Cucsa.235820 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.235820
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionAuxin-responsive protein
Locationscaffold02012 : 579827 .. 581501 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTTTCTTATTACTTTATCATCTACTTCTAACCTTCTATATATATGTGTGTGTGTATATATATATATAATATGAAATGAAAACCACACACCAAACAATTTTAATTCATTTCAAATCAAACCATTTTCTCTCAGGCAGAGCAACATATTATATGTTATGTCGTCCTCCGAGACACTTCCGGAGTCGCCCCAATCTGATTTGACTCAAATCAATTTCGATGAAACTGAGCTCACATTGGGACTTCCCGGAGCCGAGTTCCGGCCAACAACTGATCATAAATCCAACGCCAAACGTTGTTTCCATGACACTGTTGATGCCGATGTCGGGAGCTCGACAAGCAAACCGCGTGACAGTCTTGATGATGAGCCACCCCATGGCTCTTCTGGAAATGGTACGTTTCGATATGTATACGGCTCTGATTGAGTATGGCAATTAAAATTTTTATGTATCTTTGGTTGTTCATATATTGAAAGGTAGATTATTAATATATATGAATATATTATAGAGGAAAAGCGGGCAGTGATGGGTTGGCCACCGGTGAGATCATACAGAAAAAGGACAATAGAAATGAACAGCACAACTACTACTAAGTACGTTAAAGTTGGGGCTGATGGTGCGCCATATCTGCGTAAGCTTGACCTTCAGATCTTCAATGGCTACCATCAACTATTTAACGCTTTACACCATTTGTTTACCTCCTTCCCTATTTCTTGTGAGTACTCACAATAATACATAATTCCGATCTCTTTCTTTATTATTATTATAAATCTTTTCTTAACTTCAACAATAAATATGATACGTCTCTAACTCGGTACTAACTAGTCAGATGTGTCTTTGTCTATTAAGCTATGTGTATATAATTAATAGTGTGACTGCATTTAACAACATCATTGTAGTTAACTTAACTAGATCAAGAATATATCGAGTAGTAAAATTCATCCAACTCTAATTTAAGTTATATTTTATAAGATTTTGAATTTAAATTATAATTTAACGCACGATAAATTATATCATAGGTGATTACTTAGAAGGAGGAAGCAATTTGAACCCAGCTGTGAAAAGAGCAGATGAATACTTACCAACTTATGAAGATAAAGATGGAGATTGGATGTTAGTAGGAGATGTCCCTTGGAAGTAAGTTTAATTATTATTACCATAACTTTCAATTTCATCTTATTTAACTAATTATTATTAATAATTAACCTTCTTCAATTTGCCTCAGCTTCTAATTAATTACAAACTTTCAAAATGTGCAGATTATTCATTGAATCATGCAAACGTATtCGTTTGATGAAAGGTTCAGATGCCATTGGCACCCGTAAGTCTTATTTTGTTTTAGGGCTTGAGATTCTTTTAAAGATAACTTCCCAAGTGGGATTTTGTTAATTAATTTATGAGTTTGTTGTTCACTTAATTATGTGCAGCTTCAAGAACACCATAAAGAAAAGGAAAGGGGAGGAAGGGAGAGAGAGGTTTTGGATGTGGGCAGCTTTACTTTTTGAATTTGTTCTAAGTATTGAATGAATATAATATGCCCCTTTTGATGTGATTAGGCTTTTGTTAATTTTGTATAATAAAAAaGTAATATTTACCTAACTGCAGTTTGTTGTTGTTGTTGTACAGTTGTTAACATGGCTTAAAGTGCTCAAATATTAATCACTTGTTTATAAGTCCT

