTCTGTGAAGTTAATGTTGAATATTCTTTAGAAGGGTA ATAGATAGATCGGCTTTCAGCACCTAAGCGTGTATTGGCCTGAACTCAATACCATATTTTTGTCCCAAGCTATGGCGGAATCGGATTTCAGGCAAACCAATGAACCAGACGAAGAAGAAGAAGACTACATGGGCGACCTCTCTAAGTTGCTTCCTCCAGACGATACTACCTCTTCCAAATCCATATTCAGAAAGGTTGCTGCTAATAAAACCCCTGTTGTCCAATCATCGAATAAGAAACCCAAAACCTTCAATTGGCAAGAACAGCGCAGACGGGATAGAGAACGGAAGCAACACGAAGAGGACGAACAGACATTGGCTAGAATAGAGGCTCCGATTCCACAATCCAACATTGGGTTTAAATTGTTGAAGCAGATGGGGTACACTCCCGGGGCAGCTTTGGGCAAGGAGGGATCCGGACTTGCAGAGCCTGTGGGACTTGAGATTCGACGGTCGCGAGCTGGAATTGGCAGGCAAGATCCGATTAAAGAGAAGGTGAAGCAAGAAGAGATTAGAGCTGAGAAAAAGAGGAGCCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGACAGAAGTTGCAATGGAGAAGTCGAAGAATTGTGGTCAATTACAACAAGGCCAAAGCAGCACTTGATCAATTGGAGAATAAGGAAGTTGTGGAGCCAGAGAAGGACAATgaggaggaaggagaacaagaagaagaagaggaagaGATTATAACAGAAGAGGATTTGGAGGATATTTTGATGAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGTACGACTCAATGGATTCCCTCCTATCTAACTGCCCTGGAATTAGTGAAGATGATCACTGAACTAATTTCCTTTCCCTCCAAACGGTTTGCCGGAGATGGGATTTTTGGAAGTTGGCCCAATGGAAGAACCACCATAAAATAAACAAGGACATAGCGTAATCCATGAAGTGCTTAAAACGGTGCTTTTAGGTACTTTTAGATCATCCCTACCATGTCCATTGTTGTTAACGAGTCCCCCCTTCCTATCGAGGGTTGCATCATGTGCTTTAGTGTGCCTTTTTTGTCAACGTTTTCAACACAAACGGCGTAGTCTCTCAGAAAGCAATCCGATCTGAAGTTGCTGTTCGGAAGTCAGAATAGCAATGCTCCACTTCTAGAATTACTTATCCTAGTCAATGGATAGCCGGACATTGAGCAAGTTTGTTCAGATTGAGGCATAGAAGTAGGAGTTCAGAACACCAAGTCTGCTTTATACAATCATTACTTGGGCCAAGCTCCTTCCTATTTGTGTCCCTTTTAGTGCAAAATATAAGAGAATTTGAAAGGTAATGTTGGATTTGAGTTTCCTGACAGCGACTCGCACAAATTTGGCGGGTAAGTTTTCTGTGAAGTTAATGTTGAATATTCTTTAGAAGGGTA ATGGCGGAATCGGATTTCAGGCAAACCAATGAACCAGACGAAGAAGAAGAAGACTACATGGGCGACCTCTCTAAGTTGCTTCCTCCAGACGATACTACCTCTTCCAAATCCATATTCAGAAAGGTTGCTGCTAATAAAACCCCTGTTGTCCAATCATCGAATAAGAAACCCAAAACCTTCAATTGGCAAGAACAGCGCAGACGGGATAGAGAACGGAAGCAACACGAAGAGGACGAACAGACATTGGCTAGAATAGAGGCTCCGATTCCACAATCCAACATTGGGTTTAAATTGTTGAAGCAGATGGGGTACACTCCCGGGGCAGCTTTGGGCAAGGAGGGATCCGGACTTGCAGAGCCTGTGGGACTTGAGATTCGACGGTCGCGAGCTGGAATTGGCAGGCAAGATCCGATTAAAGAGAAGGTGAAGCAAGAAGAGATTAGAGCTGAGAAAAAGAGGAGCCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGACAGAAGTTGCAATGGAGAAGTCGAAGAATTGTGGTCAATTACAACAAGGCCAAAGCAGCACTTGATCAATTGGAGAATAAGGAAGTTGTGGAGCCAGAGAAGGACAATGAGGAGGAAGGAGAACAAGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGATTTGGAGGATATTTTGATGAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGTACGACTCAATGGATTCCCTCCTATCTAACTGCCCTGGAATTAGTGAAGATGATCACTGA MAESDFRQTNEPDEEEEDYMGDLSKLLPPDDTTSSKSIFRKVAANKTPVVQSSNKKPKTFNWQEQRRRDRERKQHEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGRQDPIKEKVKQEEIRAEKKRSHQEALMEEFGSRQKLQWRSRRIVVNYNKAKAALDQLENKEVVEPEKDNEEEGEQEEEEEEIITEEDLEDILMKLRDEHRYCLFCGYQYDSMDSLLSNCPGISEDDH*
BLAST of Cucsa.242800 vs. Swiss-Prot
Match: GPT11_MOUSE (G patch domain-containing protein 11 OS=Mus musculus GN=Gpatch11 PE=1 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 3.1e-27 Identity = 78/269 (29.00%), Postives = 134/269 (49.81%), Query Frame = 1
BLAST of Cucsa.242800 vs. Swiss-Prot
Match: GPT11_BOVIN (G patch domain-containing protein 11 OS=Bos taurus GN=GPATCH11 PE=2 SV=2) HSP 1 Score: 123.2 bits (308), Expect = 4.1e-27 Identity = 83/272 (30.51%), Postives = 138/272 (50.74%), Query Frame = 1
BLAST of Cucsa.242800 vs. Swiss-Prot
Match: GPT11_HUMAN (G patch domain-containing protein 11 OS=Homo sapiens GN=GPATCH11 PE=1 SV=3) HSP 1 Score: 122.1 bits (305), Expect = 9.1e-27 Identity = 81/268 (30.22%), Postives = 141/268 (52.61%), Query Frame = 1
BLAST of Cucsa.242800 vs. Swiss-Prot
Match: GPT11_DANRE (G patch domain-containing protein 11 OS=Danio rerio GN=gpatch11 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.0e-26 Identity = 82/275 (29.82%), Postives = 141/275 (51.27%), Query Frame = 1
BLAST of Cucsa.242800 vs. Swiss-Prot