mRNA sequence

CTCTTTCTTATTACTTTATCATCTACTTCTAACCTTCtatatatatgtgtgtgtgtatatatatatataATATGAAATGAAAACCACACACCAAACAATTTTAATTCATTTCAAATCAAACCATTTTCTCTCAGGCAGAGCAACATATTATATGTTATGTCGTCCTCCGAGACACTTCCGGAGTCGCCCCAATCTGATTTGACTCAAATCAATTTCGATGAAACTGAGCTCACATTGGGACTTCCCGGAGCCGAGTTCCGGCCAACAACTGATCATAAATCCAACGCCAAACGTTGTTTCCATGACACTGTTGATGCCGATGTCGGGAGCTCGACAAGCAAACCGCGTGACAGTCTTGATGATGAGCCACCCCATGGCTCTTCTGGAAATGAGGAAAAGCGGGCAGTGATGGGTTGGCCACCGGTGAGATCATACAGAAAAAGGACAATAGAAATGAACAGCACAACTACTACTAAGTACGTTAAAGTTGGGGCTGATGGTGCGCCATATCTGCGTAAGCTTGACCTTCAGATCTTCAATGGCTACCATCAACTATTTAACGCTTTACACCATTTGTTTACCTCCTTCCCTATTTCTTGTGATTACTTAGAAGGAGGAAGCAATTTGAACCCAGCTGTGAAAAGAGCAGATGAATACTTACCAACTTATGAAGATAAAGATGGAGATTGGATGTTAGTAGGAGATGTCCCTTGGAAATTATTCATTGAATCATGCAAACGTATTCGTTTGATGAAAGGTTCAGATGCCATTGGCACCCCTTCAAGAACACCATAAAGAAAAGGAAAGGGGAGGAAGGGAGAGAGAGGTTTTGGATGTGGGCAGCTTTACTTTTTGAATTTGTTCTAAGTATTGAATGAATATAATATGCCCCTTTTGATGTGATTAGGCTTTTGTTAATTTTGTATAATAAAAAAGTAATATTTACCTAACTGCAGTTTGTTGTTGTTGTTGTACAGTTGTTAACATGGCTTAAAGTGCTCAAATATTAATCACTTGTTTATAAGTCCT

Coding sequence (CDS)

ATGTCGTCCTCCGAGACACTTCCGGAGTCGCCCCAATCTGATTTGACTCAAATCAATTTCGATGAAACTGAGCTCACATTGGGACTTCCCGGAGCCGAGTTCCGGCCAACAACTGATCATAAATCCAACGCCAAACGTTGTTTCCATGACACTGTTGATGCCGATGTCGGGAGCTCGACAAGCAAACCGCGTGACAGTCTTGATGATGAGCCACCCCATGGCTCTTCTGGAAATGAGGAAAAGCGGGCAGTGATGGGTTGGCCACCGGTGAGATCATACAGAAAAAGGACAATAGAAATGAACAGCACAACTACTACTAAGTACGTTAAAGTTGGGGCTGATGGTGCGCCATATCTGCGTAAGCTTGACCTTCAGATCTTCAATGGCTACCATCAACTATTTAACGCTTTACACCATTTGTTTACCTCCTTCCCTATTTCTTGTGATTACTTAGAAGGAGGAAGCAATTTGAACCCAGCTGTGAAAAGAGCAGATGAATACTTACCAACTTATGAAGATAAAGATGGAGATTGGATGTTAGTAGGAGATGTCCCTTGGAAATTATTCATTGAATCATGCAAACGTATtCGTTTGATGAAAGGTTCAGATGCCATTGGCACCCCTTCAAGAACACCATAA

Protein sequence

MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSSTSKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP*
Homology
[Close]
BLAST of Cucsa.235820 vs. Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 99/233 (42.49%), Postives = 125/233 (53.65%), Query Frame = 1 

Query: 18  INFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVG-SSTSKPRDSLDD------- 77
           INF+ TEL LGLPG         K+N KR F +TVD  +  SST+    S  D       
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 78  --EPPHGSSGNEEKRAVMGWPPVRSYRKR-------------------------TIEMNS 137
             +PP        K  V+GWPPVRS+RK                          T   ++
Sbjct: 62  VVKPP-------AKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASA 121

Query: 138 TTTTKYVKVGADGAPYLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVK 197
             T  YVKV  DGAPYLRK+DL+++  Y  L NAL  +F+SF I     +G  +     K
Sbjct: 122 CATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESK 181

Query: 198 RAD-----EYLPTYEDKDGDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSR 211
             D     +Y+PTYEDKDGDWMLVGDVPW++F++SCKRIR+MKGS+AIG   R
Sbjct: 182 LIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPR 227

[Close]
BLAST of Cucsa.235820 vs. Swiss-Prot
Match: IAA1_ORYSJ (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-36
Identity = 92/212 (43.40%), Postives = 120/212 (56.60%), Query Frame = 1 

Query: 3   SSETLPESPQSDLTQ-INFDETELTLGLPG---AEFRPTTDHKSNAKRCFHDTVDADVGS 62
           S ET   S +S     ++F++T LTL LPG   A   P  D K ++      + DA   +
Sbjct: 2   SVETERSSTESSAASGLDFEDTALTLRLPGSLAAAAAPDPDRKRSSP----SSSDAADAA 61