Match: GPT11_XENTR (G patch domain-containing protein 11 OS=Xenopus tropicalis GN=gpatch11 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.0e-25 Identity = 75/269 (27.88%), Postives = 133/269 (49.44%), Query Frame = 1
BLAST of Cucsa.242800 vs. TrEMBL
Match: A0A0A0LGZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809920 PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 1.2e-145 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1
BLAST of Cucsa.242800 vs. TrEMBL
Match: B9II12_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s04900g PE=4 SV=2) HSP 1 Score: 364.8 bits (935), Expect = 8.9e-98 Identity = 182/266 (68.42%), Postives = 221/266 (83.08%), Query Frame = 1
BLAST of Cucsa.242800 vs. TrEMBL
Match: A0A067JL26_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25518 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 4.9e-96 Identity = 173/246 (70.33%), Postives = 207/246 (84.15%), Query Frame = 1
BLAST of Cucsa.242800 vs. TrEMBL
Match: B9T273_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0413680 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 6.4e-96 Identity = 181/260 (69.62%), Postives = 212/260 (81.54%), Query Frame = 1
BLAST of Cucsa.242800 vs. TrEMBL
Match: A0A0D2NSP6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G141900 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 6.0e-94 Identity = 172/248 (69.35%), Postives = 209/248 (84.27%), Query Frame = 1
BLAST of Cucsa.242800 vs. TAIR10
Match: AT3G57910.1 (AT3G57910.1 D111/G-patch domain-containing protein) HSP 1 Score: 317.0 bits (811), Expect = 1.1e-86 Identity = 158/252 (62.70%), Postives = 204/252 (80.95%), Query Frame = 1
BLAST of Cucsa.242800 vs. TAIR10
Match: AT5G26610.1 (AT5G26610.1 D111/G-patch domain-containing protein) HSP 1 Score: 55.1 bits (131), Expect = 7.7e-08 Identity = 37/109 (33.94%), Postives = 57/109 (52.29%), Query Frame = 1
BLAST of Cucsa.242800 vs. TAIR10
Match: AT5G08535.1 (AT5G08535.1 D111/G-patch domain-containing protein) HSP 1 Score: 52.0 bits (123), Expect = 6.5e-07 Identity = 26/76 (34.21%), Postives = 42/76 (55.26%), Query Frame = 1
BLAST of Cucsa.242800 vs. TAIR10
Match: AT3G54230.2 (AT3G54230.2 suppressor of abi3-5) HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 1
BLAST of Cucsa.242800 vs. NCBI nr
Match: gi|449437595|ref|XP_004136577.1| (PREDICTED: G patch domain-containing protein 11 [Cucumis sativus]) HSP 1 Score: 523.9 bits (1348), Expect = 1.7e-145 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1
BLAST of Cucsa.242800 vs. NCBI nr
Match: gi|659084788|ref|XP_008443073.1| (PREDICTED: G patch domain-containing protein 11 [Cucumis melo]) HSP 1 Score: 513.8 bits (1322), Expect = 1.7e-142 Identity = 255/260 (98.08%), Postives = 258/260 (99.23%), Query Frame = 1
BLAST of Cucsa.242800 vs. NCBI nr
Match: gi|1009161533|ref|XP_015898950.1| (PREDICTED: G patch domain-containing protein 11 [Ziziphus jujuba]) HSP 1 Score: 384.0 bits (985), Expect = 2.0e-103 Identity = 196/262 (74.81%), Postives = 221/262 (84.35%), Query Frame = 1
BLAST of Cucsa.242800 vs. NCBI nr
Match: gi|566208757|ref|XP_002323290.2| (hypothetical protein POPTR_0016s04900g [Populus trichocarpa]) HSP 1 Score: 364.8 bits (935), Expect = 1.3e-97 Identity = 182/266 (68.42%), Postives = 221/266 (83.08%), Query Frame = 1
BLAST of Cucsa.242800 vs. NCBI nr
Match: gi|743869328|ref|XP_011033247.1| (PREDICTED: G patch domain-containing protein 11 [Populus euphratica]) HSP 1 Score: 361.7 bits (927), Expect = 1.1e-96 Identity = 178/259 (68.73%), Postives = 218/259 (84.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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