Query: 63  STSKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPY 122
             S P  +  D PP        K  V+GWPPVRS+RK  +        K+VKV  DGAPY
Sbjct: 62  DNSSPLAAAADAPP------APKARVVGWPPVRSFRKNAL------AAKFVKVAVDGAPY 121

Query: 123 LRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDW 182
           LRK+DL+ ++GY QL  AL   F S      + +    L  AV    EY+PTYEDKDGDW
Sbjct: 122 LRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVN-GTEYVPTYEDKDGDW 181

Query: 183 MLVGDVPWKLFIESCKRIRLMKGSDAIGTPSR 211
           MLVGDVPWK+F+E+C+R+RLMK S+A+    R
Sbjct: 182 MLVGDVPWKMFVETCQRLRLMKSSEAVNLAPR 196

[Close]
BLAST of Cucsa.235820 vs. Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-36
Identity = 92/216 (42.59%), Postives = 117/216 (54.17%), Query Frame = 1 

Query: 1   MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST 60
           MS+S     SP   ++ +++D+T LTL LPG+    ++      KR  H           
Sbjct: 1   MSTSSGADSSPP--VSGLDYDDTALTLALPGSSSSSSSTADPERKRAAH----------- 60

Query: 61  SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR 120
               D  D +PP        K   +GWPPVR+YR+  +  +S    K VKV  DGAPYLR
Sbjct: 61  ---ADHADAKPP------SPKARAVGWPPVRAYRRNALREDSARA-KLVKVAVDGAPYLR 120

Query: 121 KLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLN-PAVKRAD-----EYLPTYEDK 180
           K+DL    GY  L  ALH +F S    C  + GG   +    K  D     EY+PTYEDK
Sbjct: 121 KVDLAAHAGYAPLLRALHGMFAS----CLAVRGGGGGDGEGTKLVDLVTGAEYVPTYEDK 180

Query: 181 DGDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSR 211
           DGDWMLVGDVPWK+F+ESCKRIRLMK S+A+    R
Sbjct: 181 DGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189

[Close]
BLAST of Cucsa.235820 vs. Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 5.1e-36
Identity = 93/224 (41.52%), Postives = 121/224 (54.02%), Query Frame = 1 

Query: 17  QINFDETELTLGLPGAE-----------FRPTTDHKSNAKR--------CFHDTVDADVG 76
           ++N  ETEL LGLPG +           F  T D K N             HD V  D  
Sbjct: 6   ELNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFDSK 65

Query: 77  SSTSKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTI-----EMNSTTTTKYVKVG 136
             ++ P+D    +PP        K  V+GWPPVRSYRK  +              +VKV 
Sbjct: 66  EKSACPKDPA--KPP-------AKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVKVS 125

Query: 137 ADGAPYLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGS-NLNPAVKRAD-----E 196
            DGAPYLRK+DL+++  Y +L NAL ++F+SF +     E G  +     K  D     +
Sbjct: 126 MDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWD 185

Query: 197 YLPTYEDKDGDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSR 211
           Y+P+YEDKDGDWMLVGDVPW +F+++CKR+RLMKGSDAIG   R
Sbjct: 186 YVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPR 220

[Close]
BLAST of Cucsa.235820 vs. Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35
Identity = 91/222 (40.99%), Postives = 122/222 (54.95%), Query Frame = 1 

Query: 18  INFDETELTLGLPGAEFRPTTDHKSNA--KRCFHDTVDADVGSSTSK-----------PR 77
           +N  ETEL LGLPG      +  KS    KR F +TVD  +   ++K           P+
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 78  DSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTT-----------TTKYVKVGA 137
           +    + P   S    K  V+GWPPVR+YRK  +    +            T  +VKV  
Sbjct: 61  EKTFLKDP---SKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSM 120

Query: 138 DGAPYLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRAD-----EYL 197
           DGAPYLRK+DL+++  Y  L +AL  +F+SF +     +G  +     K  D     EY+
Sbjct: 121 DGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYV 180

Query: 198 PTYEDKDGDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSR 211
           P+YEDKDGDWMLVGDVPW +F+ESCKR+R+MKGS+AIG   R
Sbjct: 181 PSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPR 219

[Close]
BLAST of Cucsa.235820 vs. TrEMBL
Match: A0A0A0LUB1_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G397130 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 5.1e-99
Identity = 184/212 (86.79%), Postives = 184/212 (86.79%), Query Frame = 1 

Query: 1   MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST 60
           MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST
Sbjct: 1   MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST 60

Query: 61  SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR 120
           SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR
Sbjct: 61  SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR 120

Query: 121 KLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDWML 180
                                       DYLEGGSNLNPAVKRADEYLPTYEDKDGDWML
Sbjct: 121 ----------------------------DYLEGGSNLNPAVKRADEYLPTYEDKDGDWML 180

Query: 181 VGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 213
           VGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP
Sbjct: 181 VGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 184

[Close]
BLAST of Cucsa.235820 vs. TrEMBL
Match: A9PE61_POPTR (Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0001s17770g PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-45
Identity = 98/208 (47.12%), Postives = 133/208 (63.94%), Query Frame = 1 

Query: 12  QSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSSTSKPRD------ 71
           +SD   ++F ETELTLGLPG         K++ KR F +TVD ++G S++   D      
Sbjct: 11  ESDAANVSFKETELTLGLPGESRGLALIEKTSGKRGFLETVDLNLGRSSNVDSDHNKYSG 70

Query: 72  SLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLRKLDLQ 131
             + + P+ +     K  V+GWPPVR+YRK     N+  + KYVKV  DGAPYLRK+DL+
Sbjct: 71  ESETDVPNTAKPPAAKAQVVGWPPVRAYRK-----NAMKSCKYVKVAVDGAPYLRKVDLE 130

Query: 132 IFNGYHQLFNALHHLFTSFPISC-DYLEGGSNLNPAVKRADEYLPTYEDKDGDWMLVGDV 191
           ++N Y QL NAL  +F+ F  +  +YL   + +   V    EY+PTYEDKDGDWM++GDV
Sbjct: 131 MYNSYQQLLNALQDMFSCFSFTIRNYLNERTIMEQEVNNGVEYVPTYEDKDGDWMMLGDV 190

Query: 192 PWKLFIESCKRIRLMKGSDAIGTPSRTP 213
           PWK+F+ESCKR+RLMK S+A G   RTP
Sbjct: 191 PWKMFVESCKRLRLMKSSEATGFAPRTP 213

[Close]
BLAST of Cucsa.235820 vs. TrEMBL
Match: L0ASX8_POPTO (Auxin-responsive protein OS=Populus tomentosa PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.6e-44
Identity = 97/208 (46.63%), Postives = 131/208 (62.98%), Query Frame = 1 

Query: 12  QSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSSTSKPRD------ 71
           +SD   ++F ETELTLGLPG         K++ KR F +TVD ++G S++   D      
Sbjct: 11  ESDAANVSFKETELTLGLPGESRGLALIEKTSGKRGFLETVDLNLGRSSNVDSDHHKYSG 70

Query: 72  SLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLRKLDLQ 131
             + + P+ +     K  V+GWPPVR+YRK     N+    KYVKV  DGAPYLRK+DL+
Sbjct: 71  ESETDVPNTAKPPAAKAQVVGWPPVRAYRK-----NAMKGCKYVKVAVDGAPYLRKVDLE 130

Query: 132 IFNGYHQLFNALHHLFTSFPISC-DYLEGGSNLNPAVKRADEYLPTYEDKDGDWMLVGDV 191
           ++N Y QL NAL  +F+ F  +  +YL   + +   V    EY+PTY DKDGDWM++GDV
Sbjct: 131 MYNSYQQLLNALQDMFSCFSFTIRNYLNERTIMEQEVNNGVEYVPTYGDKDGDWMMLGDV 190

Query: 192 PWKLFIESCKRIRLMKGSDAIGTPSRTP 213
           PWK+F+ESCKR+RLMK S+A G   RTP
Sbjct: 191 PWKMFVESCKRLRLMKSSEATGFAPRTP 213

[Close]
BLAST of Cucsa.235820 vs. TrEMBL
Match: D7TBU1_VITVI (Auxin-responsive protein OS=Vitis vinifera GN=VIT_11s0016g04490 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.9e-44
Identity = 105/215 (48.84%), Postives = 129/215 (60.00%), Query Frame = 1 

Query: 4   SETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVG--SSTS 63
           S T  +SP S  T ++  +TELTLGLPG         KS +KR + DTVD      S  S
Sbjct: 3   SNTADQSPDSGTTGMSLKDTELTLGLPGEAQVVIVGGKSCSKRGYSDTVDFRFRCCSGES 62

Query: 64  KPRDSLDDEPPHGSSGN----EEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAP 123
             +    D P    SG     + K  V+GWPPVRS RK+ ++     + KYVKV  DGAP
Sbjct: 63  SAKAEKVDWPGKEISGPGKAPDSKAQVVGWPPVRSVRKKALK-----SCKYVKVAVDGAP 122

Query: 124 YLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGD 183
           YLRK+DL++   Y QL  AL  +F  F IS + LE    +NP      EY+PTYEDKDGD
Sbjct: 123 YLRKVDLEVHRSYQQLLMALETMFDCFTISSNDLEESKIMNPV--NGAEYVPTYEDKDGD 182

Query: 184 WMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 213
           WMLVGDVPW +F+ESCKR+RLMK S+AIG   RTP
Sbjct: 183 WMLVGDVPWNMFVESCKRVRLMKSSEAIGLAPRTP 210

[Close]
BLAST of Cucsa.235820 vs. TrEMBL
Match: W9SFI1_9ROSA (Auxin-responsive protein OS=Morus notabilis GN=L484_019459 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.0e-43
Identity = 101/209 (48.33%), Postives = 134/209 (64.11%), Query Frame = 1 

Query: 3   SSETLPESPQSDLTQINFDETELTLGLPGAEFRPTT-DHKSNAKRCFHDTVDADVGSSTS 62
           S E    S +S+   +NF+ET+LTLGLPG    PT    KS  KR + DT+D +V SS+ 
Sbjct: 2   SKENGKHSLESNAAGLNFEETKLTLGLPGKTRGPTEIGAKSGTKRGYSDTIDLNVESSSQ 61

Query: 63  KPRDSLDD----EPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAP 122
           K  +S D+    +    S     K  V+GWPPVR+ RK  ++     + K++KVG DGAP
Sbjct: 62  KQSESDDNGVVIDEASASKPPPAKAQVVGWPPVRASRKNVMK-----SCKFIKVGLDGAP 121

Query: 123 YLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGD 182
           YLRK+DL+++N Y+QL  AL  +F+S     +YL     ++P      EYLPTYEDKDGD
Sbjct: 122 YLRKVDLEMYNSYNQLLTALQDMFSSCLTIRNYLNERKLMDPV--NGMEYLPTYEDKDGD 181

Query: 183 WMLVGDVPWKLFIESCKRIRLMKGSDAIG 207
           WMLVGDVPW +F+ESCKR+RLMK S+AIG
Sbjct: 182 WMLVGDVPWTMFVESCKRLRLMKRSEAIG 203

[Close]
BLAST of Cucsa.235820 vs. TAIR10
Match: AT3G04730.1 (AT3G04730.1 indoleacetic acid-induced protein 16)

HSP 1 Score: 161.4 bits (407), Expect = 6.2e-40
Identity = 99/233 (42.49%), Postives = 125/233 (53.65%), Query Frame = 1 

Query: 18  INFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVG-SSTSKPRDSLDD------- 77
           INF+ TEL LGLPG         K+N KR F +TVD  +  SST+    S  D       
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 78  --EPPHGSSGNEEKRAVMGWPPVRSYRKR-------------------------TIEMNS 137
             +PP        K  V+GWPPVRS+RK                          T   ++
Sbjct: 62  VVKPP-------AKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASA 121

Query: 138 TTTTKYVKVGADGAPYLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVK 197
             T  YVKV  DGAPYLRK+DL+++  Y  L NAL  +F+SF I     +G  +     K
Sbjct: 122 CATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESK 181

Query: 198 RAD-----EYLPTYEDKDGDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSR 211
             D     +Y+PTYEDKDGDWMLVGDVPW++F++SCKRIR+MKGS+AIG   R
Sbjct: 182 LIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPR 227

[Close]
BLAST of Cucsa.235820 vs. TAIR10
Match: AT1G04250.1 (AT1G04250.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 152.5 bits (384), Expect = 2.9e-37
Identity = 93/224 (41.52%), Postives = 121/224 (54.02%), Query Frame = 1 

Query: 17  QINFDETELTLGLPGAE-----------FRPTTDHKSNAKR--------CFHDTVDADVG 76
           ++N  ETEL LGLPG +           F  T D K N             HD V  D  
Sbjct: 6   ELNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTFDSK 65

Query: 77  SSTSKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTI-----EMNSTTTTKYVKVG 136
             ++ P+D    +PP        K  V+GWPPVRSYRK  +              +VKV 
Sbjct: 66  EKSACPKDPA--KPP-------AKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVKVS 125

Query: 137 ADGAPYLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGS-NLNPAVKRAD-----E 196
            DGAPYLRK+DL+++  Y +L NAL ++F+SF +     E G  +     K  D     +
Sbjct: 126 MDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWD 185

Query: 197 YLPTYEDKDGDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSR 211
           Y+P+YEDKDGDWMLVGDVPW +F+++CKR+RLMKGSDAIG   R
Sbjct: 186 YVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPR 220

[Close]
BLAST of Cucsa.235820 vs. TAIR10
Match: AT4G14550.1 (AT4G14550.1 indole-3-acetic acid inducible 14)

HSP 1 Score: 151.0 bits (380), Expect = 8.4e-37
Identity = 91/222 (40.99%), Postives = 122/222 (54.95%), Query Frame = 1 

Query: 18  INFDETELTLGLPGAEFRPTTDHKSNA--KRCFHDTVDADVGSSTSK-----------PR 77
           +N  ETEL LGLPG      +  KS    KR F +TVD  +   ++K           P+
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 78  DSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTT-----------TTKYVKVGA 137
           +    + P   S    K  V+GWPPVR+YRK  +    +            T  +VKV  
Sbjct: 61  EKTFLKDP---SKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSM 120

Query: 138 DGAPYLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRAD-----EYL 197
           DGAPYLRK+DL+++  Y  L +AL  +F+SF +     +G  +     K  D     EY+
Sbjct: 121 DGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYV 180

Query: 198 PTYEDKDGDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSR 211
           P+YEDKDGDWMLVGDVPW +F+ESCKR+R+MKGS+AIG   R
Sbjct: 181 PSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPR 219

[Close]
BLAST of Cucsa.235820 vs. TAIR10
Match: AT3G23050.1 (AT3G23050.1 indole-3-acetic acid 7)

HSP 1 Score: 147.5 bits (371), Expect = 9.3e-36
Identity = 88/233 (37.77%), Postives = 126/233 (54.08%), Query Frame = 1 

Query: 18  INFDETELTLGLPGAEFRPTTDHKS--NAKRCFHDTVD------------ADVGSSTSKP 77
           +N   TEL LGLPG      +  KS   +KR F +TVD             D+ + ++ P
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVP 65

Query: 78  RDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTT------------------ 137
           ++    + P   S    K  V+GWPPVR+YRK  +    T++                  
Sbjct: 66  KEKTTLKDP---SKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAA 125

Query: 138 -TKYVKVGADGAPYLRKLDLQIFNGYHQLFNALHHLFTSFPIS-------CDYLEGGSNL 197
               VKV  DGAPYLRK+DL+++  Y  L +AL  +F+SF +         D++     +
Sbjct: 126 GAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLM 185

Query: 198 NPAVKRADEYLPTYEDKDGDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSR 211
           N  +  + EY+P+YEDKDGDWMLVGDVPW++F+ESCKR+R+MKGS+A+G   R
Sbjct: 186 N--LLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPR 233

[Close]
BLAST of Cucsa.235820 vs. TAIR10
Match: AT1G04240.1 (AT1G04240.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 145.2 bits (365), Expect = 4.6e-35
Identity = 83/199 (41.71%), Postives = 112/199 (56.28%), Query Frame = 1 

Query: 18  INFDETELTLGLPGAEFRPTTDHK-----SNAKRCFHDTVDADVGSSTSKPRDSLDDEPP 77
           +N  ETEL LGLPG +       +     +N KR      + ++ SS+ K   S    PP
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETS----PP 64

Query: 78  HGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTK-----YVKVGADGAPYLRKLDLQIF 137
                   K  ++GWPPVRSYRK  I+     +       YVKV  DGAPYLRK+DL  +
Sbjct: 65  R-------KAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCY 124

Query: 138 NGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDWMLVGDVPWK 197
            GY +L  AL  +F  F +  +Y E          +  +++PTYEDKDGDWML+GDVPW+
Sbjct: 125 KGYSELLKALEVMF-KFSVG-EYFERDGY------KGSDFVPTYEDKDGDWMLIGDVPWE 184

Query: 198 LFIESCKRIRLMKGSDAIG 207
           +FI +CKR+R+MKGS+A G
Sbjct: 185 MFICTCKRLRIMKGSEAKG 184

[Close]
BLAST of Cucsa.235820 vs. NCBI nr
Match: gi|449464280|ref|XP_004149857.1| (PREDICTED: auxin-induced protein AUX22-like [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 2.3e-121
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST 60
           MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST
Sbjct: 1   MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST 60

Query: 61  SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR 120
           SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR
Sbjct: 61  SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR 120

Query: 121 KLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDWML 180
           KLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDWML
Sbjct: 121 KLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDWML 180

Query: 181 VGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 213
           VGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP
Sbjct: 181 VGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 212

[Close]
BLAST of Cucsa.235820 vs. NCBI nr
Match: gi|659126766|ref|XP_008463353.1| (PREDICTED: auxin-responsive protein IAA16-like [Cucumis melo])

HSP 1 Score: 393.3 bits (1009), Expect = 2.7e-106
Identity = 194/214 (90.65%), Postives = 201/214 (93.93%), Query Frame = 1 

Query: 1   MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDAD-VGSS 60
           MSSSET+P+SP+SD TQINFDETELTLGLPGAEFRPTT HKSNAKRCFHDTVDA  VGSS
Sbjct: 1   MSSSETVPDSPESDFTQINFDETELTLGLPGAEFRPTTHHKSNAKRCFHDTVDAGCVGSS 60

Query: 61  TSKPRD-SLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPY 120
           TSKPRD SLDDEP HGSSGN EKRAVMGWPPVRSYRK+TIEMNST+ TKYVKVGADGAPY
Sbjct: 61  TSKPRDISLDDEPQHGSSGNGEKRAVMGWPPVRSYRKKTIEMNSTSATKYVKVGADGAPY 120

Query: 121 LRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDW 180
           LRKLDLQIFNGY QLF+A HHLFTSFPISCDYLE G+NLNP VKRADEYLPTYEDKDGDW
Sbjct: 121 LRKLDLQIFNGYQQLFDAFHHLFTSFPISCDYLEEGNNLNP-VKRADEYLPTYEDKDGDW 180

Query: 181 MLVGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 213
           MLVGDVPWKLFIESCKRIRLMKGSDAIGT SRTP
Sbjct: 181 MLVGDVPWKLFIESCKRIRLMKGSDAIGTASRTP 213

[Close]
BLAST of Cucsa.235820 vs. NCBI nr
Match: gi|700210287|gb|KGN65383.1| (hypothetical protein Csa_1G397130 [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 7.2e-99
Identity = 184/212 (86.79%), Postives = 184/212 (86.79%), Query Frame = 1 

Query: 1   MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST 60
           MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST
Sbjct: 1   MSSSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSST 60

Query: 61  SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR 120
           SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR
Sbjct: 61  SKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPYLR 120

Query: 121 KLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDWML 180
                                       DYLEGGSNLNPAVKRADEYLPTYEDKDGDWML
Sbjct: 121 ----------------------------DYLEGGSNLNPAVKRADEYLPTYEDKDGDWML 180

Query: 181 VGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 213
           VGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP
Sbjct: 181 VGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 184

[Close]
BLAST of Cucsa.235820 vs. NCBI nr
Match: gi|719994593|ref|XP_010254225.1| (PREDICTED: auxin-responsive protein IAA1-like [Nelumbo nucifera])

HSP 1 Score: 199.1 bits (505), Expect = 7.6e-48
Identity = 108/214 (50.47%), Postives = 138/214 (64.49%), Query Frame = 1 

Query: 1   MSSSETLPESPQSDLTQINFDETELTLGLPG-AEFRPTTDHKSNAKRCFHDTVDADVGS- 60
           M  +ET    P+SD T +NF ETELTLGLPG A  +  T  K+N+KR F +TVD ++GS 
Sbjct: 1   MMLTETALNLPESDATGLNFKETELTLGLPGEARSQTETIAKNNSKRGFSETVDLNLGSC 60

Query: 61  STSKPRDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADGAPY 120
           S ++  D  + E    S     K  V+GWPPVRS+RK  ++     +  YVKV  DGAPY
Sbjct: 61  SKNRIEDQGESEVSGASKPPSSKAQVVGWPPVRSFRKNVLK-----SCTYVKVAVDGAPY 120

Query: 121 LRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKDGDW 180
           LRK+DL+ +  Y QL +AL  +FT F I  + L     ++P      EY+PTYEDKDGDW
Sbjct: 121 LRKVDLETYGSYQQLLSALEEMFTCFTIR-NVLNESKLMDPV--NGTEYVPTYEDKDGDW 180

Query: 181 MLVGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 213
           MLVGDVPWK+F+ SCKRIRLMK S+A+G   RTP
Sbjct: 181 MLVGDVPWKMFVASCKRIRLMKSSEAVGLAPRTP 206

[Close]
BLAST of Cucsa.235820 vs. NCBI nr
Match: gi|719980686|ref|XP_010249884.1| (PREDICTED: auxin-responsive protein IAA1 [Nelumbo nucifera])

HSP 1 Score: 193.4 bits (490), Expect = 4.2e-46
Identity = 104/217 (47.93%), Postives = 134/217 (61.75%), Query Frame = 1 

Query: 3   SSETLPESPQSDLTQINFDETELTLGLPGAEFRPTTDHKSNAKRCFHDTVDADVGSSTSK 62
           S ET    P+S++T +NF ETELTLGLPG           N+KR F +TVD ++GSS+S 
Sbjct: 2   SPETARNPPESEVTGLNFKETELTLGLPGESRTQAEIVSKNSKRGFSETVDLNLGSSSSS 61

Query: 63  P-------RDSLDDEPPHGSSGNEEKRAVMGWPPVRSYRKRTIEMNSTTTTKYVKVGADG 122
                    +  + E P        K  V+GWPPVRS+RK     N+  +  YVKV  DG
Sbjct: 62  ETRGRSQVEEQGESEAPCAGKPPASKAQVVGWPPVRSFRK-----NALKSCTYVKVAVDG 121

Query: 123 APYLRKLDLQIFNGYHQLFNALHHLFTSFPISCDYLEGGSNLNPAVKRADEYLPTYEDKD 182
           APYLRK+DL+ ++ Y QL +AL ++FT F I  + L     ++P      EY+PTYEDKD
Sbjct: 122 APYLRKVDLETYSSYQQLLSALENMFTCFTIR-NVLNERKLMDPV--NGTEYVPTYEDKD 181

Query: 183 GDWMLVGDVPWKLFIESCKRIRLMKGSDAIGTPSRTP 213
           GDWMLVGDVPWK+F+ SCKRIRLMK S+A+G    TP
Sbjct: 182 GDWMLVGDVPWKMFVASCKRIRLMKSSEAVGLAPGTP 210

The following BLAST results are available for this feature:
BLAST of Cucsa.235820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IAA16_ARATH1.1e-3842.49Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1[more]
IAA1_ORYSJ1.0e-3643.40Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1[more]
IAA23_ORYSJ3.9e-3642.59Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=... [more]
IAA17_ARATH5.1e-3641.52Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2[more]
IAA14_ARATH1.5e-3540.99Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2[more]
BLAST of Cucsa.235820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUB1_CUCSA5.1e-9986.79Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G397130 PE=3 SV=1[more]
A9PE61_POPTR1.1e-4547.12Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0001s17770g PE=2 SV=1[more]
L0ASX8_POPTO1.6e-4446.63Auxin-responsive protein OS=Populus tomentosa PE=3 SV=1[more]
D7TBU1_VITVI7.9e-4448.84Auxin-responsive protein OS=Vitis vinifera GN=VIT_11s0016g04490 PE=3 SV=1[more]
W9SFI1_9ROSA1.0e-4348.33Auxin-responsive protein OS=Morus notabilis GN=L484_019459 PE=3 SV=1[more]
BLAST of Cucsa.235820 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04730.16.2e-4042.49 indoleacetic acid-induced protein 16[more]
AT1G04250.12.9e-3741.52 AUX/IAA transcriptional regulator family protein[more]
AT4G14550.18.4e-3740.99 indole-3-acetic acid inducible 14[more]
AT3G23050.19.3e-3637.77 indole-3-acetic acid 7[more]
AT1G04240.14.6e-3541.71 AUX/IAA transcriptional regulator family protein[more]
BLAST of Cucsa.235820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464280|ref|XP_004149857.1|2.3e-121100.00PREDICTED: auxin-induced protein AUX22-like [Cucumis sativus][more]
gi|659126766|ref|XP_008463353.1|2.7e-10690.65PREDICTED: auxin-responsive protein IAA16-like [Cucumis melo][more]
gi|700210287|gb|KGN65383.1|7.2e-9986.79hypothetical protein Csa_1G397130 [Cucumis sativus][more]
gi|719994593|ref|XP_010254225.1|7.6e-4850.47PREDICTED: auxin-responsive protein IAA1-like [Nelumbo nucifera][more]
gi|719980686|ref|XP_010249884.1|4.2e-4647.93PREDICTED: auxin-responsive protein IAA1 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
IPR000270PB1_dom
IPR003311AUX_IAA
IPR003311AUX_IAA
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.235820.1Cucsa.235820.1mRNA
Cucsa.235820.2Cucsa.235820.2mRNA
Cucsa.235820.3Cucsa.235820.3mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 3..183
score: 5.8
NoneNo IPR availablePANTHERPTHR31734:SF34AUXIN-RESPONSIVE PROTEIN IAA15coord: 3..183
score: 5.8
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 102..172
score: 5.